RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 hCG_38984A0A1B0GV85 526 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 MARCH11A6NNE9 402 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 TM2D1Q9BX74 207 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 IGKV1D-13A0A0B4J2D9 117 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 RPLP1P05386 114 aaKnown RBP8.44□□□□□ -1.06
TRAF1-202ENST00000540010 IGKV1-13P0DP09 117 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 DNM1P46Q6ZS02 220 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 C5orf24Q7Z6I8 188 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 ZDHHC16Q969W1 377 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 TMSB15BA0A087X1C1 80 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 COLCA2A8K830 154 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 IGLV3-1P01715 115 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 CBLN1P23435 193 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 BRS3P32247 399 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 SSTR5P35346 364 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 ATOH7Q8N100 152 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 RPEQ96AT9 228 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 RNF2Q99496 336 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 P2RX4Q99571 388 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 C1QTNF5Q9BXJ0 243 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 CISD1Q9NZ45 108 aaKnown RBP8.44□□□□□ -1.06
TRAF1-202ENST00000540010 IL19Q9UHD0 177 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 FREM1Q5H8C1 2179 aa8.44□□□□□ -1.06
TRAF1-202ENST00000540010 KBTBD11O94819 623 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 SOD3P08294 240 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 ZNF506Q5JVG8 444 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 CYTL1Q9NRR1 136 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 GLRX2Q9NS18 164 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 COL27A1Q8IZC6 1860 aaPredicted RBP8.43□□□□□ -1.06
TRAF1-202ENST00000540010 A0A1W2PN81 502 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 WNT9BO14905 357 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 ARL14EPLP0DKL9 152 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 UCP1P25874 307 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 NBL1P41271 181 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 CD81P60033 236 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 PQLC2Q6ZP29 291 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 FAM214BQ7L5A3 538 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 RNF24Q9Y225 148 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 WDFY3Q8IZQ1 3526 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 HPRT1P00492 218 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 GCGP01275 180 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 HOXA5P20719 270 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 ZNF600Q6ZNG1 722 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 C1orf147Q96MC9 270 aaPredicted RBP8.43□□□□□ -1.06
TRAF1-202ENST00000540010 NDFIP1Q9BT67 221 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 WFDC1Q9HC57 220 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 GOLT1BQ9Y3E0 138 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 FREM2Q5SZK8 3169 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 IGHV3-72A0A0B4J1Y9 119 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 CRYBB3P26998 211 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 MPV17P39210 176 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 HINT1P49773 126 aaPredicted RBP8.43□□□□□ -1.06
TRAF1-202ENST00000540010 TIMD4Q96H15 378 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 AAMDCQ9H7C9 122 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 ZNF71Q9NQZ8 489 aaPredicted RBP8.43□□□□□ -1.06
TRAF1-202ENST00000540010 WIPI2Q9Y4P8 454 aa8.43□□□□□ -1.06
TRAF1-202ENST00000540010 APCSP02743 223 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 COX5BP10606 129 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 GFI1BQ5VTD9 330 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 GTF2H5Q6ZYL4 71 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 LINC00596Q86U02 117 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 ADTRPQ96IZ2 230 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 IMMP2LQ96T52 175 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 MRPL18Q9H0U6 180 aaKnown RBP8.42□□□□□ -1.06
TRAF1-202ENST00000540010 GAL3ST2Q9H3Q3 398 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 FAM90A10PA6NDY2 464 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 FAM90A18PA6NE21 464 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 FAM90A16PA6NEW6 464 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 WIPF3A6NGB9 483 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 FAM90A20PA6NIJ5 464 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 FAM90A8PA6NJQ4 464 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 FAM90A7PA6NKC0 464 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 FAM90A22PA8MWA6 464 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 FAM90A12PA8MX19 464 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 FAM90A5PA8MXJ8 464 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 FAM90A23PA8MXZ1 464 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 P01737 135 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 CD55P08174 381 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 FAM90A15PP0C7V4 464 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 FAM90A13PP0C7W8 464 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 FAM90A14PP0C7W9 464 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 FAM90A24PP0C7X0 464 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 OR4F17Q8NGA8 305 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 CCL13Q99616 98 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 ZNF729A6NN14 1252 aaPredicted RBP8.42□□□□□ -1.06
TRAF1-202ENST00000540010 M0QZK8 103 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 GGCTO75223 188 aaKnown RBP8.42□□□□□ -1.06
TRAF1-202ENST00000540010 FAM87AP0C7U9 286 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 ADCYAP1P18509 176 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 S100A7P31151 101 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 INO80CQ6PI98 192 aaPredicted RBP8.42□□□□□ -1.06
TRAF1-202ENST00000540010 TMEM108Q6UXF1 575 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 ZNF645Q8N7E2 425 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 LINC00469Q8N7U9 141 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 OR51G1Q8NGK1 321 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 SSBP3Q9BWW4 388 aaPredicted RBP8.42□□□□□ -1.06
TRAF1-202ENST00000540010 GP6Q9HCN6 339 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 OR51B2Q9Y5P1 312 aa8.42□□□□□ -1.06
TRAF1-202ENST00000540010 ODAMA1E959 279 aa8.41□□□□□ -1.06
TRAF1-202ENST00000540010 ZNF503-AS2A6NEH8 195 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms