RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 LINC00311Q8N616 119 aa12.15□□□□□ -0.46
TSFM-207ENST00000540550 KPTNQ9Y664 436 aa12.15□□□□□ -0.46
TSFM-207ENST00000540550 TPRP12270 2363 aaKnown RBP12.15□□□□□ -0.47
TSFM-207ENST00000540550 A0A1W2PPH5 198 aa12.14□□□□□ -0.47
TSFM-207ENST00000540550 C9JQL5 133 aa12.14□□□□□ -0.47
TSFM-207ENST00000540550 H7C2Y5 167 aa12.14□□□□□ -0.47
TSFM-207ENST00000540550 VDAC2P45880 294 aaPredicted RBP12.14□□□□□ -0.47
TSFM-207ENST00000540550 TMEM41BQ5BJD5 291 aa12.14□□□□□ -0.47
TSFM-207ENST00000540550 AVPI1Q5T686 147 aa12.14□□□□□ -0.47
TSFM-207ENST00000540550 SPSB3Q6PJ21 355 aa12.14□□□□□ -0.47
TSFM-207ENST00000540550 OR9G1Q8NH87 305 aa12.14□□□□□ -0.47
TSFM-207ENST00000540550 PRNDQ9UKY0 176 aa12.14□□□□□ -0.47
TSFM-207ENST00000540550 KALRNO60229 2985 aa12.14□□□□□ -0.47
TSFM-207ENST00000540550 FAM157AC9JC47 383 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 IGHV1-8P0DP01 117 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 IL3RAP26951 378 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 ELLP55199 621 aaPredicted RBP12.13□□□□□ -0.47
TSFM-207ENST00000540550 HSPE1P61604 102 aaKnown RBP12.13□□□□□ -0.47
TSFM-207ENST00000540550 ZNF709Q8N972 641 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 ZNF596Q8TC21 504 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 TMEM186Q96B77 213 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 RBMXL1Q96E39 390 aaKnown RBP12.13□□□□□ -0.47
TSFM-207ENST00000540550 TIMD4Q96H15 378 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 TMEM14BQ9NUH8 114 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 KIAA1456Q9P272 454 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 OR51B2Q9Y5P1 312 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 A0A087X0M5 115 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 A0A1B0GX30 115 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 RBFOX3A6NFN3 312 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 GNLYP22749 145 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 RAB11AP62491 216 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 CCL20P78556 96 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 VWC2Q2TAL6 325 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 ABHD12Q8N2K0 398 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 OR8B3Q8NGG8 313 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 OSR1Q8TAX0 266 aaPredicted RBP12.13□□□□□ -0.47
TSFM-207ENST00000540550 NEU4Q8WWR8 484 aaPredicted RBP12.13□□□□□ -0.47
TSFM-207ENST00000540550 OR8B2Q96RD0 313 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 SCRT1Q9BWW7 348 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 RPRMQ9NS64 109 aa12.13□□□□□ -0.47
TSFM-207ENST00000540550 C17orf112F2Z3M2 114 aa12.12□□□□□ -0.47
TSFM-207ENST00000540550 F12P00748 615 aaPredicted RBP12.12□□□□□ -0.47
TSFM-207ENST00000540550 IGKV1-16P04430 117 aa12.12□□□□□ -0.47
TSFM-207ENST00000540550 UQCRFS1P47985 274 aa12.12□□□□□ -0.47
TSFM-207ENST00000540550 REG1BP48304 166 aa12.12□□□□□ -0.47
TSFM-207ENST00000540550 C11orf71Q6IPW1 123 aa12.12□□□□□ -0.47
TSFM-207ENST00000540550 ETV3LQ6ZN32 361 aa12.12□□□□□ -0.47
TSFM-207ENST00000540550 RAB1CQ92928 201 aa12.12□□□□□ -0.47
TSFM-207ENST00000540550 TMEM133Q9H2Q1 129 aa12.12□□□□□ -0.47
TSFM-207ENST00000540550 SMDT1Q9H4I9 107 aa12.12□□□□□ -0.47
TSFM-207ENST00000540550 VSIRQ9H7M9 311 aa12.12□□□□□ -0.47
TSFM-207ENST00000540550 MIOXQ9UGB7 285 aa12.12□□□□□ -0.47
TSFM-207ENST00000540550 TRAV1-1A0A0B4J248 108 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 H0YJW9 148 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 UPK2O00526 184 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 TSPAN4O14817 238 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 NUPL2O15504 423 aaKnown RBP12.11□□□□□ -0.47
TSFM-207ENST00000540550 OR5AN1Q8NGI8 311 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 NEIL1Q96FI4 390 aaPredicted RBP12.11□□□□□ -0.47
TSFM-207ENST00000540550 HARBI1Q96MB7 349 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 HINT2Q9BX68 163 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 SLC35B3Q9H1N7 401 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 FKBP11Q9NYL4 201 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 SMCO3A2RU48 225 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 MBP02144 154 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 AGAP20933 346 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 HNF4GQ14541 408 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 HAGHQ16775 308 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 ZNF787Q6DD87 383 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 ZNF841Q6ZN19 808 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 CENPVQ7Z7K6 275 aaPredicted RBP12.11□□□□□ -0.47
TSFM-207ENST00000540550 PDPNQ86YL7 162 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 TGIF2LXQ8IUE1 241 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 ITLN2Q8WWU7 325 aaPredicted RBP12.11□□□□□ -0.47
TSFM-207ENST00000540550 FLYWCH2Q96CP2 140 aaKnown RBP12.11□□□□□ -0.47
TSFM-207ENST00000540550 BET1LQ9NYM9 111 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 ZNF257Q9Y2Q1 563 aa12.11□□□□□ -0.47
TSFM-207ENST00000540550 DNASE2O00115 360 aaPredicted RBP12.1□□□□□ -0.47
TSFM-207ENST00000540550 KBTBD11O94819 623 aa12.1□□□□□ -0.47
TSFM-207ENST00000540550 IFNA4P05014 189 aa12.1□□□□□ -0.47
TSFM-207ENST00000540550 SOD3P08294 240 aa12.1□□□□□ -0.47
TSFM-207ENST00000540550 SAA1P0DJI8 122 aaPredicted RBP12.1□□□□□ -0.47
TSFM-207ENST00000540550 CD1BP29016 333 aa12.1□□□□□ -0.47
TSFM-207ENST00000540550 TMEM177Q53S58 311 aa12.1□□□□□ -0.47
TSFM-207ENST00000540550 LCN15Q6UWW0 184 aa12.1□□□□□ -0.47
TSFM-207ENST00000540550 SLC24A4Q8NFF2 622 aa12.1□□□□□ -0.47
TSFM-207ENST00000540550 LHX4Q969G2 390 aa12.1□□□□□ -0.47
TSFM-207ENST00000540550 RCC1LQ96I51 464 aaKnown RBP12.1□□□□□ -0.47
TSFM-207ENST00000540550 RARRES2Q99969 163 aa12.1□□□□□ -0.47
TSFM-207ENST00000540550 NABP2Q9BQ15 211 aa12.1□□□□□ -0.47
TSFM-207ENST00000540550 GGACTQ9BVM4 153 aa12.1□□□□□ -0.47
TSFM-207ENST00000540550 NPCDR1Q9BY65 106 aa12.1□□□□□ -0.47
TSFM-207ENST00000540550 PLEKHA3Q9HB20 300 aa12.1□□□□□ -0.47
TSFM-207ENST00000540550 RELNP78509 3460 aa12.1□□□□□ -0.47
TSFM-207ENST00000540550 ACACBO00763 2458 aa12.1□□□□□ -0.47
TSFM-207ENST00000540550 PPIAL4CA0A0B4J2A2 164 aa12.09□□□□□ -0.47
TSFM-207ENST00000540550 FAM74A7A6NL05 159 aa12.09□□□□□ -0.47
TSFM-207ENST00000540550 RRHO14718 337 aa12.09□□□□□ -0.47
TSFM-207ENST00000540550 LY6HO94772 140 aa12.09□□□□□ -0.47
TSFM-207ENST00000540550 IL6RP08887 468 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms