RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 TUBA4BQ9H853 241 aa11.96□□□□□ -0.49
CPSF1-205ENST00000531042 TAS2R8Q9NYW2 309 aa11.96□□□□□ -0.49
CPSF1-205ENST00000531042 DMRT1Q9Y5R6 373 aa11.96□□□□□ -0.49
CPSF1-205ENST00000531042 NPIPB5A8MRT5 1133 aa11.95□□□□□ -0.5
CPSF1-205ENST00000531042 MAS1LP35410 378 aa11.95□□□□□ -0.5
CPSF1-205ENST00000531042 RPL27AP46776 148 aaKnown RBP11.95□□□□□ -0.5
CPSF1-205ENST00000531042 SCAND1P57086 179 aa11.95□□□□□ -0.5
CPSF1-205ENST00000531042 MXD1Q05195 221 aa11.95□□□□□ -0.5
CPSF1-205ENST00000531042 FAM209BQ5JX69 171 aa11.95□□□□□ -0.5
CPSF1-205ENST00000531042 ZNF66Q6ZN08 573 aa11.95□□□□□ -0.5
CPSF1-205ENST00000531042 C19orf35Q6ZS72 473 aa11.95□□□□□ -0.5
CPSF1-205ENST00000531042 OR5H6Q8NGV6 325 aa11.95□□□□□ -0.5
CPSF1-205ENST00000531042 ISOC1Q96CN7 298 aa11.95□□□□□ -0.5
CPSF1-205ENST00000531042 GPHA2Q96T91 129 aa11.95□□□□□ -0.5
CPSF1-205ENST00000531042 SACSQ9NZJ4 4579 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 TRAV18A0A075B6X5 111 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 A0A1B0GW64 132 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 DPPA5A6NC42 116 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 PPP5D1E7EU14 171 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 HRASP01112 189 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 CLEC2LP0C7M8 214 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 ZNF735P0CB33 412 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 CD300EQ496F6 205 aaPredicted RBP11.94□□□□□ -0.5
CPSF1-205ENST00000531042 ZFAND6Q6FIF0 208 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 GVQW1Q8N7I0 195 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 BEST4Q8NFU0 473 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 SLC25A38Q96DW6 304 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 FYTTD1Q96QD9 318 aaKnown RBP11.94□□□□□ -0.5
CPSF1-205ENST00000531042 Q9H521 79 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 RNF167Q9H6Y7 350 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 SLC2A9Q9NRM0 540 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 FBXL7Q9UJT9 491 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 ETV7Q9Y603 341 aa11.94□□□□□ -0.5
CPSF1-205ENST00000531042 ZNF785A8K8V0 405 aa11.93□□□□□ -0.5
CPSF1-205ENST00000531042 GGCTO75223 188 aaKnown RBP11.93□□□□□ -0.5
CPSF1-205ENST00000531042 CRYGCP07315 174 aa11.93□□□□□ -0.5
CPSF1-205ENST00000531042 PTHLHP12272 177 aa11.93□□□□□ -0.5
CPSF1-205ENST00000531042 FCGR2CP31995 323 aa11.93□□□□□ -0.5
CPSF1-205ENST00000531042 KIR2DS2P43631 304 aa11.93□□□□□ -0.5
CPSF1-205ENST00000531042 ARPC4P59998 168 aa11.93□□□□□ -0.5
CPSF1-205ENST00000531042 MSMO1Q15800 293 aa11.93□□□□□ -0.5
CPSF1-205ENST00000531042 DEFB114Q30KQ6 69 aa11.93□□□□□ -0.5
CPSF1-205ENST00000531042 ZNF773Q6PK81 442 aa11.93□□□□□ -0.5
CPSF1-205ENST00000531042 LINC00322Q6ZN03 302 aaPredicted RBP11.93□□□□□ -0.5
CPSF1-205ENST00000531042 SSX9Q7RTT3 188 aa11.93□□□□□ -0.5
CPSF1-205ENST00000531042 HOGA1Q86XE5 327 aa11.93□□□□□ -0.5
CPSF1-205ENST00000531042 LAX1Q8IWV1 398 aa11.93□□□□□ -0.5
CPSF1-205ENST00000531042 SECTM1Q8WVN6 248 aa11.93□□□□□ -0.5
CPSF1-205ENST00000531042 FANCD2OSQ96PS1 177 aa11.93□□□□□ -0.5
CPSF1-205ENST00000531042 CCL28Q9NRJ3 127 aa11.93□□□□□ -0.5
CPSF1-205ENST00000531042 A0A0A6YYH2 397 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 A6NJ64 397 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 C2orf70A6NJV1 201 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 LGALS9O00182 355 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 TNFSF12O43508 249 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 OR2C1O95371 312 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 HLA-AP01891 365 aaKnown RBP11.92□□□□□ -0.5
CPSF1-205ENST00000531042 FOLR2P14207 255 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 AREGP15514 252 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 PSMB6P28072 239 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 CD81P60033 236 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 RPL8P62917 257 aaKnown RBP11.92□□□□□ -0.5
CPSF1-205ENST00000531042 KLK9Q2XQG4 91 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 IDNKQ5T6J7 187 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 OR13F1Q8NGS4 319 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 DYNLRB2Q8TF09 96 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 NEURL2Q9BR09 285 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 PLEKHA3Q9HB20 300 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 GAR1Q9NY12 217 aaKnown RBP11.92□□□□□ -0.5
CPSF1-205ENST00000531042 KLK9Q9UKQ9 250 aa11.92□□□□□ -0.5
CPSF1-205ENST00000531042 LOC100506127A0A0U1RQW1 187 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 LCE6AA0A183 80 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 NDUFB8O95169 186 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 DHFRP00374 187 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 PPYP01298 95 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 IGHV3-23P01764 117 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 IFNA6P05013 189 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 CD7P09564 240 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 MYOD1P15172 320 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 CTRB1P17538 263 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 EDN2P20800 178 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 CTRB2Q6GPI1 263 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 GPHB5Q86YW7 130 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 SPAG16Q8N0X2 631 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 ZBTB34Q8NCN2 500 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 OR4A5Q8NH83 315 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 CCDC140Q96MF4 163 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 AIFM2Q9BRQ8 373 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 AUNIPQ9H7T9 357 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 ZC4H2Q9NQZ6 224 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 SLC2A8Q9NY64 477 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 BET1LQ9NYM9 111 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 TECRQ9NZ01 308 aaKnown RBP11.91□□□□□ -0.5
CPSF1-205ENST00000531042 CEPT1Q9Y6K0 416 aa11.91□□□□□ -0.5
CPSF1-205ENST00000531042 CGB1A6NKQ9 187 aa11.9□□□□□ -0.5
CPSF1-205ENST00000531042 RBFOX2O43251 390 aaKnown RBP eCLIP11.9□□□□□ -0.51e-7■■■■□ 24.7
CPSF1-205ENST00000531042 TPPPO94811 219 aa11.9□□□□□ -0.5
CPSF1-205ENST00000531042 HIST1H1BP16401 226 aaKnown RBP11.9□□□□□ -0.5
CPSF1-205ENST00000531042 HLA-GP17693 338 aa11.9□□□□□ -0.5
CPSF1-205ENST00000531042 ARL3P36405 182 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms