RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 FAM169BQ8N8A8 192 aa7.47□□□□□ -1.21
CTNND1-232ENST00000532649 ADAD2Q8NCV1 583 aaKnown RBP7.47□□□□□ -1.21
CTNND1-232ENST00000532649 TMEM45BQ96B21 275 aa7.47□□□□□ -1.21
CTNND1-232ENST00000532649 FNDC1Q4ZHG4 1894 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-232ENST00000532649 TRBV7-9A0A0J9YWB2 115 aa7.46□□□□□ -1.21
CTNND1-232ENST00000532649 VSIG10L2P0DP72 767 aa7.46□□□□□ -1.21
CTNND1-232ENST00000532649 ZNF708P17019 499 aa7.46□□□□□ -1.21
CTNND1-232ENST00000532649 CFHR1Q03591 330 aa7.46□□□□□ -1.21
CTNND1-232ENST00000532649 MRPL24Q96A35 216 aaKnown RBP7.46□□□□□ -1.21
CTNND1-232ENST00000532649 GP6Q9HCN6 339 aa7.46□□□□□ -1.21
CTNND1-232ENST00000532649 ARID1AO14497 2285 aa7.46□□□□□ -1.21
CTNND1-232ENST00000532649 CD69Q07108 199 aa7.46□□□□□ -1.21
CTNND1-232ENST00000532649 TIMM23BQ5SRD1 257 aa7.46□□□□□ -1.21
CTNND1-232ENST00000532649 LINC01587Q99440 93 aa7.46□□□□□ -1.21
CTNND1-232ENST00000532649 IDI2-AS1Q9NZ38 188 aa7.46□□□□□ -1.21
CTNND1-232ENST00000532649 PAM16Q9Y3D7 125 aa7.46□□□□□ -1.21
CTNND1-232ENST00000532649 TRGV2A0A075B6R0 118 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 LINC00862A6NCI5 91 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 PGPA6NDG6 321 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 TBX6O95947 436 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-232ENST00000532649 CFDP00746 253 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-232ENST00000532649 GTSCR1Q86UQ5 136 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 RGP1Q92546 391 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-232ENST00000532649 C9JCJ5 164 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 HCP5Q6MZN7 132 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 KIR3DL3Q8N743 410 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 VN1R17PQ8TDU5 208 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 PKIBQ9C010 78 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 JKAMPQ9P055 326 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 GVINP1Q7Z2Y8 2422 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 LOC102723996A0A087X1L8 192 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 IGHV1-69-2A0A0G2JMI3 117 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 CTXND1A0A1B0GTU2 59 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 NPIPB13A6NJU9 1138 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 FAM74A7A6NL05 159 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 NPIPB4C9JG80 1138 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 HKR1P10072 659 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 ZNF324BQ6AW86 544 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-232ENST00000532649 LYZL2Q7Z4W2 148 aa7.46□□□□□ -1.22
CTNND1-232ENST00000532649 SPTBN2O15020 2390 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 VWA8A3KMH1 1905 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 NKX2-6A6NCS4 301 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 NPIPB9F8W1W9 429 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 SMIM6P0DI80 62 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 MEF2CQ06413 473 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-232ENST00000532649 PGLYRP4Q96LB8 373 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 KLK15Q9H2R5 256 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 TOMM7Q9P0U1 55 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 C7orf71A4D174 169 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 B9A039 149 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 TMEM50BP56557 158 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 LINC01590Q5TEZ4 76 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 NRIP2Q9BQI9 281 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 G6PC2Q9NQR9 355 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 PSCAO43653 123 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 TRGV3P03979 118 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 PCP4P48539 62 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 ZNF880Q6PDB4 577 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 NPVFQ9HCQ7 196 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 IL36RNQ9UBH0 155 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 KCNK7Q9Y2U2 307 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 SIP14410 1827 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 COL4A6Q14031 1691 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 LY6DQ14210 128 aa7.45□□□□□ -1.22
CTNND1-232ENST00000532649 ZNF430Q9H8G1 570 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-232ENST00000532649 SCTP09683 121 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 APOBEC3AP31941 199 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-232ENST00000532649 VDAC2P45880 294 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-232ENST00000532649 EWSR1Q01844 656 aaKnown RBP eCLIP7.44□□□□□ -1.22
CTNND1-232ENST00000532649 STHQ8IWL8 128 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 PXMP4Q9Y6I8 212 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 NPIPB11E5RHQ5 1161 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 AMY1AP04745 511 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 SELENOTP62341 195 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 RPL8P62917 257 aaKnown RBP7.44□□□□□ -1.22
CTNND1-232ENST00000532649 ZNF645Q8N7E2 425 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 MARVELD3Q96A59 401 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 WDYHV1Q96HA8 205 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 TLNRD1Q9H1K6 362 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 SIRT7Q9NRC8 400 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 CECR9P0C854 216 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 LINC00869P0C866 280 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 IBA57Q5T440 356 aaKnown RBP7.44□□□□□ -1.22
CTNND1-232ENST00000532649 DLL3Q9NYJ7 618 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 ODAMA1E959 279 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 ARF6P62330 175 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 Q5PR19 223 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 C9orf106Q8NAJ2 232 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 ARHGEF17Q96PE2 2063 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-232ENST00000532649 DMRTA2Q96SC8 542 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 MESP1Q9BRJ9 268 aa7.44□□□□□ -1.22
CTNND1-232ENST00000532649 LIPFP07098 398 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 ASIPP42127 132 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 NPBWR2P48146 333 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 MFAP2P55001 183 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 UBE2V2Q15819 145 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 ZNF79Q15937 498 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 DEFB121Q5J5C9 76 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 TCF24Q7RTU0 167 aa7.43□□□□□ -1.22
CTNND1-232ENST00000532649 CALYQ9NYX4 217 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms