RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 FGFRL1Q8N441 504 aa8.79□□□□□ -1
MRPS28-208ENST00000521605 EIF4E3Q8N5X7 224 aaKnown RBP8.79□□□□□ -1
MRPS28-208ENST00000521605 OR2C3Q8N628 320 aa8.79□□□□□ -1
MRPS28-208ENST00000521605 RFESDQ8TAC1 157 aa8.79□□□□□ -1
MRPS28-208ENST00000521605 DDB2Q92466 427 aa8.79□□□□□ -1
MRPS28-208ENST00000521605 AIFM2Q9BRQ8 373 aa8.79□□□□□ -1
MRPS28-208ENST00000521605 DCTN5Q9BTE1 182 aa8.79□□□□□ -1
MRPS28-208ENST00000521605 DCAF16Q9NXF7 216 aa8.79□□□□□ -1
MRPS28-208ENST00000521605 C1RLQ9NZP8 487 aa8.79□□□□□ -1
MRPS28-208ENST00000521605 HSPB7Q9UBY9 170 aa8.79□□□□□ -1
MRPS28-208ENST00000521605 MIOXQ9UGB7 285 aa8.79□□□□□ -1
MRPS28-208ENST00000521605 C17orf98A8MV24 154 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 NUDT19A8MXV4 375 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 DVL1O14640 695 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 FGF16O43320 207 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 PROP1O75360 226 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 FOXH1O75593 365 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 FGF2P09038 288 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 SELLP14151 372 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 NDUFB7P17568 137 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 AKR1C2P52895 323 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 DLX6P56179 175 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 BRWD1-AS2P59051 145 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 RPL30P62888 115 aaKnown RBP8.78□□□□□ -1
MRPS28-208ENST00000521605 CT45A1Q5HYN5 189 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 TMEM200BQ69YZ2 307 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 FOXRED2Q8IWF2 684 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 PDZD9Q8IXQ8 264 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 OR52E5Q8NH55 327 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 CT45A3Q8NHU0 189 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 UBALD1Q8TB05 177 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 TCTEX1D2Q8WW35 142 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 ZDHHC16Q969W1 377 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 SMIM8Q96KF7 97 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 CIB3Q96Q77 187 aaPredicted RBP8.78□□□□□ -1
MRPS28-208ENST00000521605 S1PR3Q99500 378 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 ZNF251Q9BRH9 671 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.78□□□□□ -1
MRPS28-208ENST00000521605 LSM5Q9Y4Y9 91 aaKnown RBP8.78□□□□□ -1
MRPS28-208ENST00000521605 RNF114Q9Y508 228 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 KIAA2026Q5HYC2 2103 aa8.78□□□□□ -1
MRPS28-208ENST00000521605 BORCS7-ASMTA0A0B4J1R7 106 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 A0A0G2JRQ6 117 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 ST8SIA5O15466 376 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 SPDEFO95238 335 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 NQO2P16083 231 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 ZNF134P52741 427 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 RPL23AP62750 156 aaKnown RBP8.77□□□□□ -1.01
MRPS28-208ENST00000521605 VAMP2P63027 116 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 ZNF266Q14584 549 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 CXorf66Q5JRM2 361 aaPredicted RBP8.77□□□□□ -1.01
MRPS28-208ENST00000521605 DUX4L9Q6RFH8 374 aaPredicted RBP8.77□□□□□ -1.01
MRPS28-208ENST00000521605 ZNF841Q6ZN19 808 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 ZNF833PQ6ZTB9 187 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 REC114Q7Z4M0 266 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 ODF3L1Q8IXM7 274 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 OR4S2Q8NH73 311 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 RNASE11Q8TAA1 199 aaKnown RBP8.77□□□□□ -1.01
MRPS28-208ENST00000521605 SAT2Q96F10 170 aaPredicted RBP8.77□□□□□ -1.01
MRPS28-208ENST00000521605 C19orf12Q9NSK7 152 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 CTSZQ9UBR2 303 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 CACNG5Q9UF02 275 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 FBXL17Q9UF56 701 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 RNF150Q9ULK6 438 aa8.77□□□□□ -1.01
MRPS28-208ENST00000521605 IGHV3-43A0A0B4J1X8 118 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 PPIAL4CA0A0B4J2A2 164 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 LINC00473A8K010 186 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 WRBO00258 174 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 SYNGR2O43760 224 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 FCN3O75636 299 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 NDUFA7O95182 113 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 SCGB1D2O95969 90 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 SEC11BP0C7V7 166 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 IGHV3-43DP0DP04 118 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 RAB5CP51148 216 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 POLR2GP62487 172 aaKnown RBP eCLIP8.76□□□□□ -1.01
MRPS28-208ENST00000521605 EWSR1Q01844 656 aaKnown RBP eCLIP8.76□□□□□ -1.01
MRPS28-208ENST00000521605 TNFRSF9Q07011 255 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 ZNF273Q14593 569 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 ALKAL2Q6UX46 152 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 Q6ZRM9 215 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 ZNF429Q86V71 674 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 SLC7A5P1Q8MH63 180 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 PUSL1Q8N0Z8 303 aaKnown RBP8.76□□□□□ -1.01
MRPS28-208ENST00000521605 TMEM252Q8N6L7 170 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 LY6G5BQ8NDX9 201 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 RNF141Q8WVD5 230 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 NEIL1Q96FI4 390 aaPredicted RBP8.76□□□□□ -1.01
MRPS28-208ENST00000521605 GPHA2Q96T91 129 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 GINS3Q9BRX5 216 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 PCGF1Q9BSM1 259 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 PARD6GQ9BYG4 376 aaPredicted RBP8.76□□□□□ -1.01
MRPS28-208ENST00000521605 HIPK2Q9H2X6 1198 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 ZC4H2Q9NQZ6 224 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 INSIG2Q9Y5U4 225 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 TENM3Q9P273 2699 aa8.76□□□□□ -1.01
MRPS28-208ENST00000521605 SAA2-SAA4A0A096LPE2 208 aa8.75□□□□□ -1.01
MRPS28-208ENST00000521605 TRAV40A0A0B4J280 105 aa8.75□□□□□ -1.01
MRPS28-208ENST00000521605 hCG_1809904A0A1W2PP81 198 aa8.75□□□□□ -1.01
MRPS28-208ENST00000521605 A0A1W2PPE2 198 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms