RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 TMEM38BQ9NVV0 291 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 IL36BQ9NZH7 164 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 R4GN57 208 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 PGPEP1LA6NFU8 196 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 CA1P00915 261 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-213ENST00000537002 NAA38Q9BRA0 125 aaKnown RBP4.6□□□□□ -1.67
PTPRD-213ENST00000537002 AICDAQ9GZX7 198 aa4.6□□□□□ -1.67
PTPRD-213ENST00000537002 CCL25O15444 150 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 CLEC3BP05452 202 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 CEBPDP49716 269 aaPredicted RBP4.59□□□□□ -1.67
PTPRD-213ENST00000537002 LYZP61626 148 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 RNPS1Q15287 305 aaKnown RBP4.59□□□□□ -1.67
PTPRD-213ENST00000537002 BHLHA15Q7RTS1 189 aaPredicted RBP4.59□□□□□ -1.67
PTPRD-213ENST00000537002 C1orf210Q8IVY1 113 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 LYG1Q8N1E2 194 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 OR4S2Q8NH73 311 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 SCO2A0A1W2PP80 73 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 M0QZ24 198 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 SLC25A17O43808 307 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 ADH4P08319 380 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 SRSF9Q13242 221 aaKnown RBP eCLIP4.59□□□□□ -1.67
PTPRD-213ENST00000537002 RIGQ13278 110 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 RSPO4Q2I0M5 234 aaPredicted RBP4.59□□□□□ -1.67
PTPRD-213ENST00000537002 NMSQ5H8A3 153 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 TMEM196Q5HYL7 178 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 PRR31Q5SQ13 230 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 KCNK17Q96T54 332 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 NDFIP1Q9BT67 221 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 COL25A1Q9BXS0 654 aaPredicted RBP4.59□□□□□ -1.67
PTPRD-213ENST00000537002 FREM3P0C091 2139 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.59□□□□□ -1.67
PTPRD-213ENST00000537002 LOC107984156A0A0G2JMH3 177 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 SMIM13P0DJ93 91 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 EGR4Q05215 589 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 ARL17AQ8IVW1 177 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 OR2H1Q9GZK4 316 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 THYN1Q9P016 225 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 FZR1Q9UM11 496 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 TICRRQ7Z2Z1 1910 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 YPEL1O60688 119 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 MT-CO3P00414 261 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 PSG1P11464 419 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 CYB561P49447 251 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 MESP2Q0VG99 397 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 WIPI1Q5MNZ9 446 aaPredicted RBP4.59□□□□□ -1.67
PTPRD-213ENST00000537002 ZNF324BQ6AW86 544 aaPredicted RBP4.59□□□□□ -1.67
PTPRD-213ENST00000537002 ANKRD37Q7Z713 158 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 Q8IYB0 196 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 OR4F17Q8NGA8 305 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 OR10D3Q8NH80 312 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 YPEL2Q96QA6 119 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 LRRC61Q9BV99 259 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 SOX21Q9Y651 276 aaPredicted RBP4.59□□□□□ -1.67
PTPRD-213ENST00000537002 ALPK2Q86TB3 2170 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 MPDZO75970 2070 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 IGHV5-51A0A0C4DH38 117 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 A6NJY4 79 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 DSCR4P56555 118 aaPredicted RBP4.59□□□□□ -1.67
PTPRD-213ENST00000537002 RBPJQ06330 500 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 RTN4RL2Q86UN3 420 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 C5orf17Q8NAS9 161 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 LHFPL6Q9Y693 200 aa4.59□□□□□ -1.67
PTPRD-213ENST00000537002 A1L4Q6 167 aa4.59□□□□□ -1.68
PTPRD-213ENST00000537002 PROB1E7EW31 1015 aa4.59□□□□□ -1.68
PTPRD-213ENST00000537002 ZNF324O75467 553 aaPredicted RBP4.59□□□□□ -1.68
PTPRD-213ENST00000537002 HES1Q14469 280 aa4.59□□□□□ -1.68
PTPRD-213ENST00000537002 CDCP2Q5VXM1 449 aa4.59□□□□□ -1.68
PTPRD-213ENST00000537002 WDR31Q8NA23 367 aa4.59□□□□□ -1.68
PTPRD-213ENST00000537002 OR10AG1Q8NH19 301 aa4.59□□□□□ -1.68
PTPRD-213ENST00000537002 SCARF2Q96GP6 870 aaPredicted RBP4.59□□□□□ -1.68
PTPRD-213ENST00000537002 JKAMPQ9P055 326 aa4.59□□□□□ -1.68
PTPRD-213ENST00000537002 PDE4DIPQ5VU43 2346 aa4.59□□□□□ -1.68
PTPRD-213ENST00000537002 CENPWQ5EE01 88 aa4.59□□□□□ -1.68
PTPRD-213ENST00000537002 SGK494Q96LW2 274 aa4.59□□□□□ -1.68
PTPRD-213ENST00000537002 NPCDR1Q9BY65 106 aa4.59□□□□□ -1.68
PTPRD-213ENST00000537002 TMEM74BQ9NUR3 256 aa4.59□□□□□ -1.68
PTPRD-213ENST00000537002 ELOVL5Q9NYP7 299 aa4.59□□□□□ -1.68
PTPRD-213ENST00000537002 TRPM6Q9BX84 2022 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 ODAMA1E959 279 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 ZIC3O60481 467 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 CD55P08174 381 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 COL9A1P20849 921 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 GPR183P32249 361 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 CCR5P51681 352 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 TMEM108Q6UXF1 575 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 ASCL4Q6XD76 172 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 SAXO1Q8IYX7 474 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 DEFB127Q9H1M4 99 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 DYNLRB1Q9NP97 96 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 PPIAL4DF5H284 164 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 HYPMO75409 117 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 DRD3P35462 400 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 FOXL2P58012 376 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 UCN2Q96RP3 112 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 FANCMQ8IYD8 2048 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 MLNRO43193 412 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 EFEMP2O95967 443 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 CTRLP40313 264 aa4.58□□□□□ -1.68
PTPRD-213ENST00000537002 HIST1H1AQ02539 215 aaPredicted RBP4.58□□□□□ -1.68
PTPRD-213ENST00000537002 ZFP36L1Q07352 338 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms