RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 SMPXQ9UHP9 88 aa9.89□□□□□ -0.83
NKX3-1-202ENST00000523261 MGAT4AQ9UM21 535 aa9.89□□□□□ -0.83
NKX3-1-202ENST00000523261 IGKV3-7A0A075B6H7 116 aa9.88□□□□□ -0.83
NKX3-1-202ENST00000523261 LINC00473A8K010 186 aa9.88□□□□□ -0.83
NKX3-1-202ENST00000523261 J3QL48 77 aa9.88□□□□□ -0.83
NKX3-1-202ENST00000523261 HTR2CP28335 458 aa9.88□□□□□ -0.83
NKX3-1-202ENST00000523261 DUTP33316 252 aaKnown RBP9.88□□□□□ -0.83
NKX3-1-202ENST00000523261 RPS27AP62979 156 aaKnown RBP9.88□□□□□ -0.83
NKX3-1-202ENST00000523261 CCDC58Q4VC31 144 aa9.88□□□□□ -0.83
NKX3-1-202ENST00000523261 TMEM41BQ5BJD5 291 aa9.88□□□□□ -0.83
NKX3-1-202ENST00000523261 LEMD1Q68G75 181 aa9.88□□□□□ -0.83
NKX3-1-202ENST00000523261 OR10K2Q6IF99 312 aa9.88□□□□□ -0.83
NKX3-1-202ENST00000523261 OR2A7Q96R45 310 aa9.88□□□□□ -0.83
NKX3-1-202ENST00000523261 FAM107BQ9H098 131 aa9.88□□□□□ -0.83
NKX3-1-202ENST00000523261 RNF167Q9H6Y7 350 aa9.88□□□□□ -0.83
NKX3-1-202ENST00000523261 Q9N2K0 584 aa9.88□□□□□ -0.83
NKX3-1-202ENST00000523261 NBDYA0A0U1RRE5 68 aa9.87□□□□□ -0.83
NKX3-1-202ENST00000523261 NDUFA4O00483 81 aa9.87□□□□□ -0.83
NKX3-1-202ENST00000523261 REG1AP05451 166 aa9.87□□□□□ -0.83
NKX3-1-202ENST00000523261 DEFA4P12838 97 aa9.87□□□□□ -0.83
NKX3-1-202ENST00000523261 C4BPBP20851 252 aa9.87□□□□□ -0.83
NKX3-1-202ENST00000523261 PTBP1P26599 531 aaKnown RBP eCLIP9.87□□□□□ -0.83
NKX3-1-202ENST00000523261 OR2G6Q5TZ20 316 aa9.87□□□□□ -0.83
NKX3-1-202ENST00000523261 ADTRPQ96IZ2 230 aa9.87□□□□□ -0.83
NKX3-1-202ENST00000523261 NICN1Q9BSH3 213 aa9.87□□□□□ -0.83
NKX3-1-202ENST00000523261 GHRLQ9UBU3 117 aa9.87□□□□□ -0.83
NKX3-1-202ENST00000523261 AASSQ9UDR5 926 aa9.87□□□□□ -0.83
NKX3-1-202ENST00000523261 AK3Q9UIJ7 227 aa9.87□□□□□ -0.83
NKX3-1-202ENST00000523261 TBC1D24Q9ULP9 559 aa9.87□□□□□ -0.83
NKX3-1-202ENST00000523261 TRBV5-7A0A0A0MS05 114 aa9.86□□□□□ -0.83
NKX3-1-202ENST00000523261 OR2T8A6NH00 312 aa9.86□□□□□ -0.83
NKX3-1-202ENST00000523261 CHEK1O14757 476 aa9.86□□□□□ -0.83
NKX3-1-202ENST00000523261 PSMD7P51665 324 aa9.86□□□□□ -0.83
NKX3-1-202ENST00000523261 FAM3BP58499 235 aaPredicted RBP9.86□□□□□ -0.83
NKX3-1-202ENST00000523261 DEFB131AP59861 70 aa9.86□□□□□ -0.83
NKX3-1-202ENST00000523261 Q499Y3 187 aa9.86□□□□□ -0.83
NKX3-1-202ENST00000523261 FAM90A2PQ658T7 463 aa9.86□□□□□ -0.83
NKX3-1-202ENST00000523261 STHQ8IWL8 128 aa9.86□□□□□ -0.83
NKX3-1-202ENST00000523261 VKORC1L1Q8N0U8 176 aa9.86□□□□□ -0.83
NKX3-1-202ENST00000523261 GBGT1Q8N5D6 347 aa9.86□□□□□ -0.83
NKX3-1-202ENST00000523261 CSNK1G2-AS1Q8NCQ2 148 aa9.86□□□□□ -0.83
NKX3-1-202ENST00000523261 OR6M1Q8NGM8 313 aa9.86□□□□□ -0.83
NKX3-1-202ENST00000523261 FRZBQ92765 325 aa9.86□□□□□ -0.83
NKX3-1-202ENST00000523261 RHPN1-AS1Q9BWJ2 59 aa9.86□□□□□ -0.83
NKX3-1-202ENST00000523261 OR51E2Q9H255 320 aa9.86□□□□□ -0.83
NKX3-1-202ENST00000523261 A0A1W2PPK0 400 aa9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 SNTNA6NMZ2 147 aa9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 OGG1O15527 345 aa9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 DCTN3O75935 186 aa9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 CD3GP09693 182 aa9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 LIMS3P0CW19 117 aa9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 LIMS4P0CW20 117 aa9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 SRMP19623 302 aa9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 XGP55808 180 aa9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 RPS11P62280 158 aaKnown RBP eCLIP9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 FLOT2Q14254 428 aa9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 ATP6AP1Q15904 470 aa9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 TRPT1Q86TN4 253 aaKnown RBP9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 SMIM19Q96E16 107 aa9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 UQCC2Q9BRT2 126 aa9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 TM2D1Q9BX74 207 aa9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 TMEM59Q9BXS4 323 aa9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 PLEKHJ1Q9NW61 149 aa9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 SMPD3Q9NY59 655 aaPredicted RBP9.85□□□□□ -0.83
NKX3-1-202ENST00000523261 A0A0A6YYD4 124 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 IGHV7-4-1A0A0J9YVY3 117 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 CGB1A6NKQ9 187 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 C15orf62A8K5M9 175 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 F8W735 103 aaPredicted RBP9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 DFFBO76075 338 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 KBTBD11O94819 623 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 SPP1P10451 314 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 MAS1LP35410 378 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 SERPINB10P48595 397 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 ARFRP1Q13795 201 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 TMEM116Q8NCL8 245 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 TMEM167AQ8TBQ9 72 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 GIMAP1Q8WWP7 306 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 BSCL2Q96G97 398 aaPredicted RBP9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 ZNF414Q96IQ9 312 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 YTHDF1Q9BYJ9 559 aaKnown RBP9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 AMBNQ9NP70 447 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 TMEM14BQ9NUH8 114 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 CLEC5AQ9NY25 188 aa9.84□□□□□ -0.83
NKX3-1-202ENST00000523261 IGHV3-49A0A0A0MS15 119 aa9.83□□□□□ -0.84
NKX3-1-202ENST00000523261 TRDCB7Z8K6 153 aa9.83□□□□□ -0.84
NKX3-1-202ENST00000523261 FCGR3BO75015 233 aa9.83□□□□□ -0.84
NKX3-1-202ENST00000523261 UBBP0CG47 229 aa9.83□□□□□ -0.84
NKX3-1-202ENST00000523261 SPSB3Q6PJ21 355 aa9.83□□□□□ -0.84
NKX3-1-202ENST00000523261 PUSL1Q8N0Z8 303 aaKnown RBP9.83□□□□□ -0.84
NKX3-1-202ENST00000523261 FAM24BQ8N5W8 94 aa9.83□□□□□ -0.84
NKX3-1-202ENST00000523261 OR52I1Q8NGK6 324 aa9.83□□□□□ -0.84
NKX3-1-202ENST00000523261 VN1R17PQ8TDU5 208 aa9.83□□□□□ -0.84
NKX3-1-202ENST00000523261 GGHQ92820 318 aa9.83□□□□□ -0.84
NKX3-1-202ENST00000523261 CMTM3Q96MX0 182 aa9.83□□□□□ -0.84
NKX3-1-202ENST00000523261 DCUN1D5Q9BTE7 237 aa9.83□□□□□ -0.84
NKX3-1-202ENST00000523261 KCNK15Q9H427 330 aa9.83□□□□□ -0.84
NKX3-1-202ENST00000523261 C12orf4Q9NQ89 552 aa9.83□□□□□ -0.84
NKX3-1-202ENST00000523261 HMCN2Q8NDA2 5059 aa9.82□□□□□ -0.84
NKX3-1-202ENST00000523261 BET1O15155 118 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms