RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 DISP1Q96F81 1524 aa1.55□□□□□ -2.16
HMGCS1-207ENST00000514610 TMEM269A0A1B0GVZ9 245 aa1.54□□□□□ -2.16
HMGCS1-207ENST00000514610 CXCR6O00574 342 aa1.54□□□□□ -2.16
HMGCS1-207ENST00000514610 DEXIO95424 95 aa1.54□□□□□ -2.16
HMGCS1-207ENST00000514610 APOEP02649 317 aa1.54□□□□□ -2.16
HMGCS1-207ENST00000514610 TFPTP0C1Z6 253 aa1.54□□□□□ -2.16
HMGCS1-207ENST00000514610 CCL5P13501 91 aa1.54□□□□□ -2.16
HMGCS1-207ENST00000514610 RPL12P30050 165 aaKnown RBP1.54□□□□□ -2.16
HMGCS1-207ENST00000514610 SLCO1A2P46721 670 aa1.54□□□□□ -2.16
HMGCS1-207ENST00000514610 CDKL4Q5MAI5 379 aa1.54□□□□□ -2.16
HMGCS1-207ENST00000514610 FAM201AQ5SY85 155 aa1.54□□□□□ -2.16
HMGCS1-207ENST00000514610 JOSD2Q8TAC2 188 aa1.54□□□□□ -2.16
HMGCS1-207ENST00000514610 FGFR1OP2Q9NVK5 253 aa1.54□□□□□ -2.16
HMGCS1-207ENST00000514610 ABCC11Q96J66 1382 aa1.54□□□□□ -2.16
HMGCS1-207ENST00000514610 A0A0J9YW62 118 aa1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 H3BT86 120 aa1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 NAPSAO96009 420 aa1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 LGALS1P09382 135 aaKnown RBP1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 RPS12P25398 132 aaKnown RBP1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 RPL28P46779 137 aaKnown RBP1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 TPI1P60174 286 aa1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 TNFAIP6P98066 277 aaPredicted RBP1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 C1orf195Q5TG92 126 aa1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 FAM78BQ5VT40 261 aa1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 ZNF705AQ6ZN79 300 aaPredicted RBP1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 DEFB119Q8N690 84 aa1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 PIGXQ8TBF5 258 aa1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 HELZ2Q9BYK8 2649 aaKnown RBP1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 USE1Q9NZ43 259 aa1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 MED13Q9UHV7 2174 aa1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 PRELID1Q9Y255 219 aa1.53□□□□□ -2.16
HMGCS1-207ENST00000514610 FREM1Q5H8C1 2179 aa1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 DOCK5Q9H7D0 1870 aa1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 FBN3Q75N90 2809 aa1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 IGHV1-18A0A0C4DH31 117 aa1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 IGKV2-29A2NJV5 120 aaPredicted RBP1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 C21orf140B9A014 251 aa1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 LRRN3E7EW58 273 aa1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 PLA2G10O15496 165 aa1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 NSA2O95478 260 aaKnown RBP1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 ALDH3A1P30838 453 aa1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 MAP2K4P45985 399 aa1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 RPL30P62888 115 aaKnown RBP1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 TNFAIP8L3Q5GJ75 292 aa1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 OGFRL1Q5TC84 451 aaPredicted RBP1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 HIST2H3AQ71DI3 136 aa1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 KTN1-AS1Q86SY8 53 aa1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 TESCQ96BS2 214 aa1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 PXMP4Q9Y6I8 212 aa1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 HEATR5BQ9P2D3 2071 aa1.52□□□□□ -2.17
HMGCS1-207ENST00000514610 BRWD1Q9NSI6 2320 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 NUP160Q12769 1436 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 EVC2Q86UK5 1308 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 TRAV7A0A075B6U4 112 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 A0A1B0GW54 56 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 EVPLLA8MZ36 301 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 H7C2G1 150 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 LST1O00453 97 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 SLC16A4O15374 487 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 MAGEA12P43365 314 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 AQP4P55087 323 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 RAB14P61106 215 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 ACSM3Q53FZ2 586 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 TMEM42Q69YG0 159 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 C5orf46Q6UWT4 87 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 LRRN1Q6UXK5 716 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 C10orf126Q8N4M7 172 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 SLC7A6Q92536 515 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 HSPB9Q9BQS6 159 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 NAA38Q9BRA0 125 aaKnown RBP1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 GPR84Q9NQS5 396 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 C8orf4Q9NR00 106 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 FKBP14Q9NWM8 211 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 TIMM9Q9Y5J7 89 aa1.51□□□□□ -2.17
HMGCS1-207ENST00000514610 PSMB8P28062 276 aa1.5□□□□□ -2.17
HMGCS1-207ENST00000514610 AP2S1P53680 142 aaPredicted RBP1.5□□□□□ -2.17
HMGCS1-207ENST00000514610 AP1S1P61966 158 aa1.5□□□□□ -2.17
HMGCS1-207ENST00000514610 SLC22A24Q8N4F4 322 aa1.5□□□□□ -2.17
HMGCS1-207ENST00000514610 RAB8BQ92930 207 aa1.5□□□□□ -2.17
HMGCS1-207ENST00000514610 TMA16Q96EY4 203 aaKnown RBP1.5□□□□□ -2.17
HMGCS1-207ENST00000514610 DIRAS2Q96HU8 199 aa1.5□□□□□ -2.17
HMGCS1-207ENST00000514610 Q96M85 177 aa1.5□□□□□ -2.17
HMGCS1-207ENST00000514610 DOHHQ9BU89 302 aa1.5□□□□□ -2.17
HMGCS1-207ENST00000514610 C3orf18Q9UK00 162 aa1.5□□□□□ -2.17
HMGCS1-207ENST00000514610 TRAV38-1A0A0B4J264 116 aa1.49□□□□□ -2.17
HMGCS1-207ENST00000514610 A0A0D9SEW6 157 aa1.49□□□□□ -2.17
HMGCS1-207ENST00000514610 OR4C45A6NMZ5 311 aa1.49□□□□□ -2.17
HMGCS1-207ENST00000514610 HMSDA8MTL9 139 aa1.49□□□□□ -2.17
HMGCS1-207ENST00000514610 CIAO1O76071 339 aa1.49□□□□□ -2.17
HMGCS1-207ENST00000514610 KRT75O95678 551 aa1.49□□□□□ -2.17
HMGCS1-207ENST00000514610 GPX2P18283 190 aa1.49□□□□□ -2.17
HMGCS1-207ENST00000514610 MYL12AP19105 171 aa1.49□□□□□ -2.17
HMGCS1-207ENST00000514610 CCR7P32248 378 aa1.49□□□□□ -2.17
HMGCS1-207ENST00000514610 AKR1C1Q04828 323 aa1.49□□□□□ -2.17
HMGCS1-207ENST00000514610 CD200R1LQ6Q8B3 271 aa1.49□□□□□ -2.17
HMGCS1-207ENST00000514610 SSX8Q7RTT4 187 aa1.49□□□□□ -2.17
HMGCS1-207ENST00000514610 ZNF550Q7Z398 422 aa1.49□□□□□ -2.17
HMGCS1-207ENST00000514610 OR51I1Q9H343 314 aa1.49□□□□□ -2.17
HMGCS1-207ENST00000514610 OR51I2Q9H344 312 aa1.49□□□□□ -2.17
HMGCS1-207ENST00000514610 XPNPEP1Q9NQW7 623 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms