RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 OR8G2PQ6IF36 304 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 STX12Q86Y82 276 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 ASH1LQ9NR48 2969 aaKnown RBP9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 TPSG1Q9NRR2 321 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 TMEM14BQ9NUH8 114 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 FBN2P35556 2912 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 SHOXO15266 292 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 APOA2P02652 100 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 ARG1P05089 322 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 CNTFRP26992 372 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 SPCS3P61009 180 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 MRGPRG-AS1Q2M3A8 158 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 LHFPL4Q7Z7J7 247 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 PUSL1Q8N0Z8 303 aaKnown RBP9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 BEND2Q8NDZ0 799 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 HARBI1Q96MB7 349 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 MED9Q9NWA0 146 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 FOXA2Q9Y261 457 aaPredicted RBP9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 A0A1W2PPH5 198 aa9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 ZNF705EA8MWA4 302 aaPredicted RBP9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 FAM157AC9JC47 383 aa9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 E7EUB6 86 aa9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 GOSR1O95249 250 aa9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 HRASP01112 189 aa9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 EIF5AP63241 154 aaKnown RBP9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 SLC38A11Q08AI6 406 aa9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 PDLIM3Q53GG5 364 aaPredicted RBP9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 DHRS7BQ6IAN0 325 aaPredicted RBP9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 ZNF429Q86V71 674 aa9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 STPG2Q8N412 459 aa9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 RNF141Q8WVD5 230 aa9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 C17orf50Q8WW18 174 aa9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 LHX4Q969G2 390 aa9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 NUP50Q9UKX7 468 aa9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 OR51B2Q9Y5P1 312 aa9.9□□□□□ -0.82
AP003559.1-201ENST00000540906 SPG11Q96JI7 2443 aa9.9□□□□□ -0.83
AP003559.1-201ENST00000540906 NBPF19A0A087WUL8 3843 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 IGHV1-3A0A0C4DH29 117 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 IGHV4-61A0A0C4DH41 118 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 A0A1W2PPI3 338 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 ODF3BA8MYP8 253 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 M0R1W7 72 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 RRHO14718 337 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 SEC11BP0C7V7 166 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 PDLIM4P50479 330 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 PRRX1P54821 245 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 TOR2AQ5JU69 321 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 PXDC1Q5TGL8 231 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 CRYBG3Q68DQ2 2970 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 TMEM182Q6ZP80 229 aaPredicted RBP9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 VMO1Q7Z5L0 202 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 THNSL2Q86YJ6 484 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 PDPNQ86YL7 162 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 OR52E5Q8NH55 327 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 FLYWCH2Q96CP2 140 aaKnown RBP9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 RSG1Q9BU20 258 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 LPAR2Q9HBW0 351 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 WASHC3Q9Y3C0 194 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 STRAPQ9Y3F4 350 aaKnown RBP9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 TEX50A0A1B0GTY4 177 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 A0A1B0GW64 132 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 RNASEK-C17orf49H0YIS7 233 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 HOXB4P17483 251 aaPredicted RBP9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 PRTN3P24158 256 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 IL3RAP26951 378 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 ARHGDIBP52566 201 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 KRTAP10-9P60411 292 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 SRSF3P84103 164 aaKnown RBP9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 PJVKQ0ZLH3 352 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 HNF4GQ14541 408 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 ZNF266Q14584 549 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 C10orf55Q5SWW7 151 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 DYNAPQ8N1N2 210 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 OR11H6Q8NGC7 330 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 OSR1Q8TAX0 266 aaPredicted RBP9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 PCGF1Q9BSM1 259 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 SIRPDQ9H106 197 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 BET1LQ9NYM9 111 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 CACFD1Q9UGQ2 172 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 PFDN2Q9UHV9 154 aa9.89□□□□□ -0.83
AP003559.1-201ENST00000540906 USP9YO00507 2555 aaPredicted RBP9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 PLXNB1O43157 2135 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 IGHV4-30-2A0A087WSY4 118 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 IGHV2-70DA0A0C4DH43 119 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 UBE2L5PA0A1B0GUS4 154 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 CGB1A6NKQ9 187 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 A8MXK9 166 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 VWC2LB2RUY7 222 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 I3L521 148 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 ENSAO43768 121 aaKnown RBP9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 KBTBD11O94819 623 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 FGF2P09038 288 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 ATP5J2P56134 94 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 HSPE1P61604 102 aaKnown RBP9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 TPTE2P1Q5T6R2 138 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 BTNL8Q6UX41 500 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 Q6ZRG5 221 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 MOB3BQ86TA1 216 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 C10orf105Q8TEF2 133 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 PERPQ96FX8 193 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms