RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 GTF2H5Q6ZYL4 71 aa9.55□□□□□ -0.88
PTPRK-221ENST00000532331 MBD3L2Q8NHZ7 208 aaPredicted RBP9.55□□□□□ -0.88
PTPRK-221ENST00000532331 MARVELD3Q96A59 401 aa9.55□□□□□ -0.88
PTPRK-221ENST00000532331 SLC25A33Q9BSK2 321 aa9.55□□□□□ -0.88
PTPRK-221ENST00000532331 REPIN1Q9BWE0 567 aaKnown RBP9.55□□□□□ -0.88
PTPRK-221ENST00000532331 FUT9Q9Y231 359 aa9.55□□□□□ -0.88
PTPRK-221ENST00000532331 DDB2Q92466 427 aa9.55□□□□□ -0.88
PTPRK-221ENST00000532331 TAF15Q92804 592 aaKnown RBP eCLIP9.55□□□□□ -0.888e-7■□□□□ 10.9
PTPRK-221ENST00000532331 LSM10Q969L4 123 aaKnown RBP9.55□□□□□ -0.88
PTPRK-221ENST00000532331 VWA8A3KMH1 1905 aa9.55□□□□□ -0.88
PTPRK-221ENST00000532331 TANC1Q9C0D5 1861 aa9.55□□□□□ -0.88
PTPRK-221ENST00000532331 IGKV3D-15A0A087WSY6 115 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 CXCL2P19875 107 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 KLK2P20151 261 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 TNFRSF9Q07011 255 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 ZNF672Q499Z4 452 aaPredicted RBP9.54□□□□□ -0.88
PTPRK-221ENST00000532331 CBLN2Q8IUK8 224 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 OR5AU1Q8NGC0 362 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 AURKAIP1Q9NWT8 199 aaPredicted RBP9.54□□□□□ -0.88
PTPRK-221ENST00000532331 TICRRQ7Z2Z1 1910 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 ICE1Q9Y2F5 2266 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 TMEM189A5PLL7 270 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 CFDP00746 253 aaPredicted RBP9.54□□□□□ -0.88
PTPRK-221ENST00000532331 IGHG3P01860 377 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 UCP3P55916 312 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 ZNF738Q8NE65 137 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 CHAC2Q8WUX2 184 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 CRIM1Q9NZV1 1036 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 B4DSR2 109 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 PQLC2Q6ZP29 291 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 MYOZ3Q8TDC0 251 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 LINC00312Q9Y6C7 94 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 TMEM56-RWDD3S4R434 201 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 A8MWL6 223 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 S1PR2O95136 353 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 SMAGPQ0VAQ4 97 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 LINC00114Q6XXX2 140 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 GGNQ86UU5 652 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 HSPB8Q9UJY1 196 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 M0QZK8 103 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 LYRM7Q5U5X0 104 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 ZNF385CQ66K41 422 aaPredicted RBP9.54□□□□□ -0.88
PTPRK-221ENST00000532331 C5orf66Q9H5L9 145 aa9.54□□□□□ -0.88
PTPRK-221ENST00000532331 HKR1P10072 659 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 SLC25A16P16260 332 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 SLC25A28Q96A46 364 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 VPS25Q9BRG1 176 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 KBTBD11O94819 623 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 AREGP15514 252 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 MIC13Q5XKP0 118 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 ZNF818PQ6ZRF7 136 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 ELF5Q9UKW6 265 aaPredicted RBP9.53□□□□□ -0.88
PTPRK-221ENST00000532331 TRAV34A0A0B4J273 112 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 LY6G6EA0A0G2JKS1 128 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 FCGR2BP31994 310 aaPredicted RBP9.53□□□□□ -0.88
PTPRK-221ENST00000532331 OR4B1Q8NGF8 309 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 U3KQA8 63 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 CEP250Q9BV73 2442 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 NYNRINQ9P2P1 1898 aaKnown RBP9.53□□□□□ -0.88
PTPRK-221ENST00000532331 TRAV40A0A0B4J280 105 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 PLAUP00749 431 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 ASPHD2Q6ICH7 369 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 RTN4RQ9BZR6 473 aa9.53□□□□□ -0.88
PTPRK-221ENST00000532331 KBTBD11-OT1A0A1B0GTJ5 212 aa9.52□□□□□ -0.88
PTPRK-221ENST00000532331 CD74P04233 296 aa9.52□□□□□ -0.88
PTPRK-221ENST00000532331 SNRPCP09234 159 aaKnown RBP9.52□□□□□ -0.88
PTPRK-221ENST00000532331 TWIST1Q15672 202 aa9.52□□□□□ -0.88
PTPRK-221ENST00000532331 SCGB1D4Q6XE38 83 aa9.52□□□□□ -0.88
PTPRK-221ENST00000532331 CYB561D1Q8N8Q1 229 aa9.52□□□□□ -0.88
PTPRK-221ENST00000532331 GPHA2Q96T91 129 aa9.52□□□□□ -0.88
PTPRK-221ENST00000532331 DNAJC4Q9NNZ3 241 aa9.52□□□□□ -0.88
PTPRK-221ENST00000532331 AP5S1Q9NUS5 200 aa9.52□□□□□ -0.88
PTPRK-221ENST00000532331 TCF19Q9Y242 345 aa9.52□□□□□ -0.88
PTPRK-221ENST00000532331 GPR179Q6PRD1 2367 aa9.52□□□□□ -0.88
PTPRK-221ENST00000532331 PGPA6NDG6 321 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 IGFL3Q6UXB1 125 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 DRAM1Q8N682 238 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 CCDC88CQ9P219 2028 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 NDUFB4O95168 129 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 MOSP00540 346 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 NPPCP23582 126 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 ZNF146Q15072 292 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 PPP1R27Q86WC6 154 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 SYT8Q8NBV8 401 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 IGHV1-46P01743 117 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 REG1AP05451 166 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 ZNF250P15622 560 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 PSG9Q00887 426 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 NCMAPQ5T1S8 102 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 SGMS2Q8NHU3 365 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 C8orf46Q8TAG6 207 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 AQP10Q96PS8 301 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 DCAF16Q9NXF7 216 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 MFAP2P55001 183 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 TMEM187Q14656 261 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 HSPB7Q9UBY9 170 aa9.52□□□□□ -0.89
PTPRK-221ENST00000532331 PLA2G5P39877 138 aa9.51□□□□□ -0.89
PTPRK-221ENST00000532331 RPS11P62280 158 aaKnown RBP eCLIP9.51□□□□□ -0.89
PTPRK-221ENST00000532331 SNRPD3P62318 126 aaKnown RBP9.51□□□□□ -0.89
PTPRK-221ENST00000532331 SMIM8Q96KF7 97 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms