RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 KCNJ8Q15842 424 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 PPP1R2P3Q6NXS1 205 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 SMARCD3Q6STE5 483 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 TMPPEQ6ZT21 453 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 TBC1D19Q8N5T2 526 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 BORCS7Q96B45 105 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 ERMAPQ96PL5 475 aaPredicted RBP3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 TTTY13Q9BZ97 58 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 MMACHCQ9Y4U1 282 aa3.26□□□□□ -1.89
CAPRIN1-208ENST00000530008 CHD5Q8TDI0 1954 aa3.25□□□□□ -1.89
CAPRIN1-208ENST00000530008 TMEM269A0A1B0GVZ9 245 aa3.25□□□□□ -1.89
CAPRIN1-208ENST00000530008 TMEM235A6NFC5 223 aa3.25□□□□□ -1.89
CAPRIN1-208ENST00000530008 FAAHO00519 579 aa3.25□□□□□ -1.89
CAPRIN1-208ENST00000530008 SSX8Q7RTT4 187 aa3.25□□□□□ -1.89
CAPRIN1-208ENST00000530008 ANKRD29Q8N6D5 301 aa3.25□□□□□ -1.89
CAPRIN1-208ENST00000530008 OR4X1Q8NH49 305 aa3.25□□□□□ -1.89
CAPRIN1-208ENST00000530008 SMCR5Q8TEV8 140 aa3.25□□□□□ -1.89
CAPRIN1-208ENST00000530008 SIGMAR1Q99720 223 aa3.25□□□□□ -1.89
CAPRIN1-208ENST00000530008 CMSS1Q9BQ75 279 aaKnown RBP3.25□□□□□ -1.89
CAPRIN1-208ENST00000530008 PRTFDC1Q9NRG1 225 aa3.25□□□□□ -1.89
CAPRIN1-208ENST00000530008 PAQR5Q9NXK6 330 aaPredicted RBP3.25□□□□□ -1.89
CAPRIN1-208ENST00000530008 IDI2-AS1Q9NZ38 188 aa3.25□□□□□ -1.89
CAPRIN1-208ENST00000530008 NCOA1Q15788 1441 aa3.25□□□□□ -1.89
CAPRIN1-208ENST00000530008 OTOFQ9HC10 1997 aa3.25□□□□□ -1.89
CAPRIN1-208ENST00000530008 SHANK3Q9BYB0 1731 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 PRR14LQ5THK1 2151 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 A0A0J9YX75 114 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 A0A0J9YY10 115 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 FAM236DA0A1B0GTK5 79 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 A0A1B0GX78 115 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 I3L521 148 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 NPYP01303 97 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 SRP19P09132 144 aaKnown RBP3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 CST2P09228 141 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 ZNF705DP0CH99 300 aaPredicted RBP3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 FAM236CP0DP71 79 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 FXYD7P58549 80 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 GLO1Q04760 184 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 TAF1AQ15573 450 aaPredicted RBP3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 IAH1Q2TAA2 248 aaPredicted RBP3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 OR8B12Q8NGG6 310 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 PHOSPHO2Q8TCD6 241 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 ZNF675Q8TD23 568 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 FGF13Q92913 245 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 NACADO15069 1562 aa3.24□□□□□ -1.89
CAPRIN1-208ENST00000530008 TRBV20OR9-2A0A075B6H5 130 aa3.23□□□□□ -1.89
CAPRIN1-208ENST00000530008 TRAV26-2A0A0B4J265 109 aa3.23□□□□□ -1.89
CAPRIN1-208ENST00000530008 A0A1W2PQD3 144 aa3.23□□□□□ -1.89
CAPRIN1-208ENST00000530008 E7EQL1 145 aa3.23□□□□□ -1.89
CAPRIN1-208ENST00000530008 TXNDC9O14530 226 aa3.23□□□□□ -1.89
CAPRIN1-208ENST00000530008 CD24P25063 80 aa3.23□□□□□ -1.89
CAPRIN1-208ENST00000530008 LIN52Q52LA3 116 aa3.23□□□□□ -1.89
CAPRIN1-208ENST00000530008 Q6ZS49 121 aa3.23□□□□□ -1.89
CAPRIN1-208ENST00000530008 SLC35F6Q8N357 371 aa3.23□□□□□ -1.89
CAPRIN1-208ENST00000530008 ZNF283Q8N7M2 679 aa3.23□□□□□ -1.89
CAPRIN1-208ENST00000530008 OR10X1Q8NGY0 326 aa3.23□□□□□ -1.89
CAPRIN1-208ENST00000530008 BTF3L4Q96K17 158 aa3.23□□□□□ -1.89
CAPRIN1-208ENST00000530008 CISHQ9NSE2 258 aa3.23□□□□□ -1.89
CAPRIN1-208ENST00000530008 ARL5AQ9Y689 179 aa3.23□□□□□ -1.89
CAPRIN1-208ENST00000530008 NUP160Q12769 1436 aa3.22□□□□□ -1.89
CAPRIN1-208ENST00000530008 ZNF878C9JN71 531 aa3.22□□□□□ -1.89
CAPRIN1-208ENST00000530008 SERPINA7P05543 415 aa3.22□□□□□ -1.89
CAPRIN1-208ENST00000530008 BLVRBP30043 206 aaPredicted RBP3.22□□□□□ -1.89
CAPRIN1-208ENST00000530008 S100A7P31151 101 aa3.22□□□□□ -1.89
CAPRIN1-208ENST00000530008 RPS20P60866 119 aaKnown RBP3.22□□□□□ -1.89
CAPRIN1-208ENST00000530008 TAF9Q16594 264 aa3.22□□□□□ -1.89
CAPRIN1-208ENST00000530008 HACD4Q5VWC8 232 aa3.22□□□□□ -1.89
CAPRIN1-208ENST00000530008 ZNF676Q8N7Q3 588 aa3.22□□□□□ -1.89
CAPRIN1-208ENST00000530008 OR4C16Q8NGL9 310 aa3.22□□□□□ -1.89
CAPRIN1-208ENST00000530008 CEP19Q96LK0 163 aa3.22□□□□□ -1.89
CAPRIN1-208ENST00000530008 TSPAN32Q96QS1 320 aa3.22□□□□□ -1.89
CAPRIN1-208ENST00000530008 C9orf16Q9BUW7 83 aa3.22□□□□□ -1.89
CAPRIN1-208ENST00000530008 WDR61Q9GZS3 305 aaKnown RBP3.22□□□□□ -1.89
CAPRIN1-208ENST00000530008 NMNAT1Q9HAN9 279 aaPredicted RBP3.22□□□□□ -1.89
CAPRIN1-208ENST00000530008 SHANK1Q9Y566 2161 aa3.22□□□□□ -1.89
CAPRIN1-208ENST00000530008 DICER1Q9UPY3 1922 aaKnown RBP3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 PIK3C2GO75747 1445 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 C11orf86A6NJI1 115 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 GNRH2O43555 120 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 SULT1B1O43704 296 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 OR7C1O76099 320 aaPredicted RBP3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 ZNF728P0DKX0 622 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 CSN1S1P47710 185 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 GABRA4P48169 554 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 DEFA1P59665 94 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 KRTAP10-8P60410 259 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 TMEM42Q69YG0 159 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 TCF24Q7RTU0 167 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 PXT1Q8NFP0 134 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 PHB2Q99623 299 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 TMEM147Q9BVK8 224 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 KIFC1Q9BW19 673 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 ZNF471Q9BX82 626 aaPredicted RBP3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 COMMD5Q9GZQ3 224 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 C14orf105Q9NVL8 296 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 RSL24D1Q9UHA3 163 aaKnown RBP3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 STOML2Q9UJZ1 356 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 FAM215AQ9Y5M1 114 aa3.21□□□□□ -1.9
CAPRIN1-208ENST00000530008 PCF11O94913 1555 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms