RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	FAM159A	Q6UWV7	190 aa		13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532	C17orf82	Q86X59	251 aa	Predicted RBP	13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532	PACRG	Q96M98	296 aa	Predicted RBP	13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532	TMEM183B	Q1AE95	376 aa		13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532		H0YL77	283 aa		13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532	WDR25	Q64LD2	544 aa	Predicted RBP	13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532	OR4A47	Q6IF82	309 aa		13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532	ZNF837	Q96EG3	531 aa	Predicted RBP	13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532	GPHA2	Q96T91	129 aa		13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532	ZNF880	Q6PDB4	577 aa		13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532	OR13A1	Q8NGR1	328 aa		13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532	C8orf46	Q8TAG6	207 aa		13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532	MRPL32	Q9BYC8	188 aa	Known RBP	13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532	SMDT1	Q9H4I9	107 aa		13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532	C21orf62	Q9NYP8	219 aa		13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532	PSMB2	P49721	201 aa		13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532	EFNA4	P52798	201 aa		13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532	TMEM218	A2RU14	115 aa		13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532	SMIM8	Q96KF7	97 aa		13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532		H3BQ15	152 aa		13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532	IGKV3-20	P01619	116 aa		13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532	ST6GALNAC3	Q8NDV1	305 aa		13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532	MOB4	Q9Y3A3	225 aa		13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532	PINLYP	A6NC86	204 aa		13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532	GATAD1	Q8WUU5	269 aa		13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532	IGHV3OR16-13	A0A075B7E8	117 aa		13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532	IGHV3-74	A0A0B4J1X5	117 aa		13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532	SRSF9	Q13242	221 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532	OR10D4P	Q8NGN7	298 aa		13.29	□□□□□ -0.28
NCAPD3-213	ENST00000534532	C19orf67	A6NJJ6	358 aa		13.28	□□□□□ -0.28
NCAPD3-213	ENST00000534532	DHRS11	Q6UWP2	260 aa		13.28	□□□□□ -0.28
NCAPD3-213	ENST00000534532	LHFPL5	Q8TAF8	219 aa		13.28	□□□□□ -0.28
NCAPD3-213	ENST00000534532	LINC00114	Q6XXX2	140 aa		13.28	□□□□□ -0.28
NCAPD3-213	ENST00000534532	MYOD1	P15172	320 aa		13.28	□□□□□ -0.28
NCAPD3-213	ENST00000534532	IBA57	Q5T440	356 aa	Known RBP	13.28	□□□□□ -0.28
NCAPD3-213	ENST00000534532	OR5AC2	Q9NZP5	309 aa		13.28	□□□□□ -0.28
NCAPD3-213	ENST00000534532	IGHV1-18	A0A0C4DH31	117 aa		13.28	□□□□□ -0.28
NCAPD3-213	ENST00000534532	TRGC1	P0CF51	173 aa		13.28	□□□□□ -0.28
NCAPD3-213	ENST00000534532	CLDND2	Q8NHS1	167 aa		13.28	□□□□□ -0.28
NCAPD3-213	ENST00000534532	C7orf66	A4D0T2	115 aa		13.27	□□□□□ -0.28
NCAPD3-213	ENST00000534532		M0R3E3	92 aa		13.27	□□□□□ -0.28
NCAPD3-213	ENST00000534532	NDUFB4	O95168	129 aa		13.27	□□□□□ -0.28
NCAPD3-213	ENST00000534532	GTF2H5	Q6ZYL4	71 aa		13.27	□□□□□ -0.28
NCAPD3-213	ENST00000534532	OR8A1	Q8NGG7	326 aa		13.27	□□□□□ -0.28
NCAPD3-213	ENST00000534532	CKS2	P33552	79 aa		13.27	□□□□□ -0.28
NCAPD3-213	ENST00000534532	PLSCR4	Q9NRQ2	329 aa		13.27	□□□□□ -0.28
NCAPD3-213	ENST00000534532	CD99	P14209	185 aa		13.27	□□□□□ -0.29
NCAPD3-213	ENST00000534532	SAMD13	Q5VXD3	122 aa		13.27	□□□□□ -0.29
NCAPD3-213	ENST00000534532	STPG2	Q8N412	459 aa		13.27	□□□□□ -0.29
NCAPD3-213	ENST00000534532	NABP2	Q9BQ15	211 aa		13.27	□□□□□ -0.29
NCAPD3-213	ENST00000534532	CDC42EP3	Q9UKI2	254 aa		13.27	□□□□□ -0.29
NCAPD3-213	ENST00000534532	CCDC88C	Q9P219	2028 aa		13.27	□□□□□ -0.29
NCAPD3-213	ENST00000534532	TM2D1	Q9BX74	207 aa		13.27	□□□□□ -0.29
NCAPD3-213	ENST00000534532	GREB1L	Q9C091	1923 aa	Predicted RBP	13.27	□□□□□ -0.29
NCAPD3-213	ENST00000534532	KIF13B	Q9NQT8	1826 aa		13.27	□□□□□ -0.29
NCAPD3-213	ENST00000534532	CA2	P00918	260 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	IGHV3-48	P01763	117 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	FAM209B	Q5JX69	171 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	WBP1	Q96G27	269 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	MRPL20	Q9BYC9	149 aa	Known RBP	13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	NBR2	O15453	112 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	GPR183	P32249	361 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	HERPUD1	Q15011	391 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	SAPCD1	Q5SSQ6	148 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	OR1N2	Q8NGR9	330 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	TMEM133	Q9H2Q1	129 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	PROB1	E7EW31	1015 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	ZNF324	O75467	553 aa	Predicted RBP	13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	IGHV3-23	P01764	117 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	RPS11	P62280	158 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	CD69	Q07108	199 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	SGMS2	Q8NHU3	365 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	FBLIM1	Q8WUP2	373 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	MRPL13	Q9BYD1	178 aa	Known RBP	13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	CCL3L1	P16619	93 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	C5orf66	Q9H5L9	145 aa		13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.26	□□□□□ -0.29
NCAPD3-213	ENST00000534532	LTBP1	Q14766	1721 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	LOC389332	A0A1B0GUA5	103 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	C7orf77	A4D0Y5	90 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	LYNX1	G3V0Z9	82 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	CEACAM4	O75871	244 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	LYNX1	P0DP58	116 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	MEF2B	Q02080	365 aa	Predicted RBP	13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	FOXF2	Q12947	444 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	TMEM187	Q14656	261 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	ZNF343	Q6P1L6	599 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	IFI27L2	Q9H2X8	130 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	ZNF236	Q9UL36	1845 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	ZNF56	Q15929	161 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	FAM166A	Q6J272	317 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	CLEC19A	Q6UXS0	136 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	C9orf62	Q8N4C0	152 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	WFIKKN1	Q96NZ8	548 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	GPR82	Q96P67	336 aa		13.25	□□□□□ -0.29
NCAPD3-213	ENST00000534532	FOXA2	Q9Y261	457 aa	Predicted RBP	13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms