RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 NDUFB8O95169 186 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 MT-CO2P00403 227 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 BMP5P22003 454 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 ARR3P36575 388 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 WNT5AP41221 380 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 ATP5G3P48201 142 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 SSR4P51571 173 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 GPM6AP51674 278 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 PRRX1P54821 245 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 FOXL2P58012 376 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 RHOBP62745 196 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 RBX1P62877 108 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 TFF3Q07654 80 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 UBE2V1Q13404 147 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 TRA2AQ13595 282 aaKnown RBP eCLIP4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 PMCHL1Q16048 86 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 IZUMO4Q1ZYL8 232 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 CLEC12BQ2HXU8 276 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 RPEL1Q2QD12 228 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 CEACAM16Q2WEN9 425 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 HLA-DRB5Q30154 266 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 ZNF718Q3SXZ3 478 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 PDLIM3Q53GG5 364 aaPredicted RBP4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 ZNF468Q5VIY5 522 aaPredicted RBP4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 PRAMEF20Q5VT98 475 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 C20orf204Q6ZNR8 217 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 GGNQ86UU5 652 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 ZGRF1Q86YA3 2104 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 DRAM1Q8N682 238 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 CPEB3Q8NE35 698 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 OR1L6Q8NGR2 347 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 OR52E5Q8NH55 327 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 FGFBP3Q8TAT2 258 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 MRGPRDQ8TDS7 321 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 VN1R17PQ8TDU5 208 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 C22orf15Q8WYQ4 148 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 KCNS1Q96KK3 526 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 IMMP1LQ96LU5 166 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 UHRF2Q96PU4 802 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 HS3ST6Q96QI5 342 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 KRTAP4-6Q9BYQ5 205 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 ZNF552Q9H707 407 aaPredicted RBP4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 OSTCQ9NRP0 149 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 MRPL27Q9P0M9 148 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 OR1A1Q9P1Q5 309 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 SLC25A10Q9UBX3 287 aaPredicted RBP4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 PPP1R3CQ9UQK1 317 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 LAMTOR2Q9Y2Q5 125 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 PAM16Q9Y3D7 125 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 TBL2Q9Y4P3 447 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 USP9XQ93008 2570 aaPredicted RBP4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 TENM4Q6N022 2769 aa4.14□□□□□ -1.75
CTNNA1-241ENST00000524127 PCNX1Q96RV3 2341 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 MYO18BQ8IUG5 2567 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 SPTAN1Q13813 2472 aaKnown RBP4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 DOPEY2Q9Y3R5 2298 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 TRBV20OR9-2A0A075B6H5 130 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 IGHV1-45A0A0A0MS14 117 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 IGHV2-26A0A0B4J1V2 119 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 C15orf62A8K5M9 175 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 IFNL4K9M1U5 179 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 FCN1O00602 326 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 SYNGR1O43759 233 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 HYPMO75409 117 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 S1PR2O95136 353 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 PPBPP02775 128 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 CCL3P10147 92 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 RAC2P15153 192 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 CBLN1P23435 193 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 NTF4P34130 210 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 CDKN1AP38936 164 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 HNRNPA3P51991 378 aaKnown RBP4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 PTTG1IPP53801 180 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 CLDN18P56856 261 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 MLF1P58340 268 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 UBE2G2P60604 165 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 ERVK11-1P61568 191 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 CX3CL1P78423 397 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 ARF1P84077 181 aaKnown RBP4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 PMP22Q01453 160 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 ZNF146Q15072 292 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 TDRG1Q3Y452 100 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 SPATA45Q537H7 98 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 SPATA46Q5T0L3 261 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 FAM162BQ5T6X4 162 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 ATP1A1-AS1Q5TC04 95 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 RASL11AQ6T310 242 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 FAM180AQ6UWF9 173 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 TCF23Q7RTU1 214 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 LRP11Q86VZ4 500 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 STPG4Q8N801 248 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 ZNF114Q8NC26 417 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 ZNF738Q8NE65 137 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 OR4P4Q8NGL7 312 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 OR1L1Q8NH94 360 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 OCC1Q8TAD7 63 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 WIPF2Q8TF74 440 aaPredicted RBP4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 STARD4Q96DR4 205 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 OR6C1Q96RD1 312 aa4.13□□□□□ -1.75
CTNNA1-241ENST00000524127 HSD17B10Q99714 261 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms