RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 NPIPB5A8MRT5 1133 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 TEX22C9J3V5 150 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 TNFAIP8O95379 198 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 DHFRP00374 187 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 TRBV12-3P01733 135 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 CRYGCP07315 174 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 CSN3P07498 182 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 FGF2P09038 288 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 ZNF735P0CB33 412 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 RPL27AP46776 148 aaKnown RBP10.21□□□□□ -0.77
CAPN1-228ENST00000534373 MECP2P51608 486 aaKnown RBP10.21□□□□□ -0.77
CAPN1-228ENST00000534373 EXOSC2Q13868 293 aaKnown RBP10.21□□□□□ -0.77
CAPN1-228ENST00000534373 KLK9Q2XQG4 91 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 LCN12Q6JVE5 192 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 SGPP2Q8IWX5 399 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 VKORC1L1Q8N0U8 176 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 Q8N402 240 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 CD300LFQ8TDQ1 290 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 SECTM1Q8WVN6 248 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 CCL28Q9NRJ3 127 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 C19orf73Q9NVV2 129 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 BET1LQ9NYM9 111 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 KLK9Q9UKQ9 250 aa10.21□□□□□ -0.77
CAPN1-228ENST00000534373 HUWE1Q7Z6Z7 4374 aaKnown RBP10.21□□□□□ -0.78
CAPN1-228ENST00000534373 A0A087WXM4 84 aa10.2□□□□□ -0.78
CAPN1-228ENST00000534373 DPPA5A6NC42 116 aa10.2□□□□□ -0.78
CAPN1-228ENST00000534373 HPRT1P00492 218 aa10.2□□□□□ -0.78
CAPN1-228ENST00000534373 PRH1P02810 166 aa10.2□□□□□ -0.78
CAPN1-228ENST00000534373 IL6RP08887 468 aaPredicted RBP10.2□□□□□ -0.78
CAPN1-228ENST00000534373 IGHV4-30-4P0DP06 118 aa10.2□□□□□ -0.78
CAPN1-228ENST00000534373 TAS2R31P59538 309 aa10.2□□□□□ -0.78
CAPN1-228ENST00000534373 RPL8P62917 257 aaKnown RBP10.2□□□□□ -0.78
CAPN1-228ENST00000534373 DEFA5Q01523 94 aa10.2□□□□□ -0.78
CAPN1-228ENST00000534373 CATR1Q13166 79 aa10.2□□□□□ -0.78
CAPN1-228ENST00000534373 POU2AF1Q16633 256 aa10.2□□□□□ -0.78
CAPN1-228ENST00000534373 C15orf32Q32M92 178 aa10.2□□□□□ -0.78
CAPN1-228ENST00000534373 C10orf55Q5SWW7 151 aa10.2□□□□□ -0.78
CAPN1-228ENST00000534373 DHRS11Q6UWP2 260 aa10.2□□□□□ -0.78
CAPN1-228ENST00000534373 SPAG16Q8N0X2 631 aa10.2□□□□□ -0.78
CAPN1-228ENST00000534373 TSPAN14Q8NG11 270 aa10.2□□□□□ -0.78
CAPN1-228ENST00000534373 RCHY1Q96PM5 261 aa10.2□□□□□ -0.78
CAPN1-228ENST00000534373 SLC5A7Q9GZV3 580 aa10.2□□□□□ -0.78
CAPN1-228ENST00000534373 HMX3A6NHT5 357 aa10.19□□□□□ -0.78
CAPN1-228ENST00000534373 BMPR1BO00238 502 aa10.19□□□□□ -0.78
CAPN1-228ENST00000534373 OR2J3O76001 311 aa10.19□□□□□ -0.78
CAPN1-228ENST00000534373 HIST1H1BP16401 226 aaKnown RBP10.19□□□□□ -0.78
CAPN1-228ENST00000534373 PSMB6P28072 239 aa10.19□□□□□ -0.78
CAPN1-228ENST00000534373 RPS19P39019 145 aaKnown RBP10.19□□□□□ -0.78
CAPN1-228ENST00000534373 UBE2NLQ5JXB2 153 aa10.19□□□□□ -0.78
CAPN1-228ENST00000534373 GTSCR1Q86UQ5 136 aa10.19□□□□□ -0.78
CAPN1-228ENST00000534373 HAPLN4Q86UW8 402 aa10.19□□□□□ -0.78
CAPN1-228ENST00000534373 YIPF6Q96EC8 236 aa10.19□□□□□ -0.78
CAPN1-228ENST00000534373 FYTTD1Q96QD9 318 aaKnown RBP10.19□□□□□ -0.78
CAPN1-228ENST00000534373 SRSF8Q9BRL6 282 aaKnown RBP10.19□□□□□ -0.78
CAPN1-228ENST00000534373 TM2D3Q9BRN9 247 aa10.19□□□□□ -0.78
CAPN1-228ENST00000534373 PLEKHA2Q9HB19 425 aa10.19□□□□□ -0.78
CAPN1-228ENST00000534373 ADAM30Q9UKF2 790 aa10.19□□□□□ -0.78
CAPN1-228ENST00000534373 STAB2Q8WWQ8 2551 aa10.19□□□□□ -0.78
CAPN1-228ENST00000534373 NBEAL2Q6ZNJ1 2754 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 E7EUB6 86 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 LGALS9O00182 355 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 TNFSF12O43508 249 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 GGCTO75223 188 aaKnown RBP10.18□□□□□ -0.78
CAPN1-228ENST00000534373 PTHLHP12272 177 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 NQO2P16083 231 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 CTRB1P17538 263 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 HLA-GP17693 338 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 CTRB2Q6GPI1 263 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 OR4A47Q6IF82 309 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 SSX9Q7RTT3 188 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 GPHB5Q86YW7 130 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 LAX1Q8IWV1 398 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 CADM3Q8N126 398 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 FANCD2OSQ96PS1 177 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 GPHA2Q96T91 129 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 THAP7Q9BT49 309 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-228ENST00000534373 IFT46Q9NQC8 304 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 FBXL7Q9UJT9 491 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 ANAPC10Q9UM13 185 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 DMRT1Q9Y5R6 373 aa10.18□□□□□ -0.78
CAPN1-228ENST00000534373 SULT1C2O00338 296 aa10.17□□□□□ -0.78
CAPN1-228ENST00000534373 NAT1P18440 290 aa10.17□□□□□ -0.78
CAPN1-228ENST00000534373 GNRHRP30968 328 aa10.17□□□□□ -0.78
CAPN1-228ENST00000534373 FXYD4P59646 89 aa10.17□□□□□ -0.78
CAPN1-228ENST00000534373 HERV-K104P61576 105 aa10.17□□□□□ -0.78
CAPN1-228ENST00000534373 TMEM69Q5SWH9 247 aa10.17□□□□□ -0.78
CAPN1-228ENST00000534373 ZNF818PQ6ZRF7 136 aa10.17□□□□□ -0.78
CAPN1-228ENST00000534373 SAMD12Q8N8I0 201 aa10.17□□□□□ -0.78
CAPN1-228ENST00000534373 SLC25A46Q96AG3 418 aa10.17□□□□□ -0.78
CAPN1-228ENST00000534373 CMTM3Q96MX0 182 aa10.17□□□□□ -0.78
CAPN1-228ENST00000534373 HRASLSQ9HDD0 168 aa10.17□□□□□ -0.78
CAPN1-228ENST00000534373 TRBV7-1A0A0A6YYK4 115 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 A0A1B0GW64 132 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 UPK2O00526 184 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 DEFA4P12838 97 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 PRSS3P35030 304 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 TAS2R46P59540 309 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 TAS2R20P59543 309 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 OR2B8PP59922 312 aa10.16□□□□□ -0.78
CAPN1-228ENST00000534373 THOC7Q6I9Y2 204 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms