RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 C4orf36Q96KX1 117 aa4.52□□□□□ -1.69
CCDC60-203ENST00000536742 OR8B4Q96RC9 309 aa4.52□□□□□ -1.69
CCDC60-203ENST00000536742 BCL7BQ9BQE9 202 aa4.52□□□□□ -1.69
CCDC60-203ENST00000536742 OCR1Q9BZK8 76 aa4.52□□□□□ -1.69
CCDC60-203ENST00000536742 RGCCQ9H4X1 137 aa4.52□□□□□ -1.69
CCDC60-203ENST00000536742 RNF167Q9H6Y7 350 aa4.52□□□□□ -1.69
CCDC60-203ENST00000536742 MRPL22Q9NWU5 206 aaKnown RBP4.52□□□□□ -1.69
CCDC60-203ENST00000536742 CKLFQ9UBR5 152 aa4.52□□□□□ -1.69
CCDC60-203ENST00000536742 R4GMQ9 66 aa4.52□□□□□ -1.69
CCDC60-203ENST00000536742 J3QRE1 110 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 M0R135 149 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 RER1O15258 196 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 GATBO75879 557 aaKnown RBP4.51□□□□□ -1.69
CCDC60-203ENST00000536742 ARL6IP5O75915 188 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 UBCP0CG48 685 aaKnown RBP4.51□□□□□ -1.69
CCDC60-203ENST00000536742 LIMS3P0CW19 117 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 LIMS4P0CW20 117 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 ZNF728P0DKX0 622 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 CD36P16671 472 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 GALP22466 123 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 KIR2DS2P43631 304 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 MAP2K4P45985 399 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 FHITP49789 147 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 TMBIM6P55061 237 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 TPBGQ13641 420 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 ENDOGQ14249 297 aaKnown RBP4.51□□□□□ -1.69
CCDC60-203ENST00000536742 ZNF674Q2M3X9 581 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 TP53I3Q53FA7 332 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 YIF1BQ5BJH7 314 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 LAIR2Q6ISS4 152 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 ZNF343Q6P1L6 599 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 ZNF767PQ75MW2 155 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 LINC00596Q86U02 117 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 TGIF2LXQ8IUE1 241 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 C15orf53Q8NAA6 179 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 OR9G4Q8NGQ1 327 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 OR10Z1Q8NGY1 313 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 OR8S1Q8NH09 359 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 RAB2BQ8WUD1 216 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 SLC7A6Q92536 515 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 DGCR14Q96DF8 476 aaKnown RBP4.51□□□□□ -1.69
CCDC60-203ENST00000536742 CPNE2Q96FN4 548 aaPredicted RBP4.51□□□□□ -1.69
CCDC60-203ENST00000536742 ZNF799Q96GE5 643 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 S1PR3Q99500 378 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 PYGO2Q9BRQ0 406 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 EXOSC4Q9NPD3 245 aaKnown RBP4.51□□□□□ -1.69
CCDC60-203ENST00000536742 THYN1Q9P016 225 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 CLEC2DQ9UHP7 191 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 N6AMT1Q9Y5N5 214 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 LHFPL6Q9Y693 200 aa4.51□□□□□ -1.69
CCDC60-203ENST00000536742 IGKV1D-43A0A0B4J1Z2 117 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 CD300LBA8K4G0 201 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 ZNF701M0R085 212 aaPredicted RBP4.5□□□□□ -1.69
CCDC60-203ENST00000536742 PDCD5O14737 125 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 SLC22A1O15245 554 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 MAGEB3O15480 346 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 XRCC2O43543 280 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 AIREO43918 545 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 IFNA5P01569 189 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 ZP3P21754 424 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 MYL9P24844 172 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 SOX6P35712 828 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 DDOSTP39656 456 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 ALDH3B2P48448 385 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 SERPINB10P48595 397 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 CX3CR1P49238 355 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 PRKXP51817 358 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 HCCSP53701 268 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 HIST1H3AP68431 136 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 ZNF85Q03923 595 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 AARDQ4LEZ3 155 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 HIST2H3PS2Q5TEC6 136 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 OR2G6Q5TZ20 316 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 LIPKQ5VXJ0 399 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 HIST2H3AQ71DI3 136 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 TMUB2Q71RG4 321 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 MRPL21Q7Z2W9 205 aaKnown RBP4.5□□□□□ -1.69
CCDC60-203ENST00000536742 CLVS1Q8IUQ0 354 aaPredicted RBP4.5□□□□□ -1.69
CCDC60-203ENST00000536742 ZNF561Q8N587 486 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 BEST4Q8NFU0 473 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 OR1M1Q8NGA1 313 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 OR13F1Q8NGS4 319 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 OR2G2Q8NGZ5 317 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 GPR148Q8TDV2 347 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 C10orf35Q96D05 121 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 SMIM19Q96E16 107 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 PELI1Q96FA3 418 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 SDSLQ96GA7 329 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 SPAG8Q99932 426 aaPredicted RBP4.5□□□□□ -1.69
CCDC60-203ENST00000536742 SLC5A7Q9GZV3 580 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 TMEM133Q9H2Q1 129 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 JPT2Q9H910 190 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 ABCB9Q9NP78 766 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 ZNF355PQ9NSJ1 428 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 PAK1IP1Q9NWT1 392 aaPredicted RBP4.5□□□□□ -1.69
CCDC60-203ENST00000536742 NUFIP1Q9UHK0 495 aaKnown RBP4.5□□□□□ -1.69
CCDC60-203ENST00000536742 OR52A1Q9UKL2 312 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 COPS3Q9UNS2 423 aa4.5□□□□□ -1.69
CCDC60-203ENST00000536742 FOXA2Q9Y261 457 aaPredicted RBP4.5□□□□□ -1.69
CCDC60-203ENST00000536742 PKHD1L1Q86WI1 4243 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms