RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 KIAA1644Q3SXP7 199 aa12.33□□□□□ -0.44
CACNB1-206ENST00000539338 GLRX5Q86SX6 157 aa12.33□□□□□ -0.44
CACNB1-206ENST00000539338 BPIFA4PQ86YQ2 179 aa12.33□□□□□ -0.44
CACNB1-206ENST00000539338 LINC00470Q9BZP3 86 aa12.33□□□□□ -0.44
CACNB1-206ENST00000539338 APOBEC3AP31941 199 aaPredicted RBP12.32□□□□□ -0.44
CACNB1-206ENST00000539338 EFNB1P98172 346 aa12.32□□□□□ -0.44
CACNB1-206ENST00000539338 DGAT2L7PQ6IED9 249 aa12.32□□□□□ -0.44
CACNB1-206ENST00000539338 RBPMS2Q6ZRY4 209 aaKnown RBP12.32□□□□□ -0.44
CACNB1-206ENST00000539338 MESP1Q9BRJ9 268 aa12.32□□□□□ -0.44
CACNB1-206ENST00000539338 J3QRE1 110 aa12.32□□□□□ -0.44
CACNB1-206ENST00000539338 MT-ND6P03923 174 aa12.32□□□□□ -0.44
CACNB1-206ENST00000539338 CLDN18P56856 261 aa12.32□□□□□ -0.44
CACNB1-206ENST00000539338 ATRAIDQ6UW56 229 aa12.32□□□□□ -0.44
CACNB1-206ENST00000539338 OR4A5Q8NH83 315 aa12.32□□□□□ -0.44
CACNB1-206ENST00000539338 DNAJC4Q9NNZ3 241 aa12.32□□□□□ -0.44
CACNB1-206ENST00000539338 TNFSF10P50591 281 aa12.32□□□□□ -0.44
CACNB1-206ENST00000539338 ZNF318Q5VUA4 2279 aa12.32□□□□□ -0.44
CACNB1-206ENST00000539338 LOC102724200A0A096LPH7 203 aaPredicted RBP12.32□□□□□ -0.44
CACNB1-206ENST00000539338 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.32□□□□□ -0.44
CACNB1-206ENST00000539338 TMEM189A5PLL7 270 aa12.32□□□□□ -0.44
CACNB1-206ENST00000539338 RELBQ01201 579 aa12.32□□□□□ -0.44
CACNB1-206ENST00000539338 TMEM45BQ96B21 275 aa12.32□□□□□ -0.44
CACNB1-206ENST00000539338 RBM14Q96PK6 669 aaKnown RBP12.32□□□□□ -0.44
CACNB1-206ENST00000539338 CXorf65A6NEN9 183 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 C12orf77C9JDV5 145 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 C8orf88P0DMB2 117 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 ZNF841Q6ZN19 808 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 RCC1LQ96I51 464 aaKnown RBP12.31□□□□□ -0.44
CACNB1-206ENST00000539338 CYB5R2Q6BCY4 276 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 PGLYRP4Q96LB8 373 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 HSPB7Q9UBY9 170 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 CEP250Q9BV73 2442 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 DOCK4Q8N1I0 1966 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 A8MXK9 166 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 GAS1P54826 345 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 FAM209BQ5JX69 171 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 FADS6Q8N9I5 356 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 GRIFINA4D1Z8 144 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 CGB1A6NKQ9 187 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 KBTBD11O94819 623 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 Q6ZT83 130 aa12.31□□□□□ -0.44
CACNB1-206ENST00000539338 SNRNP200O75643 2136 aaKnown RBP12.3□□□□□ -0.44
CACNB1-206ENST00000539338 CDX1P47902 265 aaPredicted RBP12.3□□□□□ -0.44
CACNB1-206ENST00000539338 STPG3Q8N7X2 389 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 MYOZ3Q8TDC0 251 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 GFI1Q99684 422 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 NABP2Q9BQ15 211 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 FCGR2BP31994 310 aaPredicted RBP12.3□□□□□ -0.44
CACNB1-206ENST00000539338 NMUP48645 174 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 SPSB4Q96A44 273 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 GALNT14Q96FL9 552 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 ANK1P16157 1881 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 RRHO14718 337 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 FAM166AQ6J272 317 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 WBP1Q96G27 269 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 GP6Q9HCN6 339 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 OR4C46A6NHA9 309 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 GCGP01275 180 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 LOXL3P58215 753 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 TMEM177Q53S58 311 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 ZNF506Q5JVG8 444 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 HLA-DQA1P01909 254 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 SPATA45Q537H7 98 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 LBHQ53QV2 105 aaPredicted RBP12.3□□□□□ -0.44
CACNB1-206ENST00000539338 FAM201AQ5SY85 155 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 SLC25A33Q9BSK2 321 aa12.3□□□□□ -0.44
CACNB1-206ENST00000539338 MRPL13Q9BYD1 178 aaKnown RBP12.3□□□□□ -0.44
CACNB1-206ENST00000539338 ZSWIM8A7E2V4 1837 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 PSMB2P49721 201 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 PEAR1Q5VY43 1037 aaPredicted RBP12.29□□□□□ -0.44
CACNB1-206ENST00000539338 NPIPB3Q92617 1050 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 IMMP1LQ96LU5 166 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 PSMG3Q9BT73 122 aaPredicted RBP12.29□□□□□ -0.44
CACNB1-206ENST00000539338 OR51M1Q9H341 326 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 AP5S1Q9NUS5 200 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 SRIP30626 198 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 KIR2DL2P43627 348 aaPredicted RBP12.29□□□□□ -0.44
CACNB1-206ENST00000539338 ARF6P62330 175 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 OR4C13Q8NGP0 309 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 SLC25A28Q96A46 364 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 UCP1P25874 307 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 ZFP36L1Q07352 338 aaKnown RBP12.29□□□□□ -0.44
CACNB1-206ENST00000539338 SRSF9Q13242 221 aaKnown RBP eCLIP12.29□□□□□ -0.44
CACNB1-206ENST00000539338 CARHSP1Q9Y2V2 147 aaKnown RBP12.29□□□□□ -0.44
CACNB1-206ENST00000539338 EP300Q09472 2414 aaPredicted RBP12.29□□□□□ -0.44
CACNB1-206ENST00000539338 IGKV1-9A0A0C4DH69 117 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 C17orf98A8MV24 154 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 UMODP07911 640 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 LY6G6FQ5SQ64 297 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 ACP7Q6ZNF0 438 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 SSBP3Q9BWW4 388 aaPredicted RBP12.29□□□□□ -0.44
CACNB1-206ENST00000539338 C1QTNF5Q9BXJ0 243 aa12.29□□□□□ -0.44
CACNB1-206ENST00000539338 PPIAL4CA0A0B4J2A2 164 aa12.28□□□□□ -0.44
CACNB1-206ENST00000539338 ZNF729A6NN14 1252 aaPredicted RBP12.28□□□□□ -0.44
CACNB1-206ENST00000539338 CA2P00918 260 aa12.28□□□□□ -0.44
CACNB1-206ENST00000539338 CECR9P0C854 216 aa12.28□□□□□ -0.44
CACNB1-206ENST00000539338 PPIAL4GP0DN37 164 aa12.28□□□□□ -0.44
CACNB1-206ENST00000539338 ABLIM2Q6H8Q1 611 aa12.28□□□□□ -0.44
CACNB1-206ENST00000539338 MRPL14Q6P1L8 145 aaKnown RBP12.28□□□□□ -0.44
CACNB1-206ENST00000539338 GCHFRP30047 84 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms