RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 GBGT1Q8N5D6 347 aa13.78□□□□□ -0.2
USP42-207ENST00000521713 TMEM186Q96B77 213 aa13.78□□□□□ -0.2
USP42-207ENST00000521713 TMEM106BQ9NUM4 274 aa13.78□□□□□ -0.2
USP42-207ENST00000521713 PIN1P1O15428 100 aa13.78□□□□□ -0.2
USP42-207ENST00000521713 UCP3P55916 312 aa13.78□□□□□ -0.2
USP42-207ENST00000521713 ABHD12Q8N2K0 398 aa13.78□□□□□ -0.2
USP42-207ENST00000521713 WDR31Q8NA23 367 aa13.78□□□□□ -0.2
USP42-207ENST00000521713 CLEC7AQ9BXN2 247 aa13.78□□□□□ -0.2
USP42-207ENST00000521713 H3BVH4 76 aa13.78□□□□□ -0.2
USP42-207ENST00000521713 SS18L1O75177 396 aaPredicted RBP13.78□□□□□ -0.2
USP42-207ENST00000521713 RLFQ13129 1914 aa13.78□□□□□ -0.2
USP42-207ENST00000521713 F5H697 171 aa13.78□□□□□ -0.2
USP42-207ENST00000521713 IGHV1-2P23083 117 aa13.78□□□□□ -0.2
USP42-207ENST00000521713 RPL8P62917 257 aaKnown RBP13.78□□□□□ -0.2
USP42-207ENST00000521713 SFRP2Q96HF1 295 aa13.78□□□□□ -0.2
USP42-207ENST00000521713 SMIM8Q96KF7 97 aa13.78□□□□□ -0.2
USP42-207ENST00000521713 QTRT1Q9BXR0 403 aaKnown RBP13.78□□□□□ -0.2
USP42-207ENST00000521713 C5orf66Q9H5L9 145 aa13.78□□□□□ -0.2
USP42-207ENST00000521713 IGHV2OR16-5A0A0B4J2B6 119 aa13.77□□□□□ -0.2
USP42-207ENST00000521713 HERPUD1Q15011 391 aa13.77□□□□□ -0.2
USP42-207ENST00000521713 SNRNP40Q96DI7 357 aaKnown RBP13.77□□□□□ -0.2
USP42-207ENST00000521713 hCG_38984A0A1B0GV85 526 aa13.77□□□□□ -0.21
USP42-207ENST00000521713 BSPH1Q075Z2 132 aa13.77□□□□□ -0.21
USP42-207ENST00000521713 RARRES2Q99969 163 aa13.77□□□□□ -0.21
USP42-207ENST00000521713 PAXXQ9BUH6 204 aa13.77□□□□□ -0.21
USP42-207ENST00000521713 A1L4Q6 167 aa13.77□□□□□ -0.21
USP42-207ENST00000521713 COX6CP09669 75 aa13.77□□□□□ -0.21
USP42-207ENST00000521713 SELENOTP62341 195 aa13.77□□□□□ -0.21
USP42-207ENST00000521713 AURKAIP1Q9NWT8 199 aaPredicted RBP13.77□□□□□ -0.21
USP42-207ENST00000521713 UFC1Q9Y3C8 167 aa13.77□□□□□ -0.21
USP42-207ENST00000521713 MTCL1Q9Y4B5 1905 aaKnown RBP13.77□□□□□ -0.21
USP42-207ENST00000521713 TRAV9-1A0A075B6T8 112 aa13.76□□□□□ -0.21
USP42-207ENST00000521713 GREB1Q4ZG55 1949 aa13.76□□□□□ -0.21
USP42-207ENST00000521713 IGHV3-72A0A0B4J1Y9 119 aa13.76□□□□□ -0.21
USP42-207ENST00000521713 SEMA5BQ9P283 1151 aa13.76□□□□□ -0.21
USP42-207ENST00000521713 C1QTNF5Q9BXJ0 243 aa13.76□□□□□ -0.21
USP42-207ENST00000521713 DEPPQ9NTK1 212 aa13.76□□□□□ -0.21
USP42-207ENST00000521713 FBLL1A6NHQ2 334 aaKnown RBP13.76□□□□□ -0.21
USP42-207ENST00000521713 UBE2CO00762 179 aa13.76□□□□□ -0.21
USP42-207ENST00000521713 PF4V1P10720 104 aa13.76□□□□□ -0.21
USP42-207ENST00000521713 LOXL3P58215 753 aa13.76□□□□□ -0.21
USP42-207ENST00000521713 DNM1P46Q6ZS02 220 aa13.76□□□□□ -0.21
USP42-207ENST00000521713 TMEM14DPA8MWL7 114 aa13.75□□□□□ -0.21
USP42-207ENST00000521713 ID1P41134 155 aa13.75□□□□□ -0.21
USP42-207ENST00000521713 RELBQ01201 579 aa13.75□□□□□ -0.21
USP42-207ENST00000521713 ZNF124Q15973 351 aa13.75□□□□□ -0.21
USP42-207ENST00000521713 CRYBA2P53672 197 aa13.75□□□□□ -0.21
USP42-207ENST00000521713 CTAG1AP78358 180 aa13.75□□□□□ -0.21
USP42-207ENST00000521713 LSM10Q969L4 123 aaKnown RBP13.75□□□□□ -0.21
USP42-207ENST00000521713 C19orf24Q9BVV8 132 aa13.75□□□□□ -0.21
USP42-207ENST00000521713 RABAC1Q9UI14 185 aa13.75□□□□□ -0.21
USP42-207ENST00000521713 APELAP0DMC3 54 aa13.75□□□□□ -0.21
USP42-207ENST00000521713 TMEM136Q6ZRR5 245 aa13.75□□□□□ -0.21
USP42-207ENST00000521713 CLEC5AQ9NY25 188 aa13.75□□□□□ -0.21
USP42-207ENST00000521713 NPIPB7O75200 414 aa13.74□□□□□ -0.21
USP42-207ENST00000521713 TBR1Q16650 682 aa13.74□□□□□ -0.21
USP42-207ENST00000521713 SPSB4Q96A44 273 aa13.74□□□□□ -0.21
USP42-207ENST00000521713 DMRTA1Q5VZB9 504 aa13.74□□□□□ -0.21
USP42-207ENST00000521713 ZNF646O15015 1829 aaPredicted RBP13.74□□□□□ -0.21
USP42-207ENST00000521713 THADAQ6YHU6 1953 aa13.74□□□□□ -0.21
USP42-207ENST00000521713 NPBWR2P48146 333 aa13.74□□□□□ -0.21
USP42-207ENST00000521713 CYP2G1PQ6ZSU1 146 aa13.74□□□□□ -0.21
USP42-207ENST00000521713 REPIN1Q9BWE0 567 aaKnown RBP13.74□□□□□ -0.21
USP42-207ENST00000521713 OR4C46A6NHA9 309 aa13.74□□□□□ -0.21
USP42-207ENST00000521713 UNQ5815/PRO19632Q6UWF5 114 aa13.74□□□□□ -0.21
USP42-207ENST00000521713 DNAJC4Q9NNZ3 241 aa13.74□□□□□ -0.21
USP42-207ENST00000521713 SCN2AQ99250 2005 aa13.74□□□□□ -0.21
USP42-207ENST00000521713 ANKRD36A6QL64 1941 aa13.74□□□□□ -0.21
USP42-207ENST00000521713 DPRXA6NFQ7 191 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 UQCRFS1P47985 274 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 TWIST1Q15672 202 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 C2orf68Q2NKX9 166 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 TTC32Q5I0X7 151 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 SELENOHQ8IZQ5 122 aaKnown RBP13.73□□□□□ -0.21
USP42-207ENST00000521713 OR4C13Q8NGP0 309 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 GALNT14Q96FL9 552 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 IGKV1D-43A0A0B4J1Z2 117 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 HYPMO75409 117 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 SRIP30626 198 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 KIR2DL2P43627 348 aaPredicted RBP13.73□□□□□ -0.21
USP42-207ENST00000521713 ZNF137PP52743 207 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 NIT1Q86X76 327 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 OR10AG1Q8NH19 301 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 FAM222BQ8WU58 562 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 OR4A5Q8NH83 315 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 MIEN1Q9BRT3 115 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 MRPL13Q9BYD1 178 aaKnown RBP13.73□□□□□ -0.21
USP42-207ENST00000521713 ARHGEF17Q96PE2 2063 aaPredicted RBP13.73□□□□□ -0.21
USP42-207ENST00000521713 A0A1W2PS18 150 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 PGLYRP1O75594 196 aaPredicted RBP13.73□□□□□ -0.21
USP42-207ENST00000521713 RAB37Q96AX2 223 aa13.73□□□□□ -0.21
USP42-207ENST00000521713 M0R3E3 92 aa13.72□□□□□ -0.21
USP42-207ENST00000521713 PSG7Q13046 419 aa13.72□□□□□ -0.21
USP42-207ENST00000521713 TMEM187Q14656 261 aa13.72□□□□□ -0.21
USP42-207ENST00000521713 CXorf66Q5JRM2 361 aaPredicted RBP13.72□□□□□ -0.21
USP42-207ENST00000521713 RBKSQ9H477 322 aa13.72□□□□□ -0.21
USP42-207ENST00000521713 HIGD1AQ9Y241 93 aa13.72□□□□□ -0.21
USP42-207ENST00000521713 IGKV3-7A0A075B6H7 116 aa13.72□□□□□ -0.21
USP42-207ENST00000521713 C17orf100A8MU93 164 aa13.72□□□□□ -0.21
USP42-207ENST00000521713 STAG3L3P0CL85 134 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms