RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 UPK2O00526 184 aa12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 MED6O75586 246 aa12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 KBTBD11O94819 623 aa12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 IGLV2-23P01705 113 aa12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 SNRNP70P08621 437 aaKnown RBP12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 NUP62P37198 522 aaPredicted RBP12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 VAMP2P63027 116 aa12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 IFITM2Q01629 132 aa12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 TNFRSF9Q07011 255 aa12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 KLF17Q5JT82 389 aaPredicted RBP12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 C9orf62Q8N4C0 152 aa12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 INO80EQ8NBZ0 244 aaPredicted RBP12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 OR2T10Q8NGZ9 312 aa12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 RITA1Q96K30 269 aa12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 QTRT1Q9BXR0 403 aaKnown RBP12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 HSPB7Q9UBY9 170 aa12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 TNFSF18Q9UNG2 199 aa12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 HECTD1Q9ULT8 2610 aa12.11□□□□□ -0.47
HMBOX1-210ENST00000523613 C15orf61A6NNL5 157 aa12.1□□□□□ -0.47
HMBOX1-210ENST00000523613 SYNGR2O43760 224 aa12.1□□□□□ -0.47
HMBOX1-210ENST00000523613 SLC25A17O43808 307 aa12.1□□□□□ -0.47
HMBOX1-210ENST00000523613 IL6RP08887 468 aaPredicted RBP12.1□□□□□ -0.47
HMBOX1-210ENST00000523613 BPIFB3P59826 476 aa12.1□□□□□ -0.47
HMBOX1-210ENST00000523613 TEX45Q8NA69 505 aa12.1□□□□□ -0.47
HMBOX1-210ENST00000523613 MFFQ9GZY8 342 aa12.1□□□□□ -0.47
HMBOX1-210ENST00000523613 NUP50Q9UKX7 468 aa12.1□□□□□ -0.47
HMBOX1-210ENST00000523613 FOXA2Q9Y261 457 aaPredicted RBP12.1□□□□□ -0.47
HMBOX1-210ENST00000523613 HSPB11Q9Y547 144 aa12.1□□□□□ -0.47
HMBOX1-210ENST00000523613 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.1□□□□□ -0.472e-6■■□□□ 14.1
HMBOX1-210ENST00000523613 A0A0U1RQK1 487 aa12.09□□□□□ -0.47
HMBOX1-210ENST00000523613 CHST1O43916 411 aa12.09□□□□□ -0.47
HMBOX1-210ENST00000523613 IFNA17P01571 189 aa12.09□□□□□ -0.47
HMBOX1-210ENST00000523613 FAM106CPP0CH98 169 aa12.09□□□□□ -0.47
HMBOX1-210ENST00000523613 CD24P25063 80 aa12.09□□□□□ -0.47
HMBOX1-210ENST00000523613 HNF4GQ14541 408 aa12.09□□□□□ -0.47
HMBOX1-210ENST00000523613 PSG5Q15238 335 aa12.09□□□□□ -0.47
HMBOX1-210ENST00000523613 AARDQ4LEZ3 155 aa12.09□□□□□ -0.47
HMBOX1-210ENST00000523613 ZNF429Q86V71 674 aa12.09□□□□□ -0.47
HMBOX1-210ENST00000523613 NANPQ8TBE9 248 aa12.09□□□□□ -0.47
HMBOX1-210ENST00000523613 TMEM167AQ8TBQ9 72 aa12.09□□□□□ -0.47
HMBOX1-210ENST00000523613 EAF1Q96JC9 268 aaPredicted RBP12.09□□□□□ -0.47
HMBOX1-210ENST00000523613 RAB40CQ96S21 281 aa12.09□□□□□ -0.47
HMBOX1-210ENST00000523613 RBKSQ9H477 322 aa12.09□□□□□ -0.47
HMBOX1-210ENST00000523613 TMEM14BQ9NUH8 114 aa12.09□□□□□ -0.47
HMBOX1-210ENST00000523613 FKBP11Q9NYL4 201 aa12.09□□□□□ -0.47
HMBOX1-210ENST00000523613 CEBPZOSA8MTT3 80 aa12.08□□□□□ -0.47
HMBOX1-210ENST00000523613 SPDEFO95238 335 aa12.08□□□□□ -0.47
HMBOX1-210ENST00000523613 SPCS3P61009 180 aa12.08□□□□□ -0.47
HMBOX1-210ENST00000523613 MMDQ15546 238 aa12.08□□□□□ -0.47
HMBOX1-210ENST00000523613 OR52E5Q8NH55 327 aa12.08□□□□□ -0.47
HMBOX1-210ENST00000523613 OR51B2Q9Y5P1 312 aa12.08□□□□□ -0.47
HMBOX1-210ENST00000523613 PDZD2O15018 2839 aa12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 CSMD2Q7Z408 3487 aa12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 GPR137BO60478 399 aa12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 FBP1P09467 338 aa12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 TMEM11P17152 192 aa12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 CXCL2P19875 107 aa12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 CNTFRP26992 372 aa12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 P2RY1P47900 373 aa12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 AP2S1P53680 142 aaPredicted RBP12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 RPL23AP62750 156 aaKnown RBP12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 RPL8P62917 257 aaKnown RBP12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 EBI3Q14213 229 aa12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 LGALSLQ3ZCW2 172 aaPredicted RBP12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 ACOT7LQ6ZUV0 252 aa12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 THNSL2Q86YJ6 484 aa12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 CLCC1Q96S66 551 aa12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 ZC4H2Q9NQZ6 224 aa12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 KIAA1456Q9P272 454 aa12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 METTL1Q9UBP6 276 aaKnown RBP12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 ASH1LQ9NR48 2969 aaKnown RBP12.08□□□□□ -0.48
HMBOX1-210ENST00000523613 NBR2O15453 112 aa12.07□□□□□ -0.48
HMBOX1-210ENST00000523613 KCNAB3O43448 404 aa12.07□□□□□ -0.48
HMBOX1-210ENST00000523613 OR2F2O95006 317 aa12.07□□□□□ -0.48
HMBOX1-210ENST00000523613 FGF2P09038 288 aa12.07□□□□□ -0.48
HMBOX1-210ENST00000523613 IAPPP10997 89 aa12.07□□□□□ -0.48
HMBOX1-210ENST00000523613 C4BPBP20851 252 aa12.07□□□□□ -0.48
HMBOX1-210ENST00000523613 OR2F1Q13607 317 aa12.07□□□□□ -0.48
HMBOX1-210ENST00000523613 PLGLAQ15195 96 aa12.07□□□□□ -0.48
HMBOX1-210ENST00000523613 TEX29Q8N6K0 151 aa12.07□□□□□ -0.48
HMBOX1-210ENST00000523613 DTD1Q8TEA8 209 aa12.07□□□□□ -0.48
HMBOX1-210ENST00000523613 COMMD5Q9GZQ3 224 aa12.07□□□□□ -0.48
HMBOX1-210ENST00000523613 MEGF9Q9H1U4 602 aa12.07□□□□□ -0.48
HMBOX1-210ENST00000523613 C11orf1Q9H5F2 150 aa12.07□□□□□ -0.48
HMBOX1-210ENST00000523613 TCF19Q9Y242 345 aa12.07□□□□□ -0.48
HMBOX1-210ENST00000523613 ZNF257Q9Y2Q1 563 aa12.07□□□□□ -0.48
HMBOX1-210ENST00000523613 A0A0D9SG52 128 aa12.06□□□□□ -0.48
HMBOX1-210ENST00000523613 RRHO14718 337 aa12.06□□□□□ -0.48
HMBOX1-210ENST00000523613 CRYGBP07316 175 aa12.06□□□□□ -0.48
HMBOX1-210ENST00000523613 RPL12P30050 165 aaKnown RBP12.06□□□□□ -0.48
HMBOX1-210ENST00000523613 CAV2P51636 162 aa12.06□□□□□ -0.48
HMBOX1-210ENST00000523613 DYNLT3P51808 116 aa12.06□□□□□ -0.48
HMBOX1-210ENST00000523613 HSPE1P61604 102 aaKnown RBP12.06□□□□□ -0.48
HMBOX1-210ENST00000523613 ZNF345Q14585 488 aa12.06□□□□□ -0.48
HMBOX1-210ENST00000523613 PDLIM3Q53GG5 364 aaPredicted RBP12.06□□□□□ -0.48
HMBOX1-210ENST00000523613 SPINK9Q5DT21 86 aa12.06□□□□□ -0.48
HMBOX1-210ENST00000523613 FAM120AOSQ5T036 256 aa12.06□□□□□ -0.48
HMBOX1-210ENST00000523613 MMD2Q8IY49 270 aa12.06□□□□□ -0.48
HMBOX1-210ENST00000523613 NPBQ8NG41 125 aa12.06□□□□□ -0.48
HMBOX1-210ENST00000523613 OR5B3Q8NH48 314 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms