RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 NPY1RP25929 384 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 IL3RAP26951 378 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 CHRNB4P30926 498 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 APOBEC3AP31941 199 aaPredicted RBP5.46□□□□□ -1.54
USP28-206ENST00000538224 OPRK1P41145 380 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 VDAC2P45880 294 aaPredicted RBP5.46□□□□□ -1.54
USP28-206ENST00000538224 CDC34P49427 236 aaPredicted RBP5.46□□□□□ -1.54
USP28-206ENST00000538224 HSPE1P61604 102 aaKnown RBP5.46□□□□□ -1.54
USP28-206ENST00000538224 RPL31P62899 125 aaKnown RBP5.46□□□□□ -1.54
USP28-206ENST00000538224 CCL8P80075 99 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 MEF2BQ02080 365 aaPredicted RBP5.46□□□□□ -1.54
USP28-206ENST00000538224 KLRB1Q12918 225 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 ZNF726P1Q15940 193 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 OR4A47Q6IF82 309 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 ADAM5Q6NVV9 412 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 ETV3LQ6ZN32 361 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 ZNF833PQ6ZTB9 187 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 SSX9Q7RTT3 188 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 TCF23Q7RTU1 214 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 ZGRF1Q86YA3 2104 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 MRPL41Q8IXM3 137 aaKnown RBP5.46□□□□□ -1.54
USP28-206ENST00000538224 LINC00311Q8N616 119 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 FAM216BQ8N7L0 139 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 SLC24A4Q8NFF2 622 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 OR4A5Q8NH83 315 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 VSTM2AQ8TAG5 236 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 OSR1Q8TAX0 266 aaPredicted RBP5.46□□□□□ -1.54
USP28-206ENST00000538224 RNASE6Q93091 150 aaKnown RBP5.46□□□□□ -1.54
USP28-206ENST00000538224 RHOVQ96L33 236 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 CTDSP1Q9GZU7 261 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 SLC35D1Q9NTN3 355 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 TMEM106BQ9NUM4 274 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 TMEM242Q9NWH2 141 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 BET1LQ9NYM9 111 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 SH3BGRL2Q9UJC5 107 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 RFNGQ9Y644 331 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 PLCE1Q9P212 2302 aa5.46□□□□□ -1.54
USP28-206ENST00000538224 RIF1Q5UIP0 2472 aaKnown RBP5.46□□□□□ -1.54
USP28-206ENST00000538224 TET2Q6N021 2002 aaPredicted RBP5.45□□□□□ -1.54
USP28-206ENST00000538224 MEX3AA1L020 520 aaKnown RBP5.45□□□□□ -1.54
USP28-206ENST00000538224 SHISA9B4DS77 424 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 GFRA3O60609 400 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 PROP1O75360 226 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 MT-CO2P00403 227 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 CRYBA1P05813 215 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 RAB5AP20339 215 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 CA7P43166 264 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 GNG10P50151 68 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 ZNF134P52741 427 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 CEBPGP53567 150 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 PRCDQ00LT1 54 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 FAM201AQ5SY85 155 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 FAM90A2PQ658T7 463 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 FAM53AQ6NSI3 398 aaPredicted RBP5.45□□□□□ -1.54
USP28-206ENST00000538224 ACSM6Q6P461 480 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 CYP2G1PQ6ZSU1 146 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 PDPNQ86YL7 162 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 C1QL4Q86Z23 238 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 RPP25LQ8N5L8 163 aaKnown RBP5.45□□□□□ -1.54
USP28-206ENST00000538224 ST6GALNAC3Q8NDV1 305 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 OR13D1Q8NGV5 346 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 OR5B3Q8NH48 314 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 NANPQ8TBE9 248 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 ZNF596Q8TC21 504 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 CA5BP1Q8WTZ4 195 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 TNFRSF14Q92956 283 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 TMEM186Q96B77 213 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 PLPPR2Q96GM1 343 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 PCGF1Q9BSM1 259 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 C20orf24Q9BUV8 137 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 VSIRQ9H7M9 311 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 PLEKHA3Q9HB20 300 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 NPVFQ9HCQ7 196 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 NAT8Q9UHE5 227 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 DIDO1Q9BTC0 2240 aaKnown RBP5.45□□□□□ -1.54
USP28-206ENST00000538224 CACNA1DQ01668 2161 aa5.45□□□□□ -1.54
USP28-206ENST00000538224 LOC400499M0QZD8 3231 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 A0A087X0M5 115 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 IGHV1-69-2A0A0G2JMI3 117 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 A0A1B0GX30 115 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 A0A1W2PN81 502 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 A0A1W2PPV4 95 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 ZNF727A8MUV8 499 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 PRSS46E5RG02 174 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 F6UZH7 168 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 INS-IGF2F8WCM5 200 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 UPK2O00526 184 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 PDE6DO43924 150 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 KBTBD11O94819 623 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 RBP4P02753 201 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 FAM87AP0C7U9 286 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 AGAP20933 346 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 USF1P22415 310 aaPredicted RBP5.44□□□□□ -1.54
USP28-206ENST00000538224 CHRNA7P36544 502 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 PPOXP50336 477 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 ZNF137PP52743 207 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 FGF8P55075 233 aaPredicted RBP5.44□□□□□ -1.54
USP28-206ENST00000538224 BPIFB3P59826 476 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 TFF3Q07654 80 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 HNF4GQ14541 408 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms