RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 BORCS5Q969J3 196 aa23.28■■□□□ 1.32
SSSCA1-207ENST00000533115 AIFM2Q9BRQ8 373 aa23.28■■□□□ 1.32
SSSCA1-207ENST00000533115 RBMXL2O75526 392 aaKnown RBP23.27■■□□□ 1.32
SSSCA1-207ENST00000533115 ZP3P21754 424 aa23.27■■□□□ 1.32
SSSCA1-207ENST00000533115 GNRHRP30968 328 aa23.27■■□□□ 1.32
SSSCA1-207ENST00000533115 GPR107Q5VW38 600 aa23.27■■□□□ 1.32
SSSCA1-207ENST00000533115 ZNF343Q6P1L6 599 aa23.27■■□□□ 1.32
SSSCA1-207ENST00000533115 LYSMD2Q8IV50 215 aa23.27■■□□□ 1.32
SSSCA1-207ENST00000533115 MOB3AQ96BX8 217 aa23.27■■□□□ 1.32
SSSCA1-207ENST00000533115 SCPEP1Q9HB40 452 aa23.27■■□□□ 1.32
SSSCA1-207ENST00000533115 RPL27AP46776 148 aaKnown RBP23.26■■□□□ 1.31
SSSCA1-207ENST00000533115 MZT2AQ6P582 158 aa23.26■■□□□ 1.31
SSSCA1-207ENST00000533115 SNX29P2Q8IUI4 249 aa23.26■■□□□ 1.31
SSSCA1-207ENST00000533115 B9D2Q9BPU9 175 aa23.26■■□□□ 1.31
SSSCA1-207ENST00000533115 PEF1Q9UBV8 284 aaKnown RBP23.26■■□□□ 1.31
SSSCA1-207ENST00000533115 ADAM30Q9UKF2 790 aa23.26■■□□□ 1.31
SSSCA1-207ENST00000533115 LSM4Q9Y4Z0 139 aaKnown RBP23.26■■□□□ 1.31
SSSCA1-207ENST00000533115 DNAH9Q9NYC9 4486 aa23.26■■□□□ 1.31
SSSCA1-207ENST00000533115 TEX22C9J3V5 150 aa23.25■■□□□ 1.31
SSSCA1-207ENST00000533115 HPRT1P00492 218 aa23.25■■□□□ 1.31
SSSCA1-207ENST00000533115 PRH1P02810 166 aa23.25■■□□□ 1.31
SSSCA1-207ENST00000533115 HLA-DMAP28067 261 aa23.25■■□□□ 1.31
SSSCA1-207ENST00000533115 HRH1P35367 487 aa23.25■■□□□ 1.31
SSSCA1-207ENST00000533115 CD69Q07108 199 aa23.25■■□□□ 1.31
SSSCA1-207ENST00000533115 AADACL3Q5VUY0 350 aa23.25■■□□□ 1.31
SSSCA1-207ENST00000533115 SLC25A42Q86VD7 318 aa23.25■■□□□ 1.31
SSSCA1-207ENST00000533115 OR51H1Q8NH63 302 aa23.25■■□□□ 1.31
SSSCA1-207ENST00000533115 AP3S1Q92572 193 aa23.25■■□□□ 1.31
SSSCA1-207ENST00000533115 BET1LQ9NYM9 111 aa23.25■■□□□ 1.31
SSSCA1-207ENST00000533115 COL7A1Q02388 2944 aa23.24■■□□□ 1.31
SSSCA1-207ENST00000533115 TRBV9A0A0B4J1U6 114 aa23.24■■□□□ 1.31
SSSCA1-207ENST00000533115 HMX3A6NHT5 357 aa23.24■■□□□ 1.31
SSSCA1-207ENST00000533115 FAM223BA6NKX1 122 aa23.24■■□□□ 1.31
SSSCA1-207ENST00000533115 IL6RP08887 468 aaPredicted RBP23.24■■□□□ 1.31
SSSCA1-207ENST00000533115 ZNF182P17025 639 aaPredicted RBP23.24■■□□□ 1.31
SSSCA1-207ENST00000533115 TAS2R31P59538 309 aa23.24■■□□□ 1.31
SSSCA1-207ENST00000533115 RHOGP84095 191 aa23.24■■□□□ 1.31
SSSCA1-207ENST00000533115 ZNF45Q02386 682 aa23.24■■□□□ 1.31
SSSCA1-207ENST00000533115 OR4A47Q6IF82 309 aa23.24■■□□□ 1.31
SSSCA1-207ENST00000533115 FAM223AQ8IWN6 122 aa23.24■■□□□ 1.31
SSSCA1-207ENST00000533115 OR6F1Q8NGZ6 308 aa23.24■■□□□ 1.31
SSSCA1-207ENST00000533115 OR4A5Q8NH83 315 aa23.24■■□□□ 1.31
SSSCA1-207ENST00000533115 CD300LFQ8TDQ1 290 aa23.24■■□□□ 1.31
SSSCA1-207ENST00000533115 OR4C12Q96R67 309 aa23.24■■□□□ 1.31
SSSCA1-207ENST00000533115 AKIP1Q9NQ31 210 aa23.24■■□□□ 1.31
SSSCA1-207ENST00000533115 E7EUB6 86 aa23.23■■□□□ 1.31
SSSCA1-207ENST00000533115 LY86O95711 162 aa23.23■■□□□ 1.31
SSSCA1-207ENST00000533115 ALDH3B2P48448 385 aa23.23■■□□□ 1.31
SSSCA1-207ENST00000533115 RPL8P62917 257 aaKnown RBP23.23■■□□□ 1.31
SSSCA1-207ENST00000533115 GPR141Q7Z602 305 aa23.23■■□□□ 1.31
SSSCA1-207ENST00000533115 FYTTD1Q96QD9 318 aaKnown RBP23.23■■□□□ 1.31
SSSCA1-207ENST00000533115 ELOVL1Q9BW60 279 aa23.23■■□□□ 1.31
SSSCA1-207ENST00000533115 FAM25AB3EWG3 89 aa23.22■■□□□ 1.31
SSSCA1-207ENST00000533115 FAM25CB3EWG5 89 aa23.22■■□□□ 1.31
SSSCA1-207ENST00000533115 FAM25GB3EWG6 89 aa23.22■■□□□ 1.31
SSSCA1-207ENST00000533115 ZNF735P0CB33 412 aa23.22■■□□□ 1.31
SSSCA1-207ENST00000533115 NQO2P16083 231 aa23.22■■□□□ 1.31
SSSCA1-207ENST00000533115 KLF5Q13887 457 aaPredicted RBP23.22■■□□□ 1.31
SSSCA1-207ENST00000533115 OR6Q1Q8NGQ2 317 aa23.22■■□□□ 1.31
SSSCA1-207ENST00000533115 FXYD6Q9H0Q3 95 aa23.22■■□□□ 1.31
SSSCA1-207ENST00000533115 HRASLSQ9HDD0 168 aa23.22■■□□□ 1.31
SSSCA1-207ENST00000533115 SLC2A9Q9NRM0 540 aa23.22■■□□□ 1.31
SSSCA1-207ENST00000533115 ZNF257Q9Y2Q1 563 aa23.22■■□□□ 1.31
SSSCA1-207ENST00000533115 SORL1Q92673 2214 aa23.22■■□□□ 1.31
SSSCA1-207ENST00000533115 A0A1B0GW64 132 aa23.21■■□□□ 1.31
SSSCA1-207ENST00000533115 TRBV12-3P01733 135 aa23.21■■□□□ 1.31
SSSCA1-207ENST00000533115 HLA-GP17693 338 aa23.21■■□□□ 1.31
SSSCA1-207ENST00000533115 RCVRNP35243 200 aa23.21■■□□□ 1.31
SSSCA1-207ENST00000533115 ATP5G2Q06055 141 aa23.21■■□□□ 1.31
SSSCA1-207ENST00000533115 POU2AF1Q16633 256 aa23.21■■□□□ 1.31
SSSCA1-207ENST00000533115 PLEKHA2Q9HB19 425 aa23.21■■□□□ 1.31
SSSCA1-207ENST00000533115 DPPA5A6NC42 116 aa23.2■■□□□ 1.3
SSSCA1-207ENST00000533115 NPIPB5A8MRT5 1133 aa23.2■■□□□ 1.3
SSSCA1-207ENST00000533115 PGLYRP1O75594 196 aaPredicted RBP23.2■■□□□ 1.3
SSSCA1-207ENST00000533115 RLN1P04808 185 aa23.2■■□□□ 1.3
SSSCA1-207ENST00000533115 SPNP16150 400 aa23.2■■□□□ 1.3
SSSCA1-207ENST00000533115 NECAP1Q8NC96 275 aa23.2■■□□□ 1.3
SSSCA1-207ENST00000533115 S1PR2O95136 353 aa23.19■■□□□ 1.3
SSSCA1-207ENST00000533115 MYOD1P15172 320 aa23.19■■□□□ 1.3
SSSCA1-207ENST00000533115 TSPAN5P62079 268 aa23.19■■□□□ 1.3
SSSCA1-207ENST00000533115 EXOSC2Q13868 293 aaKnown RBP23.19■■□□□ 1.3
SSSCA1-207ENST00000533115 CMTM1Q8IZ96 169 aa23.19■■□□□ 1.3
SSSCA1-207ENST00000533115 COMMD9Q9P000 198 aa23.19■■□□□ 1.3
SSSCA1-207ENST00000533115 GPR31O00270 319 aa23.18■■□□□ 1.3
SSSCA1-207ENST00000533115 UPK2O00526 184 aa23.18■■□□□ 1.3
SSSCA1-207ENST00000533115 DMBX1Q8NFW5 382 aa23.18■■□□□ 1.3
SSSCA1-207ENST00000533115 TMEM140Q9NV12 185 aa23.18■■□□□ 1.3
SSSCA1-207ENST00000533115 OR2J3O76001 311 aa23.17■■□□□ 1.3
SSSCA1-207ENST00000533115 CRYGCP07315 174 aa23.17■■□□□ 1.3
SSSCA1-207ENST00000533115 AREGP15514 252 aa23.17■■□□□ 1.3
SSSCA1-207ENST00000533115 F2RP25116 425 aa23.17■■□□□ 1.3
SSSCA1-207ENST00000533115 SYNJ2BPP57105 145 aa23.17■■□□□ 1.3
SSSCA1-207ENST00000533115 RPEL1Q2QD12 228 aa23.17■■□□□ 1.3
SSSCA1-207ENST00000533115 C19orf35Q6ZS72 473 aa23.17■■□□□ 1.3
SSSCA1-207ENST00000533115 OR9G4Q8NGQ1 327 aa23.17■■□□□ 1.3
SSSCA1-207ENST00000533115 EXTL2Q9UBQ6 330 aa23.17■■□□□ 1.3
SSSCA1-207ENST00000533115 TRAV3A0A0B4J244 114 aa23.16■■□□□ 1.3
SSSCA1-207ENST00000533115 CGB1A6NKQ9 187 aa23.16■■□□□ 1.3
SSSCA1-207ENST00000533115 PSMB6P28072 239 aa23.16■■□□□ 1.3
SSSCA1-207ENST00000533115 C15orf32Q32M92 178 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms