RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 SSTR5P35346 364 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 LYPD6Q86Y78 171 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 TMEM183AQ8IXX5 376 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 HIST3H2BBQ8N257 126 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 TMEM105Q8N8V8 129 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 RCC1LQ96I51 464 aaKnown RBP9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 OR4C12Q96R67 309 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 A0A1B0GW64 132 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 GPR6P46095 362 aaPredicted RBP9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 ECSCRQ19T08 205 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 LRP11Q86VZ4 500 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 PKIBQ9C010 78 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 CRISP2P16562 243 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 UCP1P25874 307 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM27E3Q08E93 113 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 RPEL1Q2QD12 228 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 ASCL5Q7RTU5 278 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 NPVFQ9HCQ7 196 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 C1RLQ9NZP8 487 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 TMEM56-RWDD3S4R434 201 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 IGKV1-27A0A075B6S5 117 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 IGKV1-12A0A0C4DH73 117 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 hCG_38984A0A1B0GV85 526 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 F5H697 171 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 IGKV1D-12P01611 117 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 IGHV3-48P01763 117 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 COL8A1P27658 744 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 SLC35B1P78383 322 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM162BQ5T6X4 162 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 C10orf113Q5VZT2 155 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 VAMP8Q9BV40 100 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 CALYQ9NYX4 217 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM90A10PA6NDY2 464 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM90A18PA6NE21 464 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM90A16PA6NEW6 464 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM90A20PA6NIJ5 464 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM90A8PA6NJQ4 464 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM90A7PA6NKC0 464 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM90A22PA8MWA6 464 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM90A12PA8MX19 464 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM90A5PA8MXJ8 464 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM90A23PA8MXZ1 464 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 NEURL1O76050 574 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM90A15PP0C7V4 464 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM90A13PP0C7W8 464 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM90A14PP0C7W9 464 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM90A24PP0C7X0 464 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 OR10J1P30954 320 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 Q6ZT83 130 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 TAF15Q92804 592 aaKnown RBP eCLIP9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 PLA2G2EQ9NZK7 142 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 IGKV1D-13A0A0B4J2D9 117 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 IGKV1-13P0DP09 117 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 GPX4P36969 197 aaPredicted RBP9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 SPCS3P61009 180 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 WFIKKN1Q96NZ8 548 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 WASHC3Q9Y3C0 194 aa9.18□□□□□ -0.94
PCDHGA1-202ENST00000517417 CACNA1AO00555 2505 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 IGLV3-12A0A075B6K2 115 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 TMSB15BA0A087X1C1 80 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 CBY3A6NI87 242 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 GCGP01275 180 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 COX5BP10606 129 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM201AQ5SY85 155 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 TMEM171Q8WVE6 324 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 SDF2L1Q9HCN8 221 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 PLSCR2Q9NRY7 297 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 RNF24Q9Y225 148 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 PXMP4Q9Y6I8 212 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 LOC102724200A0A096LPH7 203 aaPredicted RBP9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 MARCH11A6NNE9 402 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 ZG16O60844 167 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 SLC25A17O43808 307 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 S1PR2O95136 353 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 HTN1P15515 57 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 ZNF25P17030 456 aaPredicted RBP9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 TAS2R60P59551 318 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 ZNF788Q6ZQV5 615 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 C1orf174Q8IYL3 243 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 ZNF645Q8N7E2 425 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 FADS6Q8N9I5 356 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 LIME1Q9H400 295 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 HEATR1Q9H583 2144 aaKnown RBP9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 NDUFB4O95168 129 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 CXorf1O96002 111 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 ABHD12Q8N2K0 398 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 IL36RNQ9UBH0 155 aa9.17□□□□□ -0.94
PCDHGA1-202ENST00000517417 IER3P46695 156 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 RPL27AP46776 148 aaKnown RBP9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 ARF6P62330 175 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 MIC13Q5XKP0 118 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 DRAM1Q8N682 238 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 KLHDC1Q8N7A1 406 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 SGMS2Q8NHU3 365 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 OR5P3Q8WZ94 311 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 NABP1Q96AH0 204 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 PARLQ9H300 379 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 DCAF16Q9NXF7 216 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 ACACBO00763 2458 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 IGLV3-32A0A0A0MS00 114 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms