RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-231ENST00000532463 MARCH11A6NNE9 402 aa6.97□□□□□ -1.29
CTNND1-231ENST00000532463 TNFSF13O75888 250 aa6.97□□□□□ -1.29
CTNND1-231ENST00000532463 ZNF79Q15937 498 aa6.97□□□□□ -1.29
CTNND1-231ENST00000532463 CHCHD1Q96BP2 118 aaKnown RBP6.97□□□□□ -1.29
CTNND1-231ENST00000532463 SEPSECSQ9HD40 501 aaKnown RBP6.97□□□□□ -1.29
CTNND1-231ENST00000532463 ST6GALNAC2Q9UJ37 374 aa6.97□□□□□ -1.29
CTNND1-231ENST00000532463 DNAJC13O75165 2243 aa6.96□□□□□ -1.29
CTNND1-231ENST00000532463 NPIPB11E5RHQ5 1161 aa6.96□□□□□ -1.29
CTNND1-231ENST00000532463 CCL1P22362 96 aa6.96□□□□□ -1.29
CTNND1-231ENST00000532463 GFERP55789 205 aa6.96□□□□□ -1.29
CTNND1-231ENST00000532463 SELENOHQ8IZQ5 122 aaKnown RBP6.96□□□□□ -1.29
CTNND1-231ENST00000532463 TEX45Q8NA69 505 aa6.96□□□□□ -1.29
CTNND1-231ENST00000532463 ZNF385AQ96PM9 386 aaKnown RBP6.96□□□□□ -1.29
CTNND1-231ENST00000532463 PGLYRP1O75594 196 aaPredicted RBP6.96□□□□□ -1.29
CTNND1-231ENST00000532463 PF4P02776 101 aa6.96□□□□□ -1.29
CTNND1-231ENST00000532463 GFI1BQ5VTD9 330 aa6.96□□□□□ -1.29
CTNND1-231ENST00000532463 SERGEFQ9UGK8 458 aa6.96□□□□□ -1.29
CTNND1-231ENST00000532463 IGHV3-72A0A0B4J1Y9 119 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 CLPSL1A2RUU4 121 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 H0Y8X5 98 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 MPV17P39210 176 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 ZNRF1Q8ND25 227 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 PLPPR1Q8TBJ4 325 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 APOBEC4Q8WW27 367 aaKnown RBP6.96□□□□□ -1.3
CTNND1-231ENST00000532463 LINC00615Q96LM1 132 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-231ENST00000532463 ZG16O60844 167 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 TRA2AQ13595 282 aaKnown RBP eCLIP6.96□□□□□ -1.3
CTNND1-231ENST00000532463 CACNG8Q8WXS5 425 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 NPIPB3Q92617 1050 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 IFI27L1Q96BM0 104 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 LINC01587Q99440 93 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 FBXL15Q9H469 300 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 TCF19Q9Y242 345 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 ARID1AO14497 2285 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 PRRC2BQ5JSZ5 2229 aaKnown RBP6.96□□□□□ -1.3
CTNND1-231ENST00000532463 GAGE12BA1L429 117 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 FAM90A10PA6NDY2 464 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 FAM90A18PA6NE21 464 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 FAM90A16PA6NEW6 464 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 FAM90A20PA6NIJ5 464 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 FAM90A8PA6NJQ4 464 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 FAM90A7PA6NKC0 464 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 ADARB2-AS1A8MUL3 147 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 FAM90A22PA8MWA6 464 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 FAM90A12PA8MX19 464 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 FAM90A5PA8MXJ8 464 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 FAM90A23PA8MXZ1 464 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 KLK10O43240 276 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 FAM90A15PP0C7V4 464 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 FAM90A13PP0C7W8 464 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 FAM90A14PP0C7W9 464 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 FAM90A24PP0C7X0 464 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 EGR1P18146 543 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 VEGFBP49765 207 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 ISXQ2M1V0 245 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 TMEM30BQ3MIR4 351 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 CD300EQ496F6 205 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-231ENST00000532463 ADAMTSL5Q6ZMM2 481 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 DRAM1Q8N682 238 aa6.96□□□□□ -1.3
CTNND1-231ENST00000532463 HTN3P15516 51 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 LHX2P50458 406 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 CD69Q07108 199 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 CCL26Q9Y258 94 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 PTCRAQ6ISU1 281 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-231ENST00000532463 LOC105371267A0A1B0GV96 52 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 HIGD1CA8MV81 97 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 FGF12P61328 243 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 EFNB1P98172 346 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 TGIF1Q15583 401 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 UTF1Q5T230 341 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 ASCL2Q99929 193 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 CHD2O14647 1828 aaKnown RBP6.95□□□□□ -1.3
CTNND1-231ENST00000532463 IFNL4K9M1U5 179 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 LEPROTO15243 131 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 ZIC3O60481 467 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 NOVP48745 357 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 ATP6V0BQ99437 205 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 PIK3C2AO00443 1686 aa6.95□□□□□ -1.3
CTNND1-231ENST00000532463 IL6RP08887 468 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-231ENST00000532463 CLEC2AQ6UVW9 174 aa6.94□□□□□ -1.3
CTNND1-231ENST00000532463 MRPL55Q7Z7F7 128 aaKnown RBP6.94□□□□□ -1.3
CTNND1-231ENST00000532463 OR5P3Q8WZ94 311 aa6.94□□□□□ -1.3
CTNND1-231ENST00000532463 RASL10AQ92737 203 aa6.94□□□□□ -1.3
CTNND1-231ENST00000532463 CALYQ9NYX4 217 aa6.94□□□□□ -1.3
CTNND1-231ENST00000532463 SPINK2P20155 84 aa6.94□□□□□ -1.3
CTNND1-231ENST00000532463 MAGEA5P43359 124 aa6.94□□□□□ -1.3
CTNND1-231ENST00000532463 IL11RAQ14626 422 aa6.94□□□□□ -1.3
CTNND1-231ENST00000532463 ANKRD29Q8N6D5 301 aa6.94□□□□□ -1.3
CTNND1-231ENST00000532463 RCC1LQ96I51 464 aaKnown RBP6.94□□□□□ -1.3
CTNND1-231ENST00000532463 NAA38Q9BRA0 125 aaKnown RBP6.94□□□□□ -1.3
CTNND1-231ENST00000532463 CHAC1Q9BUX1 264 aa6.94□□□□□ -1.3
CTNND1-231ENST00000532463 LOC105371242A0A075B767 164 aa6.94□□□□□ -1.3
CTNND1-231ENST00000532463 PPIAL4CA0A0B4J2A2 164 aa6.94□□□□□ -1.3
CTNND1-231ENST00000532463 MUC21A0A0G2JKD1 596 aa6.94□□□□□ -1.3
CTNND1-231ENST00000532463 MUC21A0A140T8X8 626 aa6.94□□□□□ -1.3
CTNND1-231ENST00000532463 TMEM8BA6NDV4 472 aa6.94□□□□□ -1.3
CTNND1-231ENST00000532463 LIPT2A6NK58 231 aa6.94□□□□□ -1.3
CTNND1-231ENST00000532463 C9JAW5 83 aa6.94□□□□□ -1.3
CTNND1-231ENST00000532463 CDC42EP2O14613 210 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms