RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 MBPP02686 304 aaPredicted RBP8.48□□□□□ -1.05
PABPC1-203ENST00000517921 SNRNP70P08621 437 aaKnown RBP8.48□□□□□ -1.05
PABPC1-203ENST00000517921 CNTFRP26992 372 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 PSMB6P28072 239 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 NKX2-1P43699 371 aaPredicted RBP8.48□□□□□ -1.05
PABPC1-203ENST00000517921 ARHGDIBP52566 201 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 S100A10P60903 97 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 UBE2KP61086 200 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 RELBQ01201 579 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 EBI3Q14213 229 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 AARDQ4LEZ3 155 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 CXorf66Q5JRM2 361 aaPredicted RBP8.48□□□□□ -1.05
PABPC1-203ENST00000517921 NOXA1Q86UR1 476 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 OR1S1Q8NH92 325 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 AIFM2Q9BRQ8 373 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 BET1LQ9NYM9 111 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 MBD2Q9UBB5 411 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 RCL1Q9Y2P8 373 aaKnown RBP8.48□□□□□ -1.05
PABPC1-203ENST00000517921 NSG2Q9Y328 171 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 SOX21Q9Y651 276 aaPredicted RBP8.48□□□□□ -1.05
PABPC1-203ENST00000517921 POMT1Q9Y6A1 747 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 C15orf61A6NNL5 157 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 FAM90A26D6RGX4 464 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 UPK2O00526 184 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 SLC25A17O43808 307 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 CD5LO43866 347 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 KBTBD11O94819 623 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 NXPH3O95157 252 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 SPDEFO95238 335 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 MOSP00540 346 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 CRYGBP07316 175 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 CD24P25063 80 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 LGALS7P47929 136 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 EIF2B2P49770 351 aaKnown RBP8.47□□□□□ -1.05
PABPC1-203ENST00000517921 NKX2-5P52952 324 aaPredicted RBP8.47□□□□□ -1.05
PABPC1-203ENST00000517921 BPIFB3P59826 476 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 OR2B8PP59922 312 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 ID3Q02535 119 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 FGL1Q08830 312 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 VMA21Q3ZAQ7 101 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 C11orf87Q6NUJ2 197 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 PRSS54Q6PEW0 395 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 FOXRED2Q8IWF2 684 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 Q8N6K4 173 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 GRPEL2Q8TAA5 225 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 EAF1Q96JC9 268 aaPredicted RBP8.47□□□□□ -1.05
PABPC1-203ENST00000517921 TSNAXQ99598 290 aaKnown RBP8.47□□□□□ -1.05
PABPC1-203ENST00000517921 RNF5Q99942 180 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 QTRT1Q9BXR0 403 aaKnown RBP8.47□□□□□ -1.05
PABPC1-203ENST00000517921 MEGF9Q9H1U4 602 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 C11orf1Q9H5F2 150 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 TPSG1Q9NRR2 321 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.47□□□□□ -1.05
PABPC1-203ENST00000517921 TMEM14BQ9NUH8 114 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 OR5AC2Q9NZP5 309 aa8.47□□□□□ -1.05
PABPC1-203ENST00000517921 LSM5Q9Y4Y9 91 aaKnown RBP8.47□□□□□ -1.05
PABPC1-203ENST00000517921 FXYD6-FXYD2A0A087WZ82 144 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 ST8SIA3O43173 380 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 DEDDO75618 318 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 PET100P0DJ07 73 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 SLC25A4P12235 298 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 LYL1P12980 280 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 DYNLT3P51808 116 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 F2RL1P55085 397 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 POLR2GP62487 172 aaKnown RBP eCLIP8.46□□□□□ -1.06
PABPC1-203ENST00000517921 TNFRSF9Q07011 255 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 HES1Q14469 280 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 HNF4GQ14541 408 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 PSG5Q15238 335 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 MRGPRG-AS1Q2M3A8 158 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 KRTAP21-3Q3LHN1 58 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 FAM120AOSQ5T036 256 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 C9orf139Q6ZV77 190 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 ZNF429Q86V71 674 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 THNSL2Q86YJ6 484 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 TEX45Q8NA69 505 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 OR2T10Q8NGZ9 312 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 OR4A16Q8NH70 328 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 OR4A5Q8NH83 315 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 VSTM2AQ8TAG5 236 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 NANPQ8TBE9 248 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 TMEM167AQ8TBQ9 72 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 HYLS1Q96M11 299 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 RNF126Q9BV68 326 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 ZFP57Q9NU63 452 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 HSPB7Q9UBY9 170 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 NUP50Q9UKX7 468 aa8.46□□□□□ -1.06
PABPC1-203ENST00000517921 FOXA2Q9Y261 457 aaPredicted RBP8.46□□□□□ -1.06
PABPC1-203ENST00000517921 HIVEP2P31629 2446 aa8.45□□□□□ -1.06
PABPC1-203ENST00000517921 MDFIC2A0A1B0GVS7 189 aa8.45□□□□□ -1.06
PABPC1-203ENST00000517921 NBR2O15453 112 aa8.45□□□□□ -1.06
PABPC1-203ENST00000517921 SSSCA1O60232 199 aa8.45□□□□□ -1.06
PABPC1-203ENST00000517921 SNAPC5O75971 98 aa8.45□□□□□ -1.06
PABPC1-203ENST00000517921 NDUFA3O95167 84 aa8.45□□□□□ -1.06
PABPC1-203ENST00000517921 FBP1P09467 338 aa8.45□□□□□ -1.06
PABPC1-203ENST00000517921 MYOD1P15172 320 aa8.45□□□□□ -1.06
PABPC1-203ENST00000517921 BRS3P32247 399 aa8.45□□□□□ -1.06
PABPC1-203ENST00000517921 MMDQ15546 238 aa8.45□□□□□ -1.06
PABPC1-203ENST00000517921 LRRC75BQ2VPJ9 315 aa8.45□□□□□ -1.06
PABPC1-203ENST00000517921 PDLIM3Q53GG5 364 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms