RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 FGF2P09038 288 aa13.24□□□□□ -0.29
SFSWAP-205ENST00000537164 HRH1P35367 487 aa13.24□□□□□ -0.29
SFSWAP-205ENST00000537164 SLURP1P55000 103 aa13.24□□□□□ -0.29
SFSWAP-205ENST00000537164 TAS2R31P59538 309 aa13.24□□□□□ -0.29
SFSWAP-205ENST00000537164 ZNF429Q86V71 674 aa13.24□□□□□ -0.29
SFSWAP-205ENST00000537164 TMEM17Q86X19 198 aa13.24□□□□□ -0.29
SFSWAP-205ENST00000537164 TTC9CQ8N5M4 171 aa13.24□□□□□ -0.29
SFSWAP-205ENST00000537164 CD300LFQ8TDQ1 290 aa13.24□□□□□ -0.29
SFSWAP-205ENST00000537164 RANGRFQ9HD47 186 aaPredicted RBP13.24□□□□□ -0.29
SFSWAP-205ENST00000537164 SORL1Q92673 2214 aa13.24□□□□□ -0.29
SFSWAP-205ENST00000537164 C13orf42A0A1B0GVH6 325 aa13.23□□□□□ -0.29
SFSWAP-205ENST00000537164 TEX22C9J3V5 150 aa13.23□□□□□ -0.29
SFSWAP-205ENST00000537164 RCVRNP35243 200 aa13.23□□□□□ -0.29
SFSWAP-205ENST00000537164 C10orf55Q5SWW7 151 aa13.23□□□□□ -0.29
SFSWAP-205ENST00000537164 ZNF343Q6P1L6 599 aa13.23□□□□□ -0.29
SFSWAP-205ENST00000537164 ACSM6Q6P461 480 aa13.23□□□□□ -0.29
SFSWAP-205ENST00000537164 SNX29P2Q8IUI4 249 aa13.23□□□□□ -0.29
SFSWAP-205ENST00000537164 OR6F1Q8NGZ6 308 aa13.23□□□□□ -0.29
SFSWAP-205ENST00000537164 OR4A5Q8NH83 315 aa13.23□□□□□ -0.29
SFSWAP-205ENST00000537164 BCL7BQ9BQE9 202 aa13.23□□□□□ -0.29
SFSWAP-205ENST00000537164 PLEKHA2Q9HB19 425 aa13.23□□□□□ -0.29
SFSWAP-205ENST00000537164 COA4Q9NYJ1 87 aa13.23□□□□□ -0.29
SFSWAP-205ENST00000537164 RBMXL2O75526 392 aaKnown RBP13.22□□□□□ -0.29
SFSWAP-205ENST00000537164 ZNF735P0CB33 412 aa13.22□□□□□ -0.29
SFSWAP-205ENST00000537164 APELAP0DMC3 54 aa13.22□□□□□ -0.29
SFSWAP-205ENST00000537164 NQO2P16083 231 aa13.22□□□□□ -0.29
SFSWAP-205ENST00000537164 HLA-DMAP28067 261 aa13.22□□□□□ -0.29
SFSWAP-205ENST00000537164 DCTN2Q13561 401 aaKnown RBP13.22□□□□□ -0.29
SFSWAP-205ENST00000537164 KLK9Q2XQG4 91 aa13.22□□□□□ -0.29
SFSWAP-205ENST00000537164 OR4A47Q6IF82 309 aa13.22□□□□□ -0.29
SFSWAP-205ENST00000537164 CADM3Q8N126 398 aa13.22□□□□□ -0.29
SFSWAP-205ENST00000537164 FXYD6Q9H0Q3 95 aa13.22□□□□□ -0.29
SFSWAP-205ENST00000537164 KLK9Q9UKQ9 250 aa13.22□□□□□ -0.29
SFSWAP-205ENST00000537164 A0A1B0GW64 132 aa13.21□□□□□ -0.29
SFSWAP-205ENST00000537164 FAM223BA6NKX1 122 aa13.21□□□□□ -0.29
SFSWAP-205ENST00000537164 NPIPB5A8MRT5 1133 aa13.21□□□□□ -0.29
SFSWAP-205ENST00000537164 E7EUB6 86 aa13.21□□□□□ -0.29
SFSWAP-205ENST00000537164 PGLYRP1O75594 196 aaPredicted RBP13.21□□□□□ -0.29
SFSWAP-205ENST00000537164 ZP3P21754 424 aa13.21□□□□□ -0.29
SFSWAP-205ENST00000537164 RPL27AP46776 148 aaKnown RBP13.21□□□□□ -0.29
SFSWAP-205ENST00000537164 RPL8P62917 257 aaKnown RBP13.21□□□□□ -0.29
SFSWAP-205ENST00000537164 ZNF45Q02386 682 aa13.21□□□□□ -0.29
SFSWAP-205ENST00000537164 VAX1Q5SQQ9 334 aa13.21□□□□□ -0.29
SFSWAP-205ENST00000537164 SLC25A42Q86VD7 318 aa13.21□□□□□ -0.29
SFSWAP-205ENST00000537164 FAM223AQ8IWN6 122 aa13.21□□□□□ -0.29
SFSWAP-205ENST00000537164 RAB2BQ8WUD1 216 aa13.21□□□□□ -0.29
SFSWAP-205ENST00000537164 SLC2A9Q9NRM0 540 aa13.21□□□□□ -0.29
SFSWAP-205ENST00000537164 COMMD9Q9P000 198 aa13.21□□□□□ -0.29
SFSWAP-205ENST00000537164 ZNF257Q9Y2Q1 563 aa13.21□□□□□ -0.29
SFSWAP-205ENST00000537164 FAM25AB3EWG3 89 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 FAM25CB3EWG5 89 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 FAM25GB3EWG6 89 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 MPPED1O15442 326 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 CRYGCP07315 174 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 F2RP25116 425 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 TMBIM6P55061 237 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 UCP3P55916 312 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 KLF5Q13887 457 aaPredicted RBP13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 SPCS2Q15005 226 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 AADACL3Q5VUY0 350 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 LPCAT3Q6P1A2 487 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 SSX9Q7RTT3 188 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 CMTM1Q8IZ96 169 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 OR51H1Q8NH63 302 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 C15orf40Q8WUR7 153 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 MIXL1Q9H2W2 232 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 AKIP1Q9NQ31 210 aa13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 FAM212BQ9NTI7 297 aaPredicted RBP13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 PEF1Q9UBV8 284 aaKnown RBP13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 LSM4Q9Y4Z0 139 aaKnown RBP13.2□□□□□ -0.3
SFSWAP-205ENST00000537164 DNAH9Q9NYC9 4486 aa13.19□□□□□ -0.3
SFSWAP-205ENST00000537164 CGB1A6NKQ9 187 aa13.19□□□□□ -0.3
SFSWAP-205ENST00000537164 GPR31O00270 319 aa13.19□□□□□ -0.3
SFSWAP-205ENST00000537164 RLN1P04808 185 aa13.19□□□□□ -0.3
SFSWAP-205ENST00000537164 HLA-GP17693 338 aa13.19□□□□□ -0.3
SFSWAP-205ENST00000537164 RHOGP84095 191 aa13.19□□□□□ -0.3
SFSWAP-205ENST00000537164 DEFB121Q5J5C9 76 aa13.19□□□□□ -0.3
SFSWAP-205ENST00000537164 CLVS1Q8IUQ0 354 aaPredicted RBP13.19□□□□□ -0.3
SFSWAP-205ENST00000537164 NECAP1Q8NC96 275 aa13.19□□□□□ -0.3
SFSWAP-205ENST00000537164 ABHD1Q96SE0 405 aa13.19□□□□□ -0.3
SFSWAP-205ENST00000537164 RSRP1Q9BUV0 290 aa13.19□□□□□ -0.3
SFSWAP-205ENST00000537164 EXTL2Q9UBQ6 330 aa13.19□□□□□ -0.3
SFSWAP-205ENST00000537164 KLK11Q9UBX7 282 aa13.19□□□□□ -0.3
SFSWAP-205ENST00000537164 MTFP1Q9UDX5 166 aa13.19□□□□□ -0.3
SFSWAP-205ENST00000537164 ZNF256Q9Y2P7 627 aaPredicted RBP13.19□□□□□ -0.3
SFSWAP-205ENST00000537164 HMX3A6NHT5 357 aa13.18□□□□□ -0.3
SFSWAP-205ENST00000537164 UPK2O00526 184 aa13.18□□□□□ -0.3
SFSWAP-205ENST00000537164 SAP30O75446 220 aa13.18□□□□□ -0.3
SFSWAP-205ENST00000537164 S1PR2O95136 353 aa13.18□□□□□ -0.3
SFSWAP-205ENST00000537164 TBPP20226 339 aa13.18□□□□□ -0.3
SFSWAP-205ENST00000537164 ECI1P42126 302 aa13.18□□□□□ -0.3
SFSWAP-205ENST00000537164 RPL5P46777 297 aaKnown RBP13.18□□□□□ -0.3
SFSWAP-205ENST00000537164 TSPAN5P62079 268 aa13.18□□□□□ -0.3
SFSWAP-205ENST00000537164 ZNF585BQ52M93 769 aa13.18□□□□□ -0.3
SFSWAP-205ENST00000537164 DYNC2LI1Q8TCX1 351 aa13.18□□□□□ -0.3
SFSWAP-205ENST00000537164 DGCR14Q96DF8 476 aaKnown RBP13.18□□□□□ -0.3
SFSWAP-205ENST00000537164 B9D2Q9BPU9 175 aa13.18□□□□□ -0.3
SFSWAP-205ENST00000537164 ANKRD34BA5PLL1 514 aa13.17□□□□□ -0.3
SFSWAP-205ENST00000537164 MARCH11A6NNE9 402 aa13.17□□□□□ -0.3
SFSWAP-205ENST00000537164 PRH1P02810 166 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms