RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 TMED3Q9Y3Q3 217 aa12.51□□□□□ -0.41
SFSWAP-206ENST00000537582 MMP24Q9Y5R2 645 aa12.51□□□□□ -0.41
SFSWAP-206ENST00000537582 HRASP01112 189 aa12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 IFNA21P01568 189 aa12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 ARHGDIBP52566 201 aa12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 ERVK-16P61578 105 aa12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 PJVKQ0ZLH3 352 aa12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 EBI3Q14213 229 aa12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 MMDQ15546 238 aa12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 POU2AF1Q16633 256 aa12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 MRGPRG-AS1Q2M3A8 158 aa12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 C11orf87Q6NUJ2 197 aa12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 GSG1LQ6UXU4 331 aa12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 H2BFWTQ7Z2G1 175 aa12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 LSM10Q969L4 123 aaKnown RBP12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 ZNF436Q9C0F3 470 aaPredicted RBP12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 FBXL15Q9H469 300 aa12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 GSKIPQ9P0R6 139 aa12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 HSPB11Q9Y547 144 aa12.5□□□□□ -0.41
SFSWAP-206ENST00000537582 DUXBA0A1W2PPF3 345 aa12.49□□□□□ -0.41
SFSWAP-206ENST00000537582 INAFM1C9JVW0 142 aa12.49□□□□□ -0.41
SFSWAP-206ENST00000537582 FAM106CPP0CH98 169 aa12.49□□□□□ -0.41
SFSWAP-206ENST00000537582 DYNLT3P51808 116 aa12.49□□□□□ -0.41
SFSWAP-206ENST00000537582 PUSL1Q8N0Z8 303 aaKnown RBP12.49□□□□□ -0.41
SFSWAP-206ENST00000537582 SIGLECL1Q8N7X8 197 aa12.49□□□□□ -0.41
SFSWAP-206ENST00000537582 SH2D7A6NKC9 451 aaPredicted RBP12.48□□□□□ -0.41
SFSWAP-206ENST00000537582 CRYGBP07316 175 aa12.48□□□□□ -0.41
SFSWAP-206ENST00000537582 IL6RP08887 468 aaPredicted RBP12.48□□□□□ -0.41
SFSWAP-206ENST00000537582 UBE2KP61086 200 aa12.48□□□□□ -0.41
SFSWAP-206ENST00000537582 RELBQ01201 579 aa12.48□□□□□ -0.41
SFSWAP-206ENST00000537582 CXorf66Q5JRM2 361 aaPredicted RBP12.48□□□□□ -0.41
SFSWAP-206ENST00000537582 THNSL2Q86YJ6 484 aa12.48□□□□□ -0.41
SFSWAP-206ENST00000537582 ZDHHC16Q969W1 377 aa12.48□□□□□ -0.41
SFSWAP-206ENST00000537582 CLCC1Q96S66 551 aa12.48□□□□□ -0.41
SFSWAP-206ENST00000537582 PDCD10Q9BUL8 212 aa12.48□□□□□ -0.41
SFSWAP-206ENST00000537582 QTRT1Q9BXR0 403 aaKnown RBP12.48□□□□□ -0.41
SFSWAP-206ENST00000537582 TMEM160Q9NX00 188 aa12.48□□□□□ -0.41
SFSWAP-206ENST00000537582 METTL1Q9UBP6 276 aaKnown RBP12.48□□□□□ -0.41
SFSWAP-206ENST00000537582 NCBP2LA6PVI3 153 aaKnown RBP12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 UPK2O00526 184 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 FCN1O00602 326 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 NBR2O15453 112 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 KBTBD11O94819 623 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 OR2A4O95047 310 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 HNF1AP20823 631 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 IER3P46695 156 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 LGALS7P47929 136 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 SMCO1Q147U7 214 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 SPINK9Q5DT21 86 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 Q6YL49 198 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 C2orf50Q96LR7 162 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 DUX5Q96PT3 197 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 OR2A7Q96R45 310 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 TSNAXQ99598 290 aaKnown RBP12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 TCF19Q9Y242 345 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 SIGLEC9Q9Y336 463 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 F8P00451 2351 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 MTORP42345 2549 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 A6NDX4 124 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 RRHO14718 337 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 HOXA3O43365 443 aaPredicted RBP12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 CHST1O43916 411 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 PITX3O75364 302 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 ATG12O94817 140 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 NDUFA3O95167 84 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 SCGB1D2O95969 90 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 OPN1MWP04001 364 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 GIPP09681 153 aaPredicted RBP12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 OPN1MW2P0DN77 364 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 OPN1MW3P0DN78 364 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 IL15RAQ13261 267 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 TUSC1Q2TAM9 212 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 VMA21Q3ZAQ7 101 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 LRRC37A5PQ49AS3 106 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 C10orf55Q5SWW7 151 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 TEX29Q8N6K0 151 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 NPBQ8NG41 125 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 OR4D5Q8NGN0 318 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 ZNF430Q9H8G1 570 aaPredicted RBP12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 BET1LQ9NYM9 111 aa12.47□□□□□ -0.41
SFSWAP-206ENST00000537582 NAV3Q8IVL0 2385 aa12.46□□□□□ -0.41
SFSWAP-206ENST00000537582 HIVEP2P31629 2446 aa12.46□□□□□ -0.41
SFSWAP-206ENST00000537582 A0A1B0GU03 582 aa12.46□□□□□ -0.42
SFSWAP-206ENST00000537582 G3V3Q6 166 aa12.46□□□□□ -0.42
SFSWAP-206ENST00000537582 SNAPC5O75971 98 aa12.46□□□□□ -0.42
SFSWAP-206ENST00000537582 SSBP2P81877 361 aaPredicted RBP12.46□□□□□ -0.42
SFSWAP-206ENST00000537582 THOC7Q6I9Y2 204 aaKnown RBP12.46□□□□□ -0.42
SFSWAP-206ENST00000537582 Q8N9W7 124 aa12.46□□□□□ -0.42
SFSWAP-206ENST00000537582 OR11H4Q8NGC9 324 aa12.46□□□□□ -0.42
SFSWAP-206ENST00000537582 OR1S1Q8NH92 325 aa12.46□□□□□ -0.42
SFSWAP-206ENST00000537582 TMEM167AQ8TBQ9 72 aa12.46□□□□□ -0.42
SFSWAP-206ENST00000537582 RNF5Q99942 180 aa12.46□□□□□ -0.42
SFSWAP-206ENST00000537582 SLC25A33Q9BSK2 321 aa12.46□□□□□ -0.42
SFSWAP-206ENST00000537582 MAGT1Q9H0U3 335 aa12.46□□□□□ -0.42
SFSWAP-206ENST00000537582 PRDM13Q9H4Q3 707 aa12.46□□□□□ -0.42
SFSWAP-206ENST00000537582 ST8SIA3O43173 380 aa12.45□□□□□ -0.42
SFSWAP-206ENST00000537582 RBMXL2O75526 392 aaKnown RBP12.45□□□□□ -0.42
SFSWAP-206ENST00000537582 MBPP02686 304 aaPredicted RBP12.45□□□□□ -0.42
SFSWAP-206ENST00000537582 SRSF4Q08170 494 aaKnown RBP12.45□□□□□ -0.42
SFSWAP-206ENST00000537582 RAB32Q13637 225 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms