RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 CSRP2Q16527 193 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 C10orf91Q5T1B1 145 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 C1QTNF5Q9BXJ0 243 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 TP53BP1Q12888 1972 aaPredicted RBP11.72□□□□□ -0.53
SYNPO-205ENST00000522122 SFXN3Q9BWM7 321 aa11.72□□□□□ -0.53
SYNPO-205ENST00000522122 ANAPC10Q9UM13 185 aa11.72□□□□□ -0.53
SYNPO-205ENST00000522122 TMEM56-RWDD3S4R434 201 aa11.72□□□□□ -0.53
SYNPO-205ENST00000522122 OR8A1Q8NGG7 326 aa11.72□□□□□ -0.53
SYNPO-205ENST00000522122 ZNF703Q9H7S9 590 aaPredicted RBP11.72□□□□□ -0.53
SYNPO-205ENST00000522122 TNFRSF19Q9NS68 423 aa11.72□□□□□ -0.53
SYNPO-205ENST00000522122 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.72□□□□□ -0.53
SYNPO-205ENST00000522122 IFITM10A6NMD0 228 aa11.72□□□□□ -0.53
SYNPO-205ENST00000522122 CRYBB3P26998 211 aa11.72□□□□□ -0.53
SYNPO-205ENST00000522122 MRPL14Q6P1L8 145 aaKnown RBP11.72□□□□□ -0.53
SYNPO-205ENST00000522122 CLDND2Q8NHS1 167 aa11.72□□□□□ -0.53
SYNPO-205ENST00000522122 RBM14Q96PK6 669 aaKnown RBP11.72□□□□□ -0.53
SYNPO-205ENST00000522122 ELOVL1Q9BW60 279 aa11.72□□□□□ -0.53
SYNPO-205ENST00000522122 GP6Q9HCN6 339 aa11.72□□□□□ -0.53
SYNPO-205ENST00000522122 FTH1P19P0C7X4 201 aa11.71□□□□□ -0.53
SYNPO-205ENST00000522122 ERVFRD-1P60508 538 aa11.71□□□□□ -0.53
SYNPO-205ENST00000522122 MST1LQ2TV78 715 aa11.71□□□□□ -0.53
SYNPO-205ENST00000522122 BPIFA4PQ86YQ2 179 aa11.71□□□□□ -0.53
SYNPO-205ENST00000522122 LEAP2Q969E1 77 aa11.71□□□□□ -0.53
SYNPO-205ENST00000522122 SLC25A33Q9BSK2 321 aa11.71□□□□□ -0.53
SYNPO-205ENST00000522122 RHBDL1O75783 438 aa11.71□□□□□ -0.53
SYNPO-205ENST00000522122 Q6ZT83 130 aa11.71□□□□□ -0.53
SYNPO-205ENST00000522122 VKORC1L1Q8N0U8 176 aa11.71□□□□□ -0.53
SYNPO-205ENST00000522122 ROS1P08922 2347 aa11.71□□□□□ -0.53
SYNPO-205ENST00000522122 IGKV1D-8A0A087WSZ0 117 aa11.71□□□□□ -0.53
SYNPO-205ENST00000522122 C12orf77C9JDV5 145 aa11.71□□□□□ -0.53
SYNPO-205ENST00000522122 EGR1P18146 543 aa11.71□□□□□ -0.53
SYNPO-205ENST00000522122 LRRC75BQ2VPJ9 315 aa11.71□□□□□ -0.53
SYNPO-205ENST00000522122 RTN4RL2Q86UN3 420 aa11.71□□□□□ -0.53
SYNPO-205ENST00000522122 SIGLEC12Q96PQ1 595 aa11.71□□□□□ -0.53
SYNPO-205ENST00000522122 SLC25A17O43808 307 aa11.71□□□□□ -0.54
SYNPO-205ENST00000522122 VENTXO95231 258 aa11.71□□□□□ -0.54
SYNPO-205ENST00000522122 CELA3AP09093 270 aa11.71□□□□□ -0.54
SYNPO-205ENST00000522122 OR4B1Q8NGF8 309 aa11.71□□□□□ -0.54
SYNPO-205ENST00000522122 OR4D5Q8NGN0 318 aa11.71□□□□□ -0.54
SYNPO-205ENST00000522122 COLQQ9Y215 455 aaPredicted RBP11.71□□□□□ -0.54
SYNPO-205ENST00000522122 CLDN16Q9Y5I7 305 aa11.71□□□□□ -0.54
SYNPO-205ENST00000522122 KIAA1549LQ6ZVL6 1849 aa11.71□□□□□ -0.54
SYNPO-205ENST00000522122 PROB1E7EW31 1015 aa11.7□□□□□ -0.54
SYNPO-205ENST00000522122 NUBP1P53384 320 aa11.7□□□□□ -0.54
SYNPO-205ENST00000522122 OR5R1Q8NH85 324 aa11.7□□□□□ -0.54
SYNPO-205ENST00000522122 NABP2Q9BQ15 211 aa11.7□□□□□ -0.54
SYNPO-205ENST00000522122 C19orf24Q9BVV8 132 aa11.7□□□□□ -0.54
SYNPO-205ENST00000522122 WNT9BO14905 357 aa11.7□□□□□ -0.54
SYNPO-205ENST00000522122 PET117Q6UWS5 81 aa11.7□□□□□ -0.54
SYNPO-205ENST00000522122 C1QL4Q86Z23 238 aa11.7□□□□□ -0.54
SYNPO-205ENST00000522122 PNRC2Q9NPJ4 139 aaKnown RBP11.7□□□□□ -0.54
SYNPO-205ENST00000522122 IFNL4K9M1U5 179 aa11.7□□□□□ -0.54
SYNPO-205ENST00000522122 ALPK3Q96L96 1907 aa11.7□□□□□ -0.54
SYNPO-205ENST00000522122 DENND4CQ5VZ89 1909 aa11.7□□□□□ -0.54
SYNPO-205ENST00000522122 HOXA4Q00056 320 aaPredicted RBP11.7□□□□□ -0.54
SYNPO-205ENST00000522122 FXYD3Q14802 87 aa11.7□□□□□ -0.54
SYNPO-205ENST00000522122 ATP1A1-AS1Q5TC04 95 aa11.7□□□□□ -0.54
SYNPO-205ENST00000522122 CDC42EP3Q9UKI2 254 aa11.7□□□□□ -0.54
SYNPO-205ENST00000522122 OBSL1O75147 1896 aa11.7□□□□□ -0.54
SYNPO-205ENST00000522122 ZNF729A6NN14 1252 aaPredicted RBP11.69□□□□□ -0.54
SYNPO-205ENST00000522122 RPL13AP40429 203 aaKnown RBP11.69□□□□□ -0.54
SYNPO-205ENST00000522122 ICAM4Q14773 271 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 CYP2G1PQ6ZSU1 146 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 SFRP2Q96HF1 295 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 NUP210Q8TEM1 1887 aaPredicted RBP11.69□□□□□ -0.54
SYNPO-205ENST00000522122 A6NDN8 102 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 PMCHL1Q16048 86 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 RIF1Q5UIP0 2472 aaKnown RBP11.69□□□□□ -0.54
SYNPO-205ENST00000522122 CD40P25942 277 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 GCHFRP30047 84 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 RPL24P83731 157 aaKnown RBP11.69□□□□□ -0.54
SYNPO-205ENST00000522122 REC114Q7Z4M0 266 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 OR51G1Q8NGK1 321 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 GATAD1Q8WUU5 269 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 RNF166Q96A37 237 aaPredicted RBP11.69□□□□□ -0.54
SYNPO-205ENST00000522122 ATP5IP56385 69 aaPredicted RBP11.69□□□□□ -0.54
SYNPO-205ENST00000522122 TMEM30BQ3MIR4 351 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 KIAA1644Q3SXP7 199 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 HEPN1Q6WQI6 88 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 TMEM183AQ8IXX5 376 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 STPG3Q8N7X2 389 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 ZNRF1Q8ND25 227 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 OR4C13Q8NGP0 309 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 NPCDR1Q9BY65 106 aa11.69□□□□□ -0.54
SYNPO-205ENST00000522122 ZNF146Q15072 292 aa11.68□□□□□ -0.54
SYNPO-205ENST00000522122 ECSCRQ19T08 205 aa11.68□□□□□ -0.54
SYNPO-205ENST00000522122 EFNA2O43921 213 aa11.68□□□□□ -0.54
SYNPO-205ENST00000522122 OR4A5Q8NH83 315 aa11.68□□□□□ -0.54
SYNPO-205ENST00000522122 IGKV3-7A0A075B6H7 116 aa11.68□□□□□ -0.54
SYNPO-205ENST00000522122 A0A0G2JMM0 328 aa11.68□□□□□ -0.54
SYNPO-205ENST00000522122 A0A1W2PPB8 328 aa11.68□□□□□ -0.54
SYNPO-205ENST00000522122 A0A1W2PRS3 328 aa11.68□□□□□ -0.54
SYNPO-205ENST00000522122 KIR3DP1A8MWS1 328 aa11.68□□□□□ -0.54
SYNPO-205ENST00000522122 J3KRW8 73 aa11.68□□□□□ -0.54
SYNPO-205ENST00000522122 SRIP30626 198 aa11.68□□□□□ -0.54
SYNPO-205ENST00000522122 LYRM7Q5U5X0 104 aa11.68□□□□□ -0.54
SYNPO-205ENST00000522122 SCGB1D4Q6XE38 83 aa11.68□□□□□ -0.54
SYNPO-205ENST00000522122 LINC00469Q8N7U9 141 aa11.68□□□□□ -0.54
SYNPO-205ENST00000522122 FOXJ2Q9P0K8 574 aa11.68□□□□□ -0.54
SYNPO-205ENST00000522122 HILPDAQ9Y5L2 63 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms