RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 FXYD3Q14802 87 aa6.78□□□□□ -1.32
COPB1-210ENST00000533533 TNXAQ16473 311 aa6.78□□□□□ -1.32
COPB1-210ENST00000533533 C9orf66Q5T8R8 295 aa6.78□□□□□ -1.32
COPB1-210ENST00000533533 FAAP20Q6NZ36 180 aa6.78□□□□□ -1.32
COPB1-210ENST00000533533 STEAP1BQ6NZ63 245 aa6.78□□□□□ -1.32
COPB1-210ENST00000533533 LPCAT3Q6P1A2 487 aa6.78□□□□□ -1.32
COPB1-210ENST00000533533 TMEM65Q6PI78 240 aa6.78□□□□□ -1.32
COPB1-210ENST00000533533 UNQ5815/PRO19632Q6UWF5 114 aa6.78□□□□□ -1.32
COPB1-210ENST00000533533 TMEM229BQ8NBD8 167 aa6.78□□□□□ -1.32
COPB1-210ENST00000533533 OR5M8Q8NGP6 311 aa6.78□□□□□ -1.32
COPB1-210ENST00000533533 SMIM4Q8WVI0 70 aa6.78□□□□□ -1.32
COPB1-210ENST00000533533 ARPC1AQ92747 370 aa6.78□□□□□ -1.32
COPB1-210ENST00000533533 DGCR14Q96DF8 476 aaKnown RBP6.78□□□□□ -1.32
COPB1-210ENST00000533533 ASCL2Q99929 193 aa6.78□□□□□ -1.32
COPB1-210ENST00000533533 NXF2Q9GZY0 626 aaKnown RBP6.78□□□□□ -1.32
COPB1-210ENST00000533533 ZNF355PQ9NSJ1 428 aa6.78□□□□□ -1.32
COPB1-210ENST00000533533 NDUFA13Q9P0J0 144 aa6.78□□□□□ -1.32
COPB1-210ENST00000533533 HUWE1Q7Z6Z7 4374 aaKnown RBP6.77□□□□□ -1.33
COPB1-210ENST00000533533 SEC14L6B5MCN3 397 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 DISC1C4P0D8 188 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 MPPED1O15442 326 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 PGLYRP1O75594 196 aaPredicted RBP6.77□□□□□ -1.33
COPB1-210ENST00000533533 HRASP01112 189 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 IGLV2-23P01705 113 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 IGF1P05019 195 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 SAA1P0DJI8 122 aaPredicted RBP6.77□□□□□ -1.33
COPB1-210ENST00000533533 APELAP0DMC3 54 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 RPA2P15927 270 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 TBPP20226 339 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 CD40LGP29965 261 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 ECI1P42126 302 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 UBE2KP61086 200 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 MSMO1Q15800 293 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 DEFB136Q30KP8 78 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 CASC10Q5T4H9 136 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 ZNF562Q6V9R5 426 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 SLC38A6Q8IZM9 456 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 RNF152Q8N8N0 203 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 TEX45Q8NA69 505 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 LFNGQ8NES3 379 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 DMBX1Q8NFW5 382 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 OR4D10Q8NGI6 311 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 MUC7Q8TAX7 377 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 CASTOR1Q8WTX7 329 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 HRASLSQ9HDD0 168 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 MCUBQ9NWR8 336 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 FBXO7Q9Y3I1 522 aa6.77□□□□□ -1.33
COPB1-210ENST00000533533 RYR2Q92736 4967 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 ARPC1BO15143 372 aaKnown RBP6.76□□□□□ -1.33
COPB1-210ENST00000533533 CTDSPLO15194 276 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 CREBL2O60519 120 aaPredicted RBP6.76□□□□□ -1.33
COPB1-210ENST00000533533 OR2A4O95047 310 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 S1PR2O95136 353 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 CRYGBP07316 175 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 ELANEP08246 267 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 AKAIN1P0CW23 69 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 PI3P19957 117 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 CDX1P47902 265 aaPredicted RBP6.76□□□□□ -1.33
COPB1-210ENST00000533533 ERVK-16P61578 105 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 SSBP1Q04837 148 aaKnown RBP6.76□□□□□ -1.33
COPB1-210ENST00000533533 FOXE3Q13461 319 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 EIF4EBP1Q13541 118 aaPredicted RBP6.76□□□□□ -1.33
COPB1-210ENST00000533533 MEF2DQ14814 521 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 PRSS8Q16651 343 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 SPANXN2Q5MJ10 180 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 TBC1D26Q86UD7 250 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 MMD2Q8IY49 270 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 ARRDC1Q8N5I2 433 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 OR5T1Q8NG75 326 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 VSTM2AQ8TAG5 236 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 CD300LFQ8TDQ1 290 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 RHOVQ96L33 236 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 MS4A10Q96PG2 267 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 OR5B12Q96R08 314 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 OR2A7Q96R45 310 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 AIFM2Q9BRQ8 373 aa6.76□□□□□ -1.33
COPB1-210ENST00000533533 THAP7Q9BT49 309 aaPredicted RBP6.76□□□□□ -1.33
COPB1-210ENST00000533533 FOXA2Q9Y261 457 aaPredicted RBP6.76□□□□□ -1.33
COPB1-210ENST00000533533 ZNF256Q9Y2P7 627 aaPredicted RBP6.76□□□□□ -1.33
COPB1-210ENST00000533533 MSGN1A6NI15 193 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 GSTZ1O43708 216 aaPredicted RBP6.75□□□□□ -1.33
COPB1-210ENST00000533533 HPRT1P00492 218 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 IGHG4P01861 327 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 CD74P04233 296 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 EGR2P11161 476 aaPredicted RBP6.75□□□□□ -1.33
COPB1-210ENST00000533533 F2RP25116 425 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 LPAR6P43657 344 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 INPP1P49441 399 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 BRWD1-AS2P59051 145 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 TPPP2P59282 170 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 CFHR3Q02985 330 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 FHL3Q13643 280 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 C10orf55Q5SWW7 151 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 Q8N402 240 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 TCTEX1D1Q8N7M0 179 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 OR4C16Q8NGL9 310 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 TERB2Q8NHR7 220 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 MARCH1Q8TCQ1 289 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 C4orf3Q8WVX3 66 aa6.75□□□□□ -1.33
COPB1-210ENST00000533533 SRSF12Q8WXF0 261 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms