RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 H1FOOQ8IZA3 346 aaPredicted RBP1.93□□□□□ -2.1
HERC4-215ENST00000515753 OR2M3Q8NG83 312 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 OR1M1Q8NGA1 313 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 OR4E2Q8NGC2 313 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 OR11L1Q8NGX0 322 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 OR51H1Q8NH63 302 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 CIRBP-AS1Q8TBR5 109 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 TNFAIP8L1Q8WVP5 186 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 LCN9Q8WX39 176 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 IMP4Q96G21 291 aaKnown RBP1.93□□□□□ -2.1
HERC4-215ENST00000515753 PRAP1Q96NZ9 151 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 DOK1Q99704 481 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 C9orf16Q9BUW7 83 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 WFDC1Q9HC57 220 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 C21orf62Q9NYP8 219 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 ZNF223Q9UK11 482 aaPredicted RBP1.93□□□□□ -2.1
HERC4-215ENST00000515753 USP24Q9UPU5 2620 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 TSC2P49815 1807 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 MAP1BP46821 2468 aaKnown RBP1.93□□□□□ -2.1
HERC4-215ENST00000515753 PCNX2A6NKB5 2137 aa1.93□□□□□ -2.1
HERC4-215ENST00000515753 THADAQ6YHU6 1953 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 BAHCC1Q9P281 2608 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 PLXND1Q9Y4D7 1925 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 SCN1AP35498 2009 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 IGLV3-16A0A075B6K0 115 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 A0A0J9YY10 115 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 LOC285095A0A1B0GVY8 99 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 A0A1B0GX78 115 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 K7EM74 188 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 MFNGO00587 321 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 OR7C2O60412 319 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 KLF7O75840 302 aaPredicted RBP1.92□□□□□ -2.1
HERC4-215ENST00000515753 PROSCO94903 275 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 WISP3O95389 354 aaPredicted RBP1.92□□□□□ -2.1
HERC4-215ENST00000515753 HBZP02008 142 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 SERPINA7P05543 415 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 SEC11BP0C7V7 166 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 GTF2F2P13984 249 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 CA7P43166 264 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 SULT1A1P50225 295 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 SULT1A2P50226 295 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 RAB2AP61019 212 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 CXCR4P61073 352 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 RELAQ04206 551 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 AESQ08117 197 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 SPA17Q15506 151 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 TAF1AQ15573 450 aaPredicted RBP1.92□□□□□ -2.1
HERC4-215ENST00000515753 MRPL2Q5T653 305 aaKnown RBP1.92□□□□□ -2.1
HERC4-215ENST00000515753 NANOGP8Q6NSW7 305 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 GLT6D1Q7Z4J2 308 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 COMMD7Q86VX2 200 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 NIT1Q86X76 327 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 CYB561D1Q8N8Q1 229 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 OR10G2Q8NGC3 310 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 TMBIM1Q969X1 311 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 RAD51AP1Q96B01 352 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 FXYD5Q96DB9 178 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 PPP1R36Q96LQ0 422 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 FOPNLQ96NB1 174 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 DERL3Q96Q80 235 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 OR7D2Q96RA2 312 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 RTBDNQ9BSG5 229 aaPredicted RBP1.92□□□□□ -2.1
HERC4-215ENST00000515753 ZNF436Q9C0F3 470 aaPredicted RBP1.92□□□□□ -2.1
HERC4-215ENST00000515753 EIF5A2Q9GZV4 153 aaKnown RBP1.92□□□□□ -2.1
HERC4-215ENST00000515753 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.92□□□□□ -2.1
HERC4-215ENST00000515753 C14orf105Q9NVL8 296 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 SLC23A2Q9UGH3 650 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 LSM5Q9Y4Y9 91 aaKnown RBP1.92□□□□□ -2.1
HERC4-215ENST00000515753 ZNF706Q9Y5V0 76 aaPredicted RBP1.92□□□□□ -2.1
HERC4-215ENST00000515753 ALG5Q9Y673 324 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 ASCC3Q8N3C0 2202 aaKnown RBP1.92□□□□□ -2.1
HERC4-215ENST00000515753 ANK1P16157 1881 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 CNOT1A5YKK6 2376 aaKnown RBP1.92□□□□□ -2.1
HERC4-215ENST00000515753 SPTBN2O15020 2390 aa1.92□□□□□ -2.1
HERC4-215ENST00000515753 CITO14578 2027 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 DOCK6Q96HP0 2047 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 IGHV1-45A0A0A0MS14 117 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 F5H5P2 479 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 H3BSA7 217 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 ISLRO14498 428 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 OR5F1O95221 314 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 CXorf1O96002 111 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 IL6P05231 212 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 ATP5G1P05496 136 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 HLA-DQB2P05538 268 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 CRYBA1P05813 215 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 OR4A8P0C604 315 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 KDELR1P24390 212 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 CNTFRP26992 372 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 TCL1AP56279 114 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 OR4D2P58180 307 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 VBP1P61758 197 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 SLC35A2P78381 396 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 OR2F1Q13607 317 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 BATFQ16520 125 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 TMEM241Q24JQ0 296 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 C1orf195Q5TG92 126 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 SPATA31B1PQ5VZV4 182 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 NCBP2-AS2Q69YL0 99 aa1.91□□□□□ -2.1
HERC4-215ENST00000515753 RASSF6Q6ZTQ3 369 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms