RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 SCGB1D4Q6XE38 83 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 LINC00173Q6ZV60 143 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 OOSP2Q86WS3 158 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 ZNF439Q8NDP4 499 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 ABHD3Q8WU67 409 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 AURKBQ96GD4 344 aaPredicted RBP3.94□□□□□ -1.78
PCF11-202ENST00000528336 DNAJC30Q96LL9 226 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 PPP1R2P1Q96PQ5 205 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 PFDN5Q99471 154 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 GNB1LQ9BYB4 327 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 HES4Q9HCC6 221 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 AIG1Q9NVV5 245 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 GLS2Q9UI32 602 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 SNX12Q9UMY4 172 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 DOCK4Q8N1I0 1966 aa3.94□□□□□ -1.78
PCF11-202ENST00000528336 MIA3Q5JRA6 1907 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 CHD5Q8TDI0 1954 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 IGKV1-8A0A0C4DH67 115 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 WI2-2373I1.2A0A1W2PRP0 233 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 F8W036 122 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 LYPLA1O75608 230 aaPredicted RBP3.93□□□□□ -1.78
PCF11-202ENST00000528336 OR4A8P0C604 315 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 CECR9P0C854 216 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 GABRR1P24046 479 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 RBMXP38159 391 aaKnown RBP3.93□□□□□ -1.78
PCF11-202ENST00000528336 PSMD8P48556 350 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 NCBP2P52298 156 aaKnown RBP eCLIP3.93□□□□□ -1.78
PCF11-202ENST00000528336 DAD1P61803 113 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 SMIM21Q3B7S5 101 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 C6orf99Q4VX62 202 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 FAM201AQ5SY85 155 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 NANOGP8Q6NSW7 305 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 TCF24Q7RTU0 167 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 HSD17B13Q7Z5P4 300 aaPredicted RBP3.93□□□□□ -1.78
PCF11-202ENST00000528336 ZNF567Q8N184 647 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 SLC25A45Q8N413 288 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 DEFB125Q8N687 156 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 OR9I1Q8NGQ6 314 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 SLC35G5Q96KT7 338 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 IMMP1LQ96LU5 166 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 ZNF184Q99676 751 aaPredicted RBP3.93□□□□□ -1.78
PCF11-202ENST00000528336 C2orf88Q9BSF0 95 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 SAMD10Q9BYL1 202 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 SH3BGRL3Q9H299 93 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 NANOGQ9H9S0 305 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 CCL28Q9NRJ3 127 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 RPS6KB2Q9UBS0 482 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 SS18L2Q9UHA2 77 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 GPR179Q6PRD1 2367 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 WDFY4Q6ZS81 3184 aa3.93□□□□□ -1.78
PCF11-202ENST00000528336 MYO18AQ92614 2054 aaKnown RBP3.92□□□□□ -1.78
PCF11-202ENST00000528336 IGHV6-1A0A0B4J1U7 121 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 IGHV1OR15-9A0A0B4J2B8 117 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 A0A1W2PRE2 83 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 PLAC8L1A1L4L8 177 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 MAP1LC3B2A6NCE7 125 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 C10orf142B7Z368 130 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 SLC17A3O00476 420 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 HLA-DQB2P05538 268 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 AKR1C3P42330 323 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 TAS2R46P59540 309 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 MAXP61244 160 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 RPL26P61254 145 aaKnown RBP3.92□□□□□ -1.78
PCF11-202ENST00000528336 ZNF404Q494X3 552 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 KLHL12Q53G59 568 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 CASC10Q5T4H9 136 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 IDO2Q6ZQW0 420 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 VN1R4Q7Z5H5 301 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 ANGPTL5Q86XS5 388 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 OSR2Q8N2R0 312 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 ZIC4Q8N9L1 334 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 OR11H6Q8NGC7 330 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 OR4M1Q8NGD0 313 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 OR9A2Q8NGT5 310 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 OR10G6Q8NH81 332 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 GRPEL2Q8TAA5 225 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 C1orf54Q8WWF1 131 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 L3HYPDHQ96EM0 354 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 SMIM8Q96KF7 97 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 OR52B2Q96RD2 323 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 MAP1LC3BQ9GZQ8 125 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 SLC25A31Q9H0C2 315 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 ZDHHC11Q9H8X9 412 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 EDA2RQ9HAV5 297 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 FBXL12Q9NXK8 326 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 PRNDQ9UKY0 176 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 RPL26L1Q9UNX3 145 aaKnown RBP3.92□□□□□ -1.78
PCF11-202ENST00000528336 PSG8Q9UQ74 426 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 F11RQ9Y624 299 aaKnown RBP3.92□□□□□ -1.78
PCF11-202ENST00000528336 RFNGQ9Y644 331 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 ZNF780BQ9Y6R6 833 aa3.92□□□□□ -1.78
PCF11-202ENST00000528336 SMIM26A0A096LP01 95 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 A0A1B0GV50 99 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 A0A1B0GV90 55 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 KRTAP4-16G5E9R7 235 aaPredicted RBP3.91□□□□□ -1.78
PCF11-202ENST00000528336 EIF1BO60739 113 aaKnown RBP3.91□□□□□ -1.78
PCF11-202ENST00000528336 SULT1C4O75897 302 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 DHRS3O75911 302 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 IGHMP01871 453 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 HBZP02008 142 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms