RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 HAPLN4Q86UW8 402 aa6.69□□□□□ -1.34
NEDD8-207ENST00000533242 TPRX1Q8N7U7 411 aa6.69□□□□□ -1.34
NEDD8-207ENST00000533242 OR8B3Q8NGG8 313 aa6.69□□□□□ -1.34
NEDD8-207ENST00000533242 OR8B2Q96RD0 313 aa6.69□□□□□ -1.34
NEDD8-207ENST00000533242 RIMS4Q9H426 269 aaPredicted RBP6.69□□□□□ -1.34
NEDD8-207ENST00000533242 MBNL3Q9NUK0 354 aaKnown RBP6.69□□□□□ -1.34
NEDD8-207ENST00000533242 CACNG5Q9UF02 275 aa6.69□□□□□ -1.34
NEDD8-207ENST00000533242 TRAPPC2LQ9UL33 140 aa6.69□□□□□ -1.34
NEDD8-207ENST00000533242 C7orf77A4D0Y5 90 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 IQCF6A8MYZ5 107 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 TXNL1O43396 289 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 RAMP3O60896 148 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 SNRNP70P08621 437 aaKnown RBP6.68□□□□□ -1.34
NEDD8-207ENST00000533242 IAPPP10997 89 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 VAMP2P63027 116 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 ZNF146Q15072 292 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 PEA15Q15121 130 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 PRAMEF6Q5VXH4 476 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 DRAM1Q8N682 238 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 OR1L1Q8NH94 360 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 LINC01006Q8NI28 216 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 SSMEM1Q8WWF3 244 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 OR2V2Q96R30 315 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 SPIN2AQ99865 258 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 SPIN2BQ9BPZ2 258 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 GCM1Q9NP62 436 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 RPS10P5Q9NQ39 176 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 MLXQ9UH92 298 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 RNF150Q9ULK6 438 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 TET2Q6N021 2002 aaPredicted RBP6.68□□□□□ -1.34
NEDD8-207ENST00000533242 PRKDCP78527 4128 aaKnown RBP6.68□□□□□ -1.34
NEDD8-207ENST00000533242 DUXBA0A1W2PPF3 345 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 NPIPB11E5RHQ5 1161 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 ARG1P05089 322 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 SERPINE2P07093 398 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 CEACAM6P40199 344 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 BRWD1-AS2P59051 145 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 RPL30P62888 115 aaKnown RBP6.68□□□□□ -1.34
NEDD8-207ENST00000533242 AESQ08117 197 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 ZNF266Q14584 549 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 BEAN1Q3B7T3 259 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 OR2B11Q5JQS5 317 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 RUSC1-AS1Q66K80 236 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 IL22RA2Q969J5 263 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 RSG1Q9BU20 258 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 VSIRQ9H7M9 311 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 UFSP2Q9NUQ7 469 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 KPTNQ9Y664 436 aa6.68□□□□□ -1.34
NEDD8-207ENST00000533242 WNK1Q9H4A3 2382 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 A6NLC8 198 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 UMAD1C9J7I0 102 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 HSPA12AO43301 675 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 ENSAO43768 121 aaKnown RBP6.67□□□□□ -1.34
NEDD8-207ENST00000533242 PTBP3O95758 552 aaKnown RBP6.67□□□□□ -1.34
NEDD8-207ENST00000533242 HAND1O96004 215 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 RAC2P15153 192 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 RAB13P51153 203 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 HABP2Q14520 560 aaPredicted RBP6.67□□□□□ -1.34
NEDD8-207ENST00000533242 OR8G1Q15617 311 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 HMGN3Q15651 99 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 KPRPQ5T749 579 aaPredicted RBP6.67□□□□□ -1.34
NEDD8-207ENST00000533242 SSX7Q7RTT5 188 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 OR52L2PQ8NGH6 319 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 FAM110DQ8TAY7 271 aaPredicted RBP6.67□□□□□ -1.34
NEDD8-207ENST00000533242 HIST1H2BAQ96A08 127 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 COQ2Q96H96 371 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 MEGF10Q96KG7 1140 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 DCTN5Q9BTE1 182 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 HES4Q9HCC6 221 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 STRAPQ9Y3F4 350 aaKnown RBP6.67□□□□□ -1.34
NEDD8-207ENST00000533242 NOTCH1P46531 2555 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 A0A1W2PPE2 198 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 A0A1W2PPE3 182 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 A0A1W2PPH5 198 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 C12orf77C9JDV5 145 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 CYB5R3P00387 301 aaPredicted RBP6.67□□□□□ -1.34
NEDD8-207ENST00000533242 METTL15P1P0C7V9 234 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 CFHR2P36980 270 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 RPL35P42766 123 aaKnown RBP6.67□□□□□ -1.34
NEDD8-207ENST00000533242 OR3A1P47881 315 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 RAB5CP51148 216 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 WDR25Q64LD2 544 aaPredicted RBP6.67□□□□□ -1.34
NEDD8-207ENST00000533242 LINC00518Q8N0U6 118 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 C1orf87Q8N0U7 546 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 ABHD14BQ96IU4 210 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 SLC25A31Q9H0C2 315 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 C16orf95Q9H693 158 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 CLN8Q9UBY8 286 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 POLDIP2Q9Y2S7 368 aa6.67□□□□□ -1.34
NEDD8-207ENST00000533242 A0A1B0GU03 582 aa6.66□□□□□ -1.34
NEDD8-207ENST00000533242 hCG_1809904A0A1W2PP81 198 aa6.66□□□□□ -1.34
NEDD8-207ENST00000533242 A0A1W2PR64 198 aa6.66□□□□□ -1.34
NEDD8-207ENST00000533242 A0A1W2PRV1 198 aa6.66□□□□□ -1.34
NEDD8-207ENST00000533242 LRRC30A6NM36 301 aa6.66□□□□□ -1.34
NEDD8-207ENST00000533242 M0R036 132 aa6.66□□□□□ -1.34
NEDD8-207ENST00000533242 SSTR5P35346 364 aa6.66□□□□□ -1.34
NEDD8-207ENST00000533242 HNF4GQ14541 408 aa6.66□□□□□ -1.34
NEDD8-207ENST00000533242 WDR82Q6UXN9 313 aa6.66□□□□□ -1.34
NEDD8-207ENST00000533242 REC114Q7Z4M0 266 aa6.66□□□□□ -1.34
NEDD8-207ENST00000533242 THNSL2Q86YJ6 484 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms