RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 PCSK4Q6UW60 755 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 C19orf35Q6ZS72 473 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 LINC01551Q86U37 167 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 C1orf147Q96MC9 270 aaPredicted RBP7.35□□□□□ -1.23
DDB1-217ENST00000540166 GJE1A6NN92 205 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 MT-ND6P03923 174 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 FOXL1Q12952 345 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 AMMECR1LQ6DCA0 310 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 ZNF818PQ6ZRF7 136 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 LYPD6Q86Y78 171 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 OR8I2Q8N0Y5 310 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 TMEM251Q8N6I4 163 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 ZNF525Q8N782 197 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 OR5D13Q8NGL4 314 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 ABHD3Q8WU67 409 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 GATAD1Q8WUU5 269 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 TMEM56Q96MV1 263 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 TMEM204Q9BSN7 226 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 TMEM56-RWDD3S4R434 201 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 IGHV1-69-2A0A0G2JMI3 117 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 TRAPPC2LH3BP13 241 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 DHHO43323 396 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 PSG2P11465 335 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 F2RP25116 425 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 COX19Q49B96 90 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 MRPL54Q6P161 138 aaKnown RBP7.34□□□□□ -1.23
DDB1-217ENST00000540166 FAM19A2Q8N3H0 131 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 PNKDQ8N490 385 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 QTRT1Q9BXR0 403 aaKnown RBP7.34□□□□□ -1.23
DDB1-217ENST00000540166 SEPSECSQ9HD40 501 aaKnown RBP7.34□□□□□ -1.23
DDB1-217ENST00000540166 POLQO75417 2590 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 PGPEP1LA6NFU8 196 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 CCL3P10147 92 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 SRIP30626 198 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 Q0VFX4 171 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 PRDX4Q13162 271 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 NINJ1Q92982 152 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 APOBEC3DQ96AK3 386 aaPredicted RBP7.34□□□□□ -1.23
DDB1-217ENST00000540166 LIN7CQ9NUP9 197 aaKnown RBP7.34□□□□□ -1.23
DDB1-217ENST00000540166 ELOVL5Q9NYP7 299 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 MTCH1Q9NZJ7 389 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 FBXL7Q9UJT9 491 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 HIVEP3Q5T1R4 2406 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 IGHV2-70DA0A0C4DH43 119 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 H0Y980 276 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 TMEM50AO95807 157 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 UCP1P25874 307 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 GABRA6Q16445 453 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 RPP25LQ8N5L8 163 aaKnown RBP7.34□□□□□ -1.23
DDB1-217ENST00000540166 MRPS16Q9Y3D3 137 aaKnown RBP7.34□□□□□ -1.23
DDB1-217ENST00000540166 ABCA12Q86UK0 2595 aa7.34□□□□□ -1.23
DDB1-217ENST00000540166 A0A1B0GV72 72 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 J3QR89 54 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 NDUFS8O00217 210 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 SLC17A3O00476 420 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 SH2D1BO14796 132 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 DEGS1O15121 323 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 PPBPP02775 128 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 GPX1P07203 203 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 PATE4P0C8F1 98 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 RAC2P15153 192 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 KCNMB1Q16558 191 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 SAMD13Q5VXD3 122 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 ST6GALNAC6Q969X2 333 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 LIME1Q9H400 295 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 PROCRQ9UNN8 238 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 IGKV3D-11A0A0A0MRZ8 115 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 GAGE12BA1L429 117 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 NPBWR2P48146 333 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 RAB31Q13636 194 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 TAAR6Q96RI8 345 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 PEF1Q9UBV8 284 aaKnown RBP7.33□□□□□ -1.24
DDB1-217ENST00000540166 FER1L5A0AVI2 2057 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 ROS1P08922 2347 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 SLC22A20A6NK97 555 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 ZNHIT1O43257 154 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 NAPSAO96009 420 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 FUT6P51993 359 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 ZNF726P1Q15940 193 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 SLC25A34Q6PIV7 304 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 MMD2Q8IY49 270 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 KCNS1Q96KK3 526 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 CHRDL1Q9BU40 450 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 AHRRA9YTQ3 701 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 ETV2O00321 342 aaPredicted RBP7.33□□□□□ -1.24
DDB1-217ENST00000540166 HS3ST1O14792 307 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 SCTP09683 121 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 RELBQ01201 579 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 Q8NA96 180 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 RDH5Q92781 318 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 C10orf35Q96D05 121 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 IL36BQ9NZH7 164 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 TAAR3PQ9P1P4 343 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 SSUH2Q9Y2M2 353 aa7.33□□□□□ -1.24
DDB1-217ENST00000540166 TRAV9-2A0A087WT02 112 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 TRBV9A0A0B4J1U6 114 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 ODAMA1E959 279 aa7.32□□□□□ -1.24
DDB1-217ENST00000540166 ZNF324O75467 553 aaPredicted RBP7.32□□□□□ -1.24
DDB1-217ENST00000540166 PGLYRP1O75594 196 aaPredicted RBP7.32□□□□□ -1.24
DDB1-217ENST00000540166 APCSP02743 223 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms