RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 TMEM17Q86X19 198 aa11.95□□□□□ -0.5
UBXN1-217ENST00000534176 TTC9CQ8N5M4 171 aa11.95□□□□□ -0.5
UBXN1-217ENST00000534176 ADAD2Q8NCV1 583 aaKnown RBP11.95□□□□□ -0.5
UBXN1-217ENST00000534176 OR6Q1Q8NGQ2 317 aa11.95□□□□□ -0.5
UBXN1-217ENST00000534176 RAB2BQ8WUD1 216 aa11.95□□□□□ -0.5
UBXN1-217ENST00000534176 OR5B12Q96R08 314 aa11.95□□□□□ -0.5
UBXN1-217ENST00000534176 ZNF2Q9BSG1 426 aaPredicted RBP11.95□□□□□ -0.5
UBXN1-217ENST00000534176 TGP01266 2768 aa11.94□□□□□ -0.5
UBXN1-217ENST00000534176 DPPA5A6NC42 116 aa11.94□□□□□ -0.5
UBXN1-217ENST00000534176 FAM25AB3EWG3 89 aa11.94□□□□□ -0.5
UBXN1-217ENST00000534176 FAM25CB3EWG5 89 aa11.94□□□□□ -0.5
UBXN1-217ENST00000534176 FAM25GB3EWG6 89 aa11.94□□□□□ -0.5
UBXN1-217ENST00000534176 RPL27AP46776 148 aaKnown RBP11.94□□□□□ -0.5
UBXN1-217ENST00000534176 ALDH3B2P48448 385 aa11.94□□□□□ -0.5
UBXN1-217ENST00000534176 MRPS10P82664 201 aaKnown RBP11.94□□□□□ -0.5
UBXN1-217ENST00000534176 MRGPRG-AS1Q2M3A8 158 aa11.94□□□□□ -0.5
UBXN1-217ENST00000534176 OR2B11Q5JQS5 317 aa11.94□□□□□ -0.5
UBXN1-217ENST00000534176 AADACL3Q5VUY0 350 aa11.94□□□□□ -0.5
UBXN1-217ENST00000534176 ZNF818PQ6ZRF7 136 aa11.94□□□□□ -0.5
UBXN1-217ENST00000534176 HSD17B13Q7Z5P4 300 aaPredicted RBP11.94□□□□□ -0.5
UBXN1-217ENST00000534176 NECAP1Q8NC96 275 aa11.94□□□□□ -0.5
UBXN1-217ENST00000534176 DCUN1D4Q92564 292 aa11.94□□□□□ -0.5
UBXN1-217ENST00000534176 OR4C12Q96R67 309 aa11.94□□□□□ -0.5
UBXN1-217ENST00000534176 PRKDCP78527 4128 aaKnown RBP11.93□□□□□ -0.5
UBXN1-217ENST00000534176 MEIS3P1A6NDR6 274 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 NPIPB5A8MRT5 1133 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 K7EIL1 84 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 GPR31O00270 319 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 HPGDSO60760 199 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 NOL3O60936 208 aaKnown RBP11.93□□□□□ -0.5
UBXN1-217ENST00000534176 PTHLHP12272 177 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 HIST1H1BP16401 226 aaKnown RBP11.93□□□□□ -0.5
UBXN1-217ENST00000534176 ELK1P19419 428 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 GNRHRP30968 328 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 HRH1P35367 487 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 RFX2P48378 723 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 TMBIM6P55061 237 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 ERVK-16P61578 105 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 SSBP1Q04837 148 aaKnown RBP11.93□□□□□ -0.5
UBXN1-217ENST00000534176 DEFB121Q5J5C9 76 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 VAX1Q5SQQ9 334 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 ASPHD1Q5U4P2 390 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 ZNF343Q6P1L6 599 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 ACSM6Q6P461 480 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 SLC2A9Q9NRM0 540 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 PEF1Q9UBV8 284 aaKnown RBP11.93□□□□□ -0.5
UBXN1-217ENST00000534176 SCOCQ9UIL1 159 aa11.93□□□□□ -0.5
UBXN1-217ENST00000534176 ZNF256Q9Y2P7 627 aaPredicted RBP11.93□□□□□ -0.5
UBXN1-217ENST00000534176 IGHV4OR15-8A0A075B7B6 117 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 A0A087WW49 117 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 TRBV9A0A0B4J1U6 114 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 TNFSF12O43508 249 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 SAP30O75446 220 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 IGHV3-11P01762 117 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 PMP2P02689 132 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 IFNA6P05013 189 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 ZNF735P0CB33 412 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 HLA-GP17693 338 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 F2RP25116 425 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 UCP3P55916 312 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 SNX29P2Q8IUI4 249 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 SLC38A6Q8IZM9 456 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 ARRDC1Q8N5I2 433 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 CASTOR1Q8WTX7 329 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 DLX4Q92988 240 aaPredicted RBP11.92□□□□□ -0.5
UBXN1-217ENST00000534176 COMMD5Q9GZQ3 224 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 HRASLSQ9HDD0 168 aa11.92□□□□□ -0.5
UBXN1-217ENST00000534176 HLA-DMAP28067 261 aa11.91□□□□□ -0.5
UBXN1-217ENST00000534176 ECI1P42126 302 aa11.91□□□□□ -0.5
UBXN1-217ENST00000534176 RPL5P46777 297 aaKnown RBP11.91□□□□□ -0.5
UBXN1-217ENST00000534176 BRWD1-AS2P59051 145 aa11.91□□□□□ -0.5
UBXN1-217ENST00000534176 ATP5G2Q06055 141 aa11.91□□□□□ -0.5
UBXN1-217ENST00000534176 OR4A47Q6IF82 309 aa11.91□□□□□ -0.5
UBXN1-217ENST00000534176 LYSMD2Q8IV50 215 aa11.91□□□□□ -0.5
UBXN1-217ENST00000534176 DMBX1Q8NFW5 382 aa11.91□□□□□ -0.5
UBXN1-217ENST00000534176 OR51H1Q8NH63 302 aa11.91□□□□□ -0.5
UBXN1-217ENST00000534176 DGCR14Q96DF8 476 aaKnown RBP11.91□□□□□ -0.5
UBXN1-217ENST00000534176 ZNF486Q96H40 463 aaPredicted RBP11.91□□□□□ -0.5
UBXN1-217ENST00000534176 TSC22D3Q99576 134 aa11.91□□□□□ -0.5
UBXN1-217ENST00000534176 ALX4Q9H161 411 aaPredicted RBP11.91□□□□□ -0.5
UBXN1-217ENST00000534176 FKBP11Q9NYL4 201 aa11.91□□□□□ -0.5
UBXN1-217ENST00000534176 THYN1Q9P016 225 aa11.91□□□□□ -0.5
UBXN1-217ENST00000534176 WI2-2373I1.2A0A1W2PRP0 233 aa11.9□□□□□ -0.5
UBXN1-217ENST00000534176 MARCH11A6NNE9 402 aa11.9□□□□□ -0.5
UBXN1-217ENST00000534176 PGLYRP1O75594 196 aaPredicted RBP11.9□□□□□ -0.5
UBXN1-217ENST00000534176 FCER2P06734 321 aa11.9□□□□□ -0.5
UBXN1-217ENST00000534176 CRYGCP07315 174 aa11.9□□□□□ -0.5
UBXN1-217ENST00000534176 SLURP1P55000 103 aa11.9□□□□□ -0.5
UBXN1-217ENST00000534176 RHOGP84095 191 aa11.9□□□□□ -0.5
UBXN1-217ENST00000534176 RPEL1Q2QD12 228 aa11.9□□□□□ -0.5
UBXN1-217ENST00000534176 KLK9Q2XQG4 91 aa11.9□□□□□ -0.5
UBXN1-217ENST00000534176 VKORC1L1Q8N0U8 176 aa11.9□□□□□ -0.5
UBXN1-217ENST00000534176 FCAMRQ8WWV6 532 aa11.9□□□□□ -0.5
UBXN1-217ENST00000534176 B9D2Q9BPU9 175 aa11.9□□□□□ -0.5
UBXN1-217ENST00000534176 SIGLEC8Q9NYZ4 499 aa11.9□□□□□ -0.5
UBXN1-217ENST00000534176 CCDC59Q9P031 241 aaKnown RBP11.9□□□□□ -0.5
UBXN1-217ENST00000534176 PEMTQ9UBM1 199 aa11.9□□□□□ -0.5
UBXN1-217ENST00000534176 EXTL2Q9UBQ6 330 aa11.9□□□□□ -0.5
UBXN1-217ENST00000534176 KLK9Q9UKQ9 250 aa11.9□□□□□ -0.5
UBXN1-217ENST00000534176 TNCP24821 2201 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms