RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 OR2A7Q96R45 310 aa15.98■□□□□ 0.15
USP53-208ENST00000514305 RAMP3O60896 148 aa15.97■□□□□ 0.15
USP53-208ENST00000514305 HLA-DRB1P01911 266 aa15.97■□□□□ 0.15
USP53-208ENST00000514305 UCP1P25874 307 aa15.97■□□□□ 0.15
USP53-208ENST00000514305 BTCP35070 178 aa15.97■□□□□ 0.15
USP53-208ENST00000514305 RAB25P57735 213 aa15.97■□□□□ 0.15
USP53-208ENST00000514305 DCTN2Q13561 401 aaKnown RBP15.97■□□□□ 0.15
USP53-208ENST00000514305 POU2AF1Q16633 256 aa15.97■□□□□ 0.15
USP53-208ENST00000514305 PLET1Q6UQ28 207 aa15.97■□□□□ 0.15
USP53-208ENST00000514305 ZNF695Q8IW36 515 aa15.97■□□□□ 0.15
USP53-208ENST00000514305 MMD2Q8IY49 270 aa15.97■□□□□ 0.15
USP53-208ENST00000514305 R3HDM4Q96D70 268 aa15.97■□□□□ 0.15
USP53-208ENST00000514305 ALX4Q9H161 411 aaPredicted RBP15.97■□□□□ 0.15
USP53-208ENST00000514305 FBXL15Q9H469 300 aa15.97■□□□□ 0.15
USP53-208ENST00000514305 SIGLEC9Q9Y336 463 aa15.97■□□□□ 0.15
USP53-208ENST00000514305 S1PR2O95136 353 aa15.96■□□□□ 0.15
USP53-208ENST00000514305 TSPAN15O95858 294 aa15.96■□□□□ 0.15
USP53-208ENST00000514305 OR5AC1P0C628 307 aa15.96■□□□□ 0.15
USP53-208ENST00000514305 VAMP1P23763 118 aa15.96■□□□□ 0.15
USP53-208ENST00000514305 CNTFRP26992 372 aa15.96■□□□□ 0.15
USP53-208ENST00000514305 BLCAPP62952 87 aa15.96■□□□□ 0.15
USP53-208ENST00000514305 IFITM3Q01628 133 aa15.96■□□□□ 0.15
USP53-208ENST00000514305 SLC35E3Q7Z769 313 aa15.96■□□□□ 0.15
USP53-208ENST00000514305 ADAD2Q8NCV1 583 aaKnown RBP15.96■□□□□ 0.15
USP53-208ENST00000514305 DUSP18Q8NEJ0 188 aa15.96■□□□□ 0.15
USP53-208ENST00000514305 RNASE11Q8TAA1 199 aaKnown RBP15.96■□□□□ 0.15
USP53-208ENST00000514305 FAM110DQ8TAY7 271 aaPredicted RBP15.96■□□□□ 0.15
USP53-208ENST00000514305 IL22RA2Q969J5 263 aa15.96■□□□□ 0.15
USP53-208ENST00000514305 RRNAD1Q96FB5 475 aaKnown RBP15.96■□□□□ 0.15
USP53-208ENST00000514305 RITA1Q96K30 269 aa15.96■□□□□ 0.15
USP53-208ENST00000514305 GON7Q9BXV9 100 aa15.96■□□□□ 0.15
USP53-208ENST00000514305 TMEM222Q9H0R3 208 aa15.96■□□□□ 0.15
USP53-208ENST00000514305 C20orf85Q9H1P6 137 aa15.96■□□□□ 0.15
USP53-208ENST00000514305 BET1LQ9NYM9 111 aa15.96■□□□□ 0.15
USP53-208ENST00000514305 MARCH11A6NNE9 402 aa15.95■□□□□ 0.14
USP53-208ENST00000514305 SRRM4A7MD48 611 aaKnown RBP15.95■□□□□ 0.14
USP53-208ENST00000514305 ARPC1BO15143 372 aaKnown RBP15.95■□□□□ 0.14
USP53-208ENST00000514305 SNAPC5O75971 98 aa15.95■□□□□ 0.14
USP53-208ENST00000514305 IGLV2-23P01705 113 aa15.95■□□□□ 0.14
USP53-208ENST00000514305 H2AFB2P0C5Z0 115 aa15.95■□□□□ 0.14
USP53-208ENST00000514305 SAA1P0DJI8 122 aaPredicted RBP15.95■□□□□ 0.14
USP53-208ENST00000514305 MAS1LP35410 378 aa15.95■□□□□ 0.14
USP53-208ENST00000514305 VDAC2P45880 294 aaPredicted RBP15.95■□□□□ 0.14
USP53-208ENST00000514305 BRWD1-AS2P59051 145 aa15.95■□□□□ 0.14
USP53-208ENST00000514305 ZNF585BQ52M93 769 aa15.95■□□□□ 0.14
USP53-208ENST00000514305 ZNF562Q6V9R5 426 aa15.95■□□□□ 0.14
USP53-208ENST00000514305 LGI3Q8N145 548 aa15.95■□□□□ 0.14
USP53-208ENST00000514305 Q8N2B8 174 aa15.95■□□□□ 0.14
USP53-208ENST00000514305 TP53RKQ96S44 253 aa15.95■□□□□ 0.14
USP53-208ENST00000514305 TGP01266 2768 aa15.94■□□□□ 0.14
USP53-208ENST00000514305 CNIH1O95406 144 aa15.94■□□□□ 0.14
USP53-208ENST00000514305 CDS2O95674 445 aa15.94■□□□□ 0.14
USP53-208ENST00000514305 KRASP01116 189 aa15.94■□□□□ 0.14
USP53-208ENST00000514305 IGHG2P01859 326 aa15.94■□□□□ 0.14
USP53-208ENST00000514305 FGF2P09038 288 aa15.94■□□□□ 0.14
USP53-208ENST00000514305 AKR1C2P52895 323 aa15.94■□□□□ 0.14
USP53-208ENST00000514305 TMEM267Q0VDI3 215 aaPredicted RBP15.94■□□□□ 0.14
USP53-208ENST00000514305 SP6Q3SY56 376 aa15.94■□□□□ 0.14
USP53-208ENST00000514305 C4orf46Q504U0 113 aa15.94■□□□□ 0.14
USP53-208ENST00000514305 SSX9Q7RTT3 188 aa15.94■□□□□ 0.14
USP53-208ENST00000514305 H2BFWTQ7Z2G1 175 aa15.94■□□□□ 0.14
USP53-208ENST00000514305 FAM219AQ8IW50 185 aa15.94■□□□□ 0.14
USP53-208ENST00000514305 RBPMSQ93062 196 aaKnown RBP15.94■□□□□ 0.14
USP53-208ENST00000514305 TMEM230Q96A57 120 aa15.94■□□□□ 0.14
USP53-208ENST00000514305 NUDT15Q9NV35 164 aa15.94■□□□□ 0.14
USP53-208ENST00000514305 FKBP11Q9NYL4 201 aa15.94■□□□□ 0.14
USP53-208ENST00000514305 NOTCH1P46531 2555 aa15.94■□□□□ 0.14
USP53-208ENST00000514305 AP4M1O00189 453 aa15.93■□□□□ 0.14
USP53-208ENST00000514305 SFT2D2O95562 160 aa15.93■□□□□ 0.14
USP53-208ENST00000514305 PTTG1O95997 202 aa15.93■□□□□ 0.14
USP53-208ENST00000514305 AMY1AP04745 511 aa15.93■□□□□ 0.14
USP53-208ENST00000514305 CRYGBP07316 175 aa15.93■□□□□ 0.14
USP53-208ENST00000514305 VSIG10L2P0DP72 767 aa15.93■□□□□ 0.14
USP53-208ENST00000514305 FBLN7Q53RD9 439 aa15.93■□□□□ 0.14
USP53-208ENST00000514305 PUSL1Q8N0Z8 303 aaKnown RBP15.93■□□□□ 0.14
USP53-208ENST00000514305 COQ8AQ8NI60 647 aa15.93■□□□□ 0.14
USP53-208ENST00000514305 TMEM167AQ8TBQ9 72 aa15.93■□□□□ 0.14
USP53-208ENST00000514305 GLYATL2Q8WU03 294 aa15.93■□□□□ 0.14
USP53-208ENST00000514305 CLCC1Q96S66 551 aa15.93■□□□□ 0.14
USP53-208ENST00000514305 ZNF702PQ9H963 129 aa15.93■□□□□ 0.14
USP53-208ENST00000514305 CACFD1Q9UGQ2 172 aa15.93■□□□□ 0.14
USP53-208ENST00000514305 TRAV6A0A075B6T7 132 aa15.92■□□□□ 0.14
USP53-208ENST00000514305 DUXBA0A1W2PPF3 345 aa15.92■□□□□ 0.14
USP53-208ENST00000514305 KBTBD11O94819 623 aa15.92■□□□□ 0.14
USP53-208ENST00000514305 HLA-AP01891 365 aaKnown RBP15.92■□□□□ 0.14
USP53-208ENST00000514305 OR4E1P0C645 316 aa15.92■□□□□ 0.14
USP53-208ENST00000514305 G6PCP35575 357 aa15.92■□□□□ 0.14
USP53-208ENST00000514305 TMEM187Q14656 261 aa15.92■□□□□ 0.14
USP53-208ENST00000514305 OR4A47Q6IF82 309 aa15.92■□□□□ 0.14
USP53-208ENST00000514305 ABHD5Q8WTS1 349 aa15.92■□□□□ 0.14
USP53-208ENST00000514305 CHPT1Q8WUD6 406 aa15.92■□□□□ 0.14
USP53-208ENST00000514305 TMEM56Q96MV1 263 aa15.92■□□□□ 0.14
USP53-208ENST00000514305 OR51J1Q9H342 316 aa15.92■□□□□ 0.14
USP53-208ENST00000514305 GPN1Q9HCN4 374 aaPredicted RBP15.92■□□□□ 0.14
USP53-208ENST00000514305 TMEM140Q9NV12 185 aa15.92■□□□□ 0.14
USP53-208ENST00000514305 FLVCR2Q9UPI3 526 aa15.92■□□□□ 0.14
USP53-208ENST00000514305 TMEM56-RWDD3S4R434 201 aa15.92■□□□□ 0.14
USP53-208ENST00000514305 PRAF2O60831 178 aa15.91■□□□□ 0.14
USP53-208ENST00000514305 DHFRP00374 187 aa15.91■□□□□ 0.14
USP53-208ENST00000514305 CA2P00918 260 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms