RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 RRHO14718 337 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 LHX2P50458 406 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 ARL17AQ8IVW1 177 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 ELOA3CA0A087WX78 387 aaPredicted RBP9.49□□□□□ -0.89
LINC00346-201ENST00000538077 SIAH2O43255 324 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 CEACAM4O75871 244 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 C1QL2Q7Z5L3 287 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 CHAC2Q8WUX2 184 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 MRPL20Q9BYC9 149 aaKnown RBP9.49□□□□□ -0.89
LINC00346-201ENST00000538077 MAP1LC3AQ9H492 121 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 M0R381 172 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 HLA-DQB1P01920 261 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 VAX1Q5SQQ9 334 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 LHFPL4Q7Z7J7 247 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 TP53RKQ96S44 253 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 BEX4Q9NWD9 120 aaPredicted RBP9.49□□□□□ -0.89
LINC00346-201ENST00000538077 TSPOP30536 169 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 PTGDSP41222 190 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 C1QTNF12Q5T7M4 302 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 H1FOOQ8IZA3 346 aaPredicted RBP9.49□□□□□ -0.89
LINC00346-201ENST00000538077 MRAP2Q96G30 205 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 TCF19Q9Y242 345 aa9.49□□□□□ -0.89
LINC00346-201ENST00000538077 KIAA1644Q3SXP7 199 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 PET117Q6UWS5 81 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 OR13A1Q8NGR1 328 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 ARPC1AQ92747 370 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 MRPS18AQ9NVS2 196 aaKnown RBP9.48□□□□□ -0.89
LINC00346-201ENST00000538077 SCN2AQ99250 2005 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 A8MWL6 223 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 NPIPB8E9PQR5 432 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 GNLYP22749 145 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 TNFSF10P50591 281 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 ZNF146Q15072 292 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 DPH3P1Q9H4G8 78 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 ZNF646O15015 1829 aaPredicted RBP9.48□□□□□ -0.89
LINC00346-201ENST00000538077 PINLYPA6NC86 204 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 ZNF250P15622 560 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 EGR1P18146 543 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 ICAM4Q14773 271 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 GALNT14Q96FL9 552 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 ATG101Q9BSB4 218 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 C5orf66Q9H5L9 145 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 SPRR3Q9UBC9 169 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 A0A087X0M5 115 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 A0A1B0GX30 115 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 PRSS2P07478 247 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 SEC11BP0C7V7 166 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 NEU4Q8WWR8 484 aaPredicted RBP9.48□□□□□ -0.89
LINC00346-201ENST00000538077 MESP1Q9BRJ9 268 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 MRPL18Q9H0U6 180 aaKnown RBP9.48□□□□□ -0.89
LINC00346-201ENST00000538077 MTCL1Q9Y4B5 1905 aaKnown RBP9.48□□□□□ -0.89
LINC00346-201ENST00000538077 ZNF708P17019 499 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 LINC00527Q9UJ94 153 aa9.48□□□□□ -0.89
LINC00346-201ENST00000538077 A6NDN8 102 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 HOXB1P14653 301 aaPredicted RBP9.47□□□□□ -0.89
LINC00346-201ENST00000538077 CCL3L1P16619 93 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 SUMO2P61956 95 aaKnown RBP9.47□□□□□ -0.89
LINC00346-201ENST00000538077 SPATA45Q537H7 98 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 HSPB9Q9BQS6 159 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 FOXD3Q9UJU5 478 aaPredicted RBP9.47□□□□□ -0.89
LINC00346-201ENST00000538077 GPR132Q9UNW8 380 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 GCGP01275 180 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 RPLP1P05386 114 aaKnown RBP9.47□□□□□ -0.89
LINC00346-201ENST00000538077 SCGB1A1P11684 91 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 TFF3Q07654 80 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 CYP2G1PQ6ZSU1 146 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 ATOH7Q8N100 152 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 VWCEQ96DN2 955 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 HIST1H4GQ99525 98 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 NABP2Q9BQ15 211 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 GPR61Q9BZJ8 451 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 TCRBV4S1A1TA0A5B7 111 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 PIN1P1O15428 100 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 TBR1Q16650 682 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 SLC25A38Q96DW6 304 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 TRBV5-7A0A0A0MS05 114 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 RBFOX2O43251 390 aaKnown RBP eCLIP9.47□□□□□ -0.89
LINC00346-201ENST00000538077 C8orf88P0DMB2 117 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 SAXO1Q8IYX7 474 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 CTHRC1Q96CG8 243 aa9.47□□□□□ -0.89
LINC00346-201ENST00000538077 GEMIN7Q9H840 131 aaKnown RBP9.47□□□□□ -0.89
LINC00346-201ENST00000538077 EFEMP2O95967 443 aa9.46□□□□□ -0.89
LINC00346-201ENST00000538077 TMEM187Q14656 261 aa9.46□□□□□ -0.89
LINC00346-201ENST00000538077 DNM1P46Q6ZS02 220 aa9.46□□□□□ -0.89
LINC00346-201ENST00000538077 M0QZK8 103 aa9.46□□□□□ -0.89
LINC00346-201ENST00000538077 GGCTO75223 188 aaKnown RBP9.46□□□□□ -0.89
LINC00346-201ENST00000538077 GLRXP35754 106 aa9.46□□□□□ -0.89
LINC00346-201ENST00000538077 ZXDCQ2QGD7 858 aaPredicted RBP9.46□□□□□ -0.89
LINC00346-201ENST00000538077 TMEM45BQ96B21 275 aa9.46□□□□□ -0.89
LINC00346-201ENST00000538077 TMEM101Q96IK0 257 aa9.46□□□□□ -0.89
LINC00346-201ENST00000538077 TRBV20OR9-2A0A075B6H5 130 aa9.46□□□□□ -0.9
LINC00346-201ENST00000538077 COX5BP10606 129 aa9.46□□□□□ -0.9
LINC00346-201ENST00000538077 SELENOTP62341 195 aa9.46□□□□□ -0.9
LINC00346-201ENST00000538077 OR4A47Q6IF82 309 aa9.46□□□□□ -0.9
LINC00346-201ENST00000538077 STHQ8IWL8 128 aa9.46□□□□□ -0.9
LINC00346-201ENST00000538077 C1orf162Q8NEQ5 155 aaPredicted RBP9.46□□□□□ -0.9
LINC00346-201ENST00000538077 SPAG17Q6Q759 2223 aa9.46□□□□□ -0.9
LINC00346-201ENST00000538077 IGFBP2P18065 325 aa9.46□□□□□ -0.9
LINC00346-201ENST00000538077 HINT1P49773 126 aaPredicted RBP9.46□□□□□ -0.9
LINC00346-201ENST00000538077 SRSF6Q13247 344 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms