RNA–Protein interactions for RNA: ENST00000515460.5

NUP54-218, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-218ENST00000515460 MUC15Q8N387 334 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 RPRMLQ8N4K4 120 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 DEFB125Q8N687 156 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 TMEM217Q8N7C4 229 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 LRRC75AQ8NAA5 344 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 NFAM1Q8NET5 270 aaPredicted RBP4.54□□□□□ -1.68
NUP54-218ENST00000515460 OR52R1Q8NGF1 315 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 OR2AE1Q8NHA4 323 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 MFSD8Q8NHS3 518 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 SLC25A40Q8TBP6 338 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 MARCH1Q8TCQ1 289 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 DAZLQ92904 295 aaKnown RBP4.54□□□□□ -1.68
NUP54-218ENST00000515460 PIGTQ969N2 578 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 DDIT4LQ96D03 193 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 ZMYND19Q96E35 227 aaPredicted RBP4.54□□□□□ -1.68
NUP54-218ENST00000515460 SDSLQ96GA7 329 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 TNFRSF13CQ96RJ3 184 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 FEVQ99581 238 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 ASCL2Q99929 193 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 SCRT1Q9BWW7 348 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 NMES1Q9C002 83 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 MAP1LC3BQ9GZQ8 125 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 EIF5A2Q9GZV4 153 aaKnown RBP4.54□□□□□ -1.68
NUP54-218ENST00000515460 GTSF1LQ9H1H1 148 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 HINT3Q9NQE9 182 aaKnown RBP4.54□□□□□ -1.68
NUP54-218ENST00000515460 KCNIP1Q9NZI2 227 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 C19orf25Q9UFG5 118 aaPredicted RBP4.54□□□□□ -1.68
NUP54-218ENST00000515460 DAPP1Q9UN19 280 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 MRPS33Q9Y291 106 aaKnown RBP4.54□□□□□ -1.68
NUP54-218ENST00000515460 PAM16Q9Y3D7 125 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 RNF115Q9Y4L5 304 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 DNAJC15Q9Y5T4 150 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 SACSQ9NZJ4 4579 aa4.54□□□□□ -1.68
NUP54-218ENST00000515460 FER1L5A0AVI2 2057 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 CMYA5Q8N3K9 4069 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 DYNC2H1Q8NCM8 4307 aaKnown RBP4.53□□□□□ -1.68
NUP54-218ENST00000515460 BORCS7-ASMTA0A0B4J1R7 106 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 A0A1B0GTH9 108 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 GAGE10A6NGK3 116 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 GLOD5A6NK44 160 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 ANKRD30BLA7E2S9 258 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 TAX1BP3O14907 124 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 DEGS1O15121 323 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 SYNGR3O43761 229 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 HYPMO75409 117 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 UPK3AO75631 287 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 DIRAS1O95057 198 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 SEC11BP0C7V7 166 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 SLC6A6P31641 620 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 CNN1P51911 297 aaKnown RBP4.53□□□□□ -1.68
NUP54-218ENST00000515460 UFM1P61960 85 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 RPS15AP62244 130 aaKnown RBP4.53□□□□□ -1.68
NUP54-218ENST00000515460 LCN6P62502 163 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 PSG5Q15238 335 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 TAF13Q15543 124 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 PMCHL1Q16048 86 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 C2orf68Q2NKX9 166 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 TDRG1Q3Y452 100 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 SPATA45Q537H7 98 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 TP53I3Q53FA7 332 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 ACTL10Q5JWF8 245 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 CPTPQ5TA50 214 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 WDR25Q64LD2 544 aaPredicted RBP4.53□□□□□ -1.68
NUP54-218ENST00000515460 UNQ6126/PRO20091Q6UXV3 157 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 MOB1BQ7L9L4 216 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 TSEN54Q7Z6J9 526 aaKnown RBP4.53□□□□□ -1.68
NUP54-218ENST00000515460 ZNF101Q8IZC7 436 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 LRRC75A-AS1Q8N1F1 130 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 TMEM178AQ8NBL3 297 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 OR52B4Q8NGK2 314 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 OR13G1Q8NGZ3 307 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 FAM57AQ8TBR7 257 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 PPP1R1CQ8WVI7 109 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 NEUROG1Q92886 237 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 VSTM2LQ96N03 204 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 ZNF681Q96N22 645 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 ZFP3Q96NJ6 502 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 CABLES2Q9BTV7 478 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 ABHD6Q9BV23 337 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 ATG10Q9H0Y0 220 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 LPAR5Q9H1C0 372 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 Q9N2K0 584 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 ARL15Q9NXU5 204 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 FBXL17Q9UF56 701 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 SLC7A7Q9UM01 511 aa4.53□□□□□ -1.68
NUP54-218ENST00000515460 LOC102724200A0A096LPH7 203 aaPredicted RBP4.52□□□□□ -1.69
NUP54-218ENST00000515460 hADV38S2A0JD32 116 aa4.52□□□□□ -1.69
NUP54-218ENST00000515460 SMIM9A6NGZ8 99 aa4.52□□□□□ -1.69
NUP54-218ENST00000515460 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.52□□□□□ -1.69
NUP54-218ENST00000515460 C15orf65H3BRN8 121 aa4.52□□□□□ -1.69
NUP54-218ENST00000515460 K7EP34 96 aa4.52□□□□□ -1.69
NUP54-218ENST00000515460 M0R1X1 148 aa4.52□□□□□ -1.69
NUP54-218ENST00000515460 SPRY3O43610 288 aa4.52□□□□□ -1.69
NUP54-218ENST00000515460 TBX6O95947 436 aaPredicted RBP4.52□□□□□ -1.69
NUP54-218ENST00000515460 ISG15P05161 165 aa4.52□□□□□ -1.69
NUP54-218ENST00000515460 REG1AP05451 166 aa4.52□□□□□ -1.69
NUP54-218ENST00000515460 AKAIN1P0CW23 69 aa4.52□□□□□ -1.69
NUP54-218ENST00000515460 PPIBP23284 216 aaKnown RBP4.52□□□□□ -1.69
NUP54-218ENST00000515460 HOXD3P31249 432 aaPredicted RBP4.52□□□□□ -1.69
NUP54-218ENST00000515460 KIR2DS4P43632 304 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms