RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 TMEM170AQ8WVE7 144 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 LEAP2Q969E1 77 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 DERL1Q9BUN8 251 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 GGTLC1Q9BX51 225 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 ASCL3Q9NQ33 180 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 KCNIP2Q9NS61 270 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 CALYQ9NYX4 217 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 INTS1Q8N201 2190 aaKnown RBP11.83□□□□□ -0.52
USP44-203ENST00000537435 M0R1B8 84 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 NDUFB4O95168 129 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 SELLP14151 372 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 FAM169BQ8N8A8 192 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 DEFB124Q8NES8 71 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 FUT9Q9Y231 359 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 TCF19Q9Y242 345 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 PXMP4Q9Y6I8 212 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 SPAARA0A1B0GVQ0 90 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 SPRY3O43610 288 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 GATCO43716 136 aaKnown RBP11.82□□□□□ -0.52
USP44-203ENST00000537435 AMBPP02760 352 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 ARL14EPLP0DKL9 152 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 DEFB109BQ30KR1 87 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 FAM201AQ5SY85 155 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 KCNIP4Q6PIL6 250 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 VHLLQ6RSH7 139 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 DDB2Q92466 427 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 HEATR1Q9H583 2144 aaKnown RBP11.82□□□□□ -0.52
USP44-203ENST00000537435 TMPRSS2O15393 492 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 FTH1P19P0C7X4 201 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 KIR2DS2P43631 304 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 TMPRSS3P57727 454 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 DEFA6Q01524 100 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 COA6Q5JTJ3 125 aaKnown RBP11.82□□□□□ -0.52
USP44-203ENST00000537435 ACTL10Q5JWF8 245 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 FAM78BQ5VT40 261 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 TMEM37Q8WXS4 190 aa11.82□□□□□ -0.52
USP44-203ENST00000537435 F6UZH7 168 aa11.81□□□□□ -0.52
USP44-203ENST00000537435 TYMSP04818 313 aa11.81□□□□□ -0.52
USP44-203ENST00000537435 STAG3L2P0CL84 134 aa11.81□□□□□ -0.52
USP44-203ENST00000537435 STAG3L3P0CL85 134 aa11.81□□□□□ -0.52
USP44-203ENST00000537435 C17orf58Q2M2W7 97 aa11.81□□□□□ -0.52
USP44-203ENST00000537435 PIP4P1Q86T03 277 aa11.81□□□□□ -0.52
USP44-203ENST00000537435 CISD2Q8N5K1 135 aaKnown RBP11.81□□□□□ -0.52
USP44-203ENST00000537435 OR4S2Q8NH73 311 aa11.81□□□□□ -0.52
USP44-203ENST00000537435 ITLN1Q8WWA0 313 aa11.81□□□□□ -0.52
USP44-203ENST00000537435 HCFC1P51610 2035 aa11.81□□□□□ -0.52
USP44-203ENST00000537435 MBD3L4A6NDZ8 208 aaPredicted RBP11.81□□□□□ -0.52
USP44-203ENST00000537435 MBD3L3A6NE82 208 aaPredicted RBP11.81□□□□□ -0.52
USP44-203ENST00000537435 PGPEP1LA6NFU8 196 aa11.81□□□□□ -0.52
USP44-203ENST00000537435 MBD3L5A6NJ08 208 aaPredicted RBP11.81□□□□□ -0.52
USP44-203ENST00000537435 C1QTNF9P0C862 333 aa11.81□□□□□ -0.52
USP44-203ENST00000537435 NUBP1P53384 320 aa11.81□□□□□ -0.52
USP44-203ENST00000537435 ZNF114Q8NC26 417 aa11.81□□□□□ -0.52
USP44-203ENST00000537435 MBD3L2Q8NHZ7 208 aaPredicted RBP11.81□□□□□ -0.52
USP44-203ENST00000537435 SSMEM1Q8WWF3 244 aa11.81□□□□□ -0.52
USP44-203ENST00000537435 ACY3Q96HD9 319 aa11.81□□□□□ -0.52
USP44-203ENST00000537435 TMEM204Q9BSN7 226 aa11.81□□□□□ -0.52
USP44-203ENST00000537435 SPENQ96T58 3664 aaKnown RBP11.8□□□□□ -0.52
USP44-203ENST00000537435 TRGV8A0A0C4DH27 118 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 C15orf61A6NNL5 157 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 DVL1O14640 695 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 LHBP01229 141 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 CGB3P0DN86 165 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 CGB7P0DN87 165 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 GPX4P36969 197 aaPredicted RBP11.8□□□□□ -0.52
USP44-203ENST00000537435 RAB7AP51149 207 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 KLF3P57682 345 aaPredicted RBP11.8□□□□□ -0.52
USP44-203ENST00000537435 CT45A1Q5HYN5 189 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 CT45A3Q8NHU0 189 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 C1orf159Q96HA4 380 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 RHOVQ96L33 236 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 SAA2-SAA4A0A096LPE2 208 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 CXorf1O96002 111 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 SAA2P0DJI9 122 aaPredicted RBP11.8□□□□□ -0.52
USP44-203ENST00000537435 CD99P14209 185 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 JOSD1Q15040 202 aaPredicted RBP11.8□□□□□ -0.52
USP44-203ENST00000537435 PRSS8Q16651 343 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 ZNF474Q6S9Z5 364 aaPredicted RBP11.8□□□□□ -0.52
USP44-203ENST00000537435 OR5R1Q8NH85 324 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 RNASEH2CQ8TDP1 164 aaKnown RBP11.8□□□□□ -0.52
USP44-203ENST00000537435 PRO1933Q9H354 126 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 NPVFQ9HCQ7 196 aa11.8□□□□□ -0.52
USP44-203ENST00000537435 LSM4Q9Y4Z0 139 aaKnown RBP11.8□□□□□ -0.52
USP44-203ENST00000537435 IL3RAP26951 378 aa11.79□□□□□ -0.52
USP44-203ENST00000537435 GLRXP35754 106 aa11.79□□□□□ -0.52
USP44-203ENST00000537435 PDLIM4P50479 330 aa11.79□□□□□ -0.52
USP44-203ENST00000537435 PKIAP61925 76 aa11.79□□□□□ -0.52
USP44-203ENST00000537435 LCN2P80188 198 aa11.79□□□□□ -0.52
USP44-203ENST00000537435 ARSJQ5FYB0 599 aaPredicted RBP11.79□□□□□ -0.52
USP44-203ENST00000537435 DUX4L9Q6RFH8 374 aaPredicted RBP11.79□□□□□ -0.52
USP44-203ENST00000537435 DSPP15924 2871 aaKnown RBP11.79□□□□□ -0.52
USP44-203ENST00000537435 SCO2A0A1W2PP80 73 aa11.79□□□□□ -0.52
USP44-203ENST00000537435 IL6RP08887 468 aaPredicted RBP11.79□□□□□ -0.52
USP44-203ENST00000537435 NPY1RP25929 384 aa11.79□□□□□ -0.52
USP44-203ENST00000537435 TIMM23BQ5SRD1 257 aa11.79□□□□□ -0.52
USP44-203ENST00000537435 OR4A47Q6IF82 309 aa11.79□□□□□ -0.52
USP44-203ENST00000537435 SLC24A4Q8NFF2 622 aa11.79□□□□□ -0.52
USP44-203ENST00000537435 TXNDC17Q9BRA2 123 aa11.79□□□□□ -0.52
USP44-203ENST00000537435 SVILO95425 2214 aa11.78□□□□□ -0.52
USP44-203ENST00000537435 CADP27708 2225 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms