RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 WRBO00258 174 aa12.96□□□□□ -0.34
TRAF3-204ENST00000539721 UPK2O00526 184 aa12.96□□□□□ -0.34
TRAF3-204ENST00000539721 SLC25A17O43808 307 aa12.96□□□□□ -0.34
TRAF3-204ENST00000539721 CD5LO43866 347 aa12.96□□□□□ -0.34
TRAF3-204ENST00000539721 KBTBD11O94819 623 aa12.96□□□□□ -0.34
TRAF3-204ENST00000539721 FSHBP01225 129 aa12.96□□□□□ -0.34
TRAF3-204ENST00000539721 ID3Q02535 119 aa12.96□□□□□ -0.34
TRAF3-204ENST00000539721 PRSS54Q6PEW0 395 aa12.96□□□□□ -0.34
TRAF3-204ENST00000539721 QTRT1Q9BXR0 403 aaKnown RBP12.96□□□□□ -0.34
TRAF3-204ENST00000539721 MAGT1Q9H0U3 335 aa12.96□□□□□ -0.34
TRAF3-204ENST00000539721 MEGF9Q9H1U4 602 aa12.96□□□□□ -0.34
TRAF3-204ENST00000539721 RCL1Q9Y2P8 373 aaKnown RBP12.96□□□□□ -0.34
TRAF3-204ENST00000539721 SOX21Q9Y651 276 aaPredicted RBP12.96□□□□□ -0.34
TRAF3-204ENST00000539721 ZNF469Q96JG9 3925 aaPredicted RBP12.95□□□□□ -0.34
TRAF3-204ENST00000539721 ZANQ9Y493 2812 aa12.95□□□□□ -0.34
TRAF3-204ENST00000539721 C15orf61A6NNL5 157 aa12.95□□□□□ -0.34
TRAF3-204ENST00000539721 FAM90A26D6RGX4 464 aa12.95□□□□□ -0.34
TRAF3-204ENST00000539721 H0YIZ8 118 aa12.95□□□□□ -0.34
TRAF3-204ENST00000539721 IL6RP08887 468 aaPredicted RBP12.95□□□□□ -0.34
TRAF3-204ENST00000539721 FBP1P09467 338 aa12.95□□□□□ -0.34
TRAF3-204ENST00000539721 FAM106CPP0CH98 169 aa12.95□□□□□ -0.34
TRAF3-204ENST00000539721 SLC25A4P12235 298 aa12.95□□□□□ -0.34
TRAF3-204ENST00000539721 POLR2GP62487 172 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRAF3-204ENST00000539721 KRTAP1-1Q07627 177 aa12.95□□□□□ -0.34
TRAF3-204ENST00000539721 PSG5Q15238 335 aa12.95□□□□□ -0.34
TRAF3-204ENST00000539721 FAM120AOSQ5T036 256 aa12.95□□□□□ -0.34
TRAF3-204ENST00000539721 OR4A5Q8NH83 315 aa12.95□□□□□ -0.34
TRAF3-204ENST00000539721 GRPEL2Q8TAA5 225 aa12.95□□□□□ -0.34
TRAF3-204ENST00000539721 OR5AC2Q9NZP5 309 aa12.95□□□□□ -0.34
TRAF3-204ENST00000539721 SSSCA1O60232 199 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 DEDDO75618 318 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 TMEM11P17152 192 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 EBI3Q14213 229 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 MMDQ15546 238 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 FBLN7Q53RD9 439 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 THNSL2Q86YJ6 484 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 TEX45Q8NA69 505 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 TMEM167AQ8TBQ9 72 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 DCUN1D4Q92564 292 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 RNF126Q9BV68 326 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 HSPB7Q9UBY9 170 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 PRNDQ9UKY0 176 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 MYO9AB2RTY4 2548 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 SVEP1Q4LDE5 3571 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 NBR2O15453 112 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 SPDEFO95238 335 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 TNFRSF9Q07011 255 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 TEX29Q8N6K0 151 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 KIAA1456Q9P272 454 aa12.94□□□□□ -0.34
TRAF3-204ENST00000539721 METTL1Q9UBP6 276 aaKnown RBP12.94□□□□□ -0.34
TRAF3-204ENST00000539721 FOXA2Q9Y261 457 aaPredicted RBP12.94□□□□□ -0.34
TRAF3-204ENST00000539721 TET2Q6N021 2002 aaPredicted RBP12.93□□□□□ -0.34
TRAF3-204ENST00000539721 SYNGR2O43760 224 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 MED6O75586 246 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 IFNA17P01571 189 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 LYL1P12980 280 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 PVALBP20472 110 aaPredicted RBP12.93□□□□□ -0.34
TRAF3-204ENST00000539721 DYNLT3P51808 116 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 F2RL1P55085 397 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 PLGLAQ15195 96 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 AARDQ4LEZ3 155 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 ZNF546Q86UE3 836 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 ZNF429Q86V71 674 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 Q8N6K4 173 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 FBXL15Q9H469 300 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 RBKSQ9H477 322 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 YAE1D1Q9NRH1 226 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 TPSG1Q9NRR2 321 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 TMEM14BQ9NUH8 114 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 OR51B2Q9Y5P1 312 aa12.93□□□□□ -0.34
TRAF3-204ENST00000539721 E5RGE8 158 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 L7N2F9 121 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 RRHO14718 337 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 ARPC5O15511 151 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 CHST1O43916 411 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 CRYGBP07316 175 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 RPL8P62917 257 aaKnown RBP12.92□□□□□ -0.34
TRAF3-204ENST00000539721 VAMP2P63027 116 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 LRRC75BQ2VPJ9 315 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 BCL6BQ8N143 479 aaPredicted RBP12.92□□□□□ -0.34
TRAF3-204ENST00000539721 NPBQ8NG41 125 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 C22orf15Q8WYQ4 148 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 SSX3Q99909 188 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 ZNF430Q9H8G1 570 aaPredicted RBP12.92□□□□□ -0.34
TRAF3-204ENST00000539721 FKBP11Q9NYL4 201 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 CACFD1Q9UGQ2 172 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 SIGLEC9Q9Y336 463 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 TEX15Q9BXT5 2789 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 NOTCH2Q04721 2471 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 BAHCC1Q9P281 2608 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 HMSDA8MTL9 139 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 CEBPZOSA8MTT3 80 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 IAPPP10997 89 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 MYOD1P15172 320 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 SPCS3P61009 180 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 SPINK9Q5DT21 86 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 TMEM65Q6PI78 240 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 OR52E5Q8NH55 327 aa12.92□□□□□ -0.34
TRAF3-204ENST00000539721 MDFIC2A0A1B0GVS7 189 aa12.91□□□□□ -0.34
TRAF3-204ENST00000539721 NCBP2LA6PVI3 153 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms