RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 ULBP2Q9BZM5 246 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 SAP30LQ9HAJ7 183 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 PLEK2Q9NYT0 353 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 V9GYV3 84 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 ABCA7Q8IZY2 2146 aa5.6□□□□□ -1.51
USP28-207ENST00000538475 CCDC163A0A0D9SF12 145 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 A0A1B0GV72 72 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 IZUMO1RA6ND01 250 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 LRRC30A6NM36 301 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 H3BP45 60 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 OR7C2O60412 319 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 RHBDL1O75783 438 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 CLDN1O95832 211 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 IGKV1-39P01597 117 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 IGKV1D-39P04432 117 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 SCTP09683 121 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 IGLC1P0CG04 106 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 IAPPP10997 89 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 EN2P19622 333 aaPredicted RBP5.59□□□□□ -1.51
USP28-207ENST00000538475 FBLP22087 321 aaKnown RBP5.59□□□□□ -1.51
USP28-207ENST00000538475 CLDN17P56750 224 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 CATR1Q13166 79 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 IGFBP7Q16270 282 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 DEFB110Q30KQ9 67 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 ZNF718Q3SXZ3 478 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 BVES-AS1Q5T3Y7 98 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 LCE5AQ5TCM9 118 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 PLCXD3Q63HM9 321 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 WDR74Q6RFH5 385 aaPredicted RBP5.59□□□□□ -1.51
USP28-207ENST00000538475 Q6ZPA2 131 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 Q6ZRM9 215 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 FAM231DQ6ZW35 169 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 SYT13Q7L8C5 426 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 BHLHA15Q7RTS1 189 aaPredicted RBP5.59□□□□□ -1.51
USP28-207ENST00000538475 TCF23Q7RTU1 214 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 LHFPL4Q7Z7J7 247 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 C12orf76Q8N812 135 aaPredicted RBP5.59□□□□□ -1.51
USP28-207ENST00000538475 ZNF611Q8N823 705 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 OR2M3Q8NG83 312 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 OR52E5Q8NH55 327 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 OR51H1Q8NH63 302 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 ZNF596Q8TC21 504 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 CHCHD1Q96BP2 118 aaKnown RBP5.59□□□□□ -1.51
USP28-207ENST00000538475 SPACA9Q96E40 222 aaPredicted RBP5.59□□□□□ -1.51
USP28-207ENST00000538475 GRAMD2BQ96HH9 432 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 OR2V2Q96R30 315 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 TMEM70Q9BUB7 260 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 RBM24Q9BX46 236 aaKnown RBP5.59□□□□□ -1.51
USP28-207ENST00000538475 CLEC7AQ9BXN2 247 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 TMEM191AQ9H0A3 160 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 ZNF331Q9NQX6 463 aaPredicted RBP5.59□□□□□ -1.51
USP28-207ENST00000538475 PLSCR4Q9NRQ2 329 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 TMEM167BQ9NRX6 74 aa5.59□□□□□ -1.51
USP28-207ENST00000538475 SOX21Q9Y651 276 aaPredicted RBP5.59□□□□□ -1.51
USP28-207ENST00000538475 ZNF407Q9C0G0 2248 aa5.59□□□□□ -1.52
USP28-207ENST00000538475 IGKV1-6A0A0C4DH72 117 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 A0A1B0GUS0 222 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 C17orf51A8MQB3 221 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 TRAPPC2LH3BP13 241 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 SH2D1BO14796 132 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 EFNA2O43921 213 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 HSBP1O75506 76 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 CLDN14O95500 239 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 APCSP02743 223 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 SP9P0CG40 484 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 IGLL1P15814 213 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 CD38P28907 300 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 ATP5IP56385 69 aaPredicted RBP5.58□□□□□ -1.52
USP28-207ENST00000538475 PSG4Q00888 419 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 RAB31Q13636 194 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 TIGITQ495A1 244 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 ZNF585BQ52M93 769 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 PDLIM3Q53GG5 364 aaPredicted RBP5.58□□□□□ -1.52
USP28-207ENST00000538475 PRR31Q5SQ13 230 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 PRSS57Q6UWY2 283 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 COLCA1Q6ZS62 124 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 SFTPA2Q8IWL1 248 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 SFTPA1Q8IWL2 248 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 YAF2Q8IY57 180 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 FGFRL1Q8N441 504 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 FADS6Q8N9I5 356 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 FER1L6-AS1Q8NA97 138 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 TMEM45BQ96B21 275 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 DNAJA3Q96EY1 480 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 NUDT22Q9BRQ3 303 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 C1QTNF5Q9BXJ0 243 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 PKIBQ9C010 78 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 MEGF9Q9H1U4 602 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 RNF186Q9NXI6 227 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 PLA2G3Q9NZ20 509 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 MTCH1Q9NZJ7 389 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 ERRFI1Q9UJM3 462 aaPredicted RBP5.58□□□□□ -1.52
USP28-207ENST00000538475 PSG11Q9UQ72 335 aa5.58□□□□□ -1.52
USP28-207ENST00000538475 TANC2Q9HCD6 1990 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 TRBV20OR9-2A0A075B6H5 130 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 IGLV3-12A0A075B6K2 115 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 SPTY2D1-AS1A0A0U1RR47 76 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 TMEM189A5PLL7 270 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 A6NDN8 102 aa5.57□□□□□ -1.52
USP28-207ENST00000538475 C2orf70A6NJV1 201 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms