RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 TMEM106BQ9NUM4 274 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 IQCF6A8MYZ5 107 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 CLPSP04118 112 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 UNQ5815/PRO19632Q6UWF5 114 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 PNKDQ8N490 385 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 COL6A6A6NMZ7 2263 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 THSD7BQ9C0I4 1608 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 TGIF2-C20orf24A0A0A6YYL0 155 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 LOXL3P58215 753 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 NABP2Q9BQ15 211 aa14.84□□□□□ -0.03
PHRF1-205ENST00000533464 SMUG1Q53HV7 270 aa14.83□□□□□ -0.03
PHRF1-205ENST00000533464 PARLQ9H300 379 aa14.83□□□□□ -0.03
PHRF1-205ENST00000533464 DOCK8Q8NF50 2099 aa14.83□□□□□ -0.04
PHRF1-205ENST00000533464 LIPFP07098 398 aa14.83□□□□□ -0.04
PHRF1-205ENST00000533464 CRYBB3P26998 211 aa14.83□□□□□ -0.04
PHRF1-205ENST00000533464 APOBEC3AP31941 199 aaPredicted RBP14.83□□□□□ -0.04
PHRF1-205ENST00000533464 HOXA4Q00056 320 aaPredicted RBP14.83□□□□□ -0.04
PHRF1-205ENST00000533464 PLPPR1Q8TBJ4 325 aa14.83□□□□□ -0.04
PHRF1-205ENST00000533464 MAP1LC3CQ9BXW4 147 aa14.83□□□□□ -0.04
PHRF1-205ENST00000533464 LY6G6FQ5SQ64 297 aa14.83□□□□□ -0.04
PHRF1-205ENST00000533464 VN1R17PQ8TDU5 208 aa14.83□□□□□ -0.04
PHRF1-205ENST00000533464 LOC105371242A0A075B767 164 aa14.83□□□□□ -0.04
PHRF1-205ENST00000533464 NUBP1P53384 320 aa14.83□□□□□ -0.04
PHRF1-205ENST00000533464 STPG3Q8N7X2 389 aa14.83□□□□□ -0.04
PHRF1-205ENST00000533464 CA2P00918 260 aa14.82□□□□□ -0.04
PHRF1-205ENST00000533464 FCGR2BP31994 310 aaPredicted RBP14.82□□□□□ -0.04
PHRF1-205ENST00000533464 GFRA1P56159 465 aa14.82□□□□□ -0.04
PHRF1-205ENST00000533464 FAM57AQ8TBR7 257 aa14.82□□□□□ -0.04
PHRF1-205ENST00000533464 VPS25Q9BRG1 176 aa14.82□□□□□ -0.04
PHRF1-205ENST00000533464 IGKV1D-13A0A0B4J2D9 117 aa14.82□□□□□ -0.04
PHRF1-205ENST00000533464 IGKV1-13P0DP09 117 aa14.82□□□□□ -0.04
PHRF1-205ENST00000533464 CD59P13987 128 aa14.82□□□□□ -0.04
PHRF1-205ENST00000533464 OR51G1Q8NGK1 321 aa14.82□□□□□ -0.04
PHRF1-205ENST00000533464 PAM16Q9Y3D7 125 aa14.82□□□□□ -0.04
PHRF1-205ENST00000533464 A0A0A6YYD4 124 aa14.82□□□□□ -0.04
PHRF1-205ENST00000533464 EGR1P18146 543 aa14.82□□□□□ -0.04
PHRF1-205ENST00000533464 FOXG1P55316 489 aaPredicted RBP14.82□□□□□ -0.04
PHRF1-205ENST00000533464 FOXD3Q9UJU5 478 aaPredicted RBP14.82□□□□□ -0.04
PHRF1-205ENST00000533464 TCF20Q9UGU0 1960 aaKnown RBP14.82□□□□□ -0.04
PHRF1-205ENST00000533464 BSPH1Q075Z2 132 aa14.82□□□□□ -0.04
PHRF1-205ENST00000533464 KLRB1Q12918 225 aa14.82□□□□□ -0.04
PHRF1-205ENST00000533464 SPSB4Q96A44 273 aa14.82□□□□□ -0.04
PHRF1-205ENST00000533464 PI4KAP42356 2102 aa14.82□□□□□ -0.04
PHRF1-205ENST00000533464 M0R143 59 aa14.81□□□□□ -0.04
PHRF1-205ENST00000533464 AGAP20933 346 aa14.81□□□□□ -0.04
PHRF1-205ENST00000533464 COMPP49747 757 aaPredicted RBP14.81□□□□□ -0.04
PHRF1-205ENST00000533464 Q1RN00 199 aa14.81□□□□□ -0.04
PHRF1-205ENST00000533464 RNF126Q9BV68 326 aa14.81□□□□□ -0.04
PHRF1-205ENST00000533464 PF4V1P10720 104 aa14.81□□□□□ -0.04
PHRF1-205ENST00000533464 CRYGSP22914 178 aa14.81□□□□□ -0.04
PHRF1-205ENST00000533464 PEAR1Q5VY43 1037 aaPredicted RBP14.81□□□□□ -0.04
PHRF1-205ENST00000533464 DNM1P46Q6ZS02 220 aa14.81□□□□□ -0.04
PHRF1-205ENST00000533464 TRBV6-7A0A0A0MS04 114 aa14.81□□□□□ -0.04
PHRF1-205ENST00000533464 H3BTX0 84 aa14.81□□□□□ -0.04
PHRF1-205ENST00000533464 MT-ND6P03923 174 aa14.81□□□□□ -0.04
PHRF1-205ENST00000533464 C1QTNF12Q5T7M4 302 aa14.81□□□□□ -0.04
PHRF1-205ENST00000533464 IGKV1D-8A0A087WSZ0 117 aa14.81□□□□□ -0.04
PHRF1-205ENST00000533464 MFAP4P55083 255 aa14.81□□□□□ -0.04
PHRF1-205ENST00000533464 OR51M1Q9H341 326 aa14.81□□□□□ -0.04
PHRF1-205ENST00000533464 BET1LQ9NYM9 111 aa14.81□□□□□ -0.04
PHRF1-205ENST00000533464 ZSWIM8A7E2V4 1837 aa14.81□□□□□ -0.04
PHRF1-205ENST00000533464 FXYD3Q14802 87 aa14.8□□□□□ -0.04
PHRF1-205ENST00000533464 KBTBD11-OT1A0A1B0GTJ5 212 aa14.8□□□□□ -0.04
PHRF1-205ENST00000533464 CXorf65A6NEN9 183 aa14.8□□□□□ -0.04
PHRF1-205ENST00000533464 SPANXN1Q5VSR9 72 aa14.8□□□□□ -0.04
PHRF1-205ENST00000533464 SGK494Q96LW2 274 aa14.8□□□□□ -0.04
PHRF1-205ENST00000533464 RRHO14718 337 aa14.8□□□□□ -0.04
PHRF1-205ENST00000533464 PCSK4Q6UW60 755 aa14.8□□□□□ -0.04
PHRF1-205ENST00000533464 GGNQ86UU5 652 aa14.8□□□□□ -0.04
PHRF1-205ENST00000533464 NPCDR1Q9BY65 106 aa14.8□□□□□ -0.04
PHRF1-205ENST00000533464 HSPB7Q9UBY9 170 aa14.8□□□□□ -0.04
PHRF1-205ENST00000533464 SS18L1O75177 396 aaPredicted RBP14.8□□□□□ -0.04
PHRF1-205ENST00000533464 TMEM97Q5BJF2 176 aa14.8□□□□□ -0.04
PHRF1-205ENST00000533464 RBPMS2Q6ZRY4 209 aaKnown RBP14.8□□□□□ -0.04
PHRF1-205ENST00000533464 OR4C5Q8NGB2 326 aa14.8□□□□□ -0.04
PHRF1-205ENST00000533464 TMEM56-RWDD3S4R434 201 aa14.8□□□□□ -0.04
PHRF1-205ENST00000533464 PPOXP50336 477 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 TRBV23-1A0A0A0MS06 115 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 GATAD1Q8WUU5 269 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 SPRR3Q9UBC9 169 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 ZNF506Q5JVG8 444 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 OR8A1Q8NGG7 326 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 HIST1H2BAQ96A08 127 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 NABP1Q96AH0 204 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 TBX15Q96SF7 602 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 THADAQ6YHU6 1953 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 DOPEY2Q9Y3R5 2298 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 A8MXK9 166 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 J3QR89 54 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 MGPP08493 103 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 GCHFRP30047 84 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 DGAT2L7PQ6IED9 249 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 OSR1Q8TAX0 266 aaPredicted RBP14.79□□□□□ -0.04
PHRF1-205ENST00000533464 IGKV1-12A0A0C4DH73 117 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 TMEM189A5PLL7 270 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 IGKV1D-12P01611 117 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 TMEM78Q5T7P6 136 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 OR4A47Q6IF82 309 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 C19orf24Q9BVV8 132 aa14.79□□□□□ -0.04
PHRF1-205ENST00000533464 PKDREJQ9NTG1 2253 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms