RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 OPN3Q9H1Y3 402 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-209ENST00000513761 IL36BQ9NZH7 164 aa6.57□□□□□ -1.36
CLCN3-209ENST00000513761 IGHV2-70P01814 119 aa6.57□□□□□ -1.36
CLCN3-209ENST00000513761 FOXA3P55318 350 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-209ENST00000513761 RELBQ01201 579 aa6.57□□□□□ -1.36
CLCN3-209ENST00000513761 ZNF441Q8N8Z8 693 aa6.57□□□□□ -1.36
CLCN3-209ENST00000513761 C5orf17Q8NAS9 161 aa6.57□□□□□ -1.36
CLCN3-209ENST00000513761 OR1L8Q8NGR8 309 aa6.57□□□□□ -1.36
CLCN3-209ENST00000513761 FGFBP3Q8TAT2 258 aa6.57□□□□□ -1.36
CLCN3-209ENST00000513761 CEACAM18A8MTB9 384 aa6.57□□□□□ -1.36
CLCN3-209ENST00000513761 CD33P20138 364 aa6.57□□□□□ -1.36
CLCN3-209ENST00000513761 MPV17P39210 176 aa6.57□□□□□ -1.36
CLCN3-209ENST00000513761 KRTCAP3Q53RY4 240 aa6.57□□□□□ -1.36
CLCN3-209ENST00000513761 DCAF10Q5QP82 559 aa6.57□□□□□ -1.36
CLCN3-209ENST00000513761 OR8B2Q96RD0 313 aa6.57□□□□□ -1.36
CLCN3-209ENST00000513761 NABP2Q9BQ15 211 aa6.57□□□□□ -1.36
CLCN3-209ENST00000513761 CHRNA10Q9GZZ6 450 aa6.57□□□□□ -1.36
CLCN3-209ENST00000513761 SEBOXQ9HB31 216 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-209ENST00000513761 ASCL3Q9NQ33 180 aa6.57□□□□□ -1.36
CLCN3-209ENST00000513761 SPTA1P02549 2419 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 CORTO00230 105 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 RAMP3O60896 148 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 NMUP48645 174 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 RPL39P5Q59GN2 51 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 ZNF664Q8N3J9 261 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 PERPQ96FX8 193 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 TMEM106BQ9NUM4 274 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 ZNF785A8K8V0 405 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 IL6RP08887 468 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-209ENST00000513761 MAS1LP35410 378 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 SLC25A53Q5H9E4 307 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 INO80CQ6PI98 192 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-209ENST00000513761 VSTM2AQ8TAG5 236 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 ZDBF2Q9HCK1 2354 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 PGPA6NDG6 321 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 GAGE10A6NGK3 116 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 NCBP2LA6PVI3 153 aaKnown RBP6.56□□□□□ -1.36
CLCN3-209ENST00000513761 CELA3AP09093 270 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 COMPP49747 757 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-209ENST00000513761 RIGQ13278 110 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 TMEM97Q5BJF2 176 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 C10orf91Q5T1B1 145 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 DNM1P46Q6ZS02 220 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 FADS6Q8N9I5 356 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 RPEQ96AT9 228 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 REPIN1Q9BWE0 567 aaKnown RBP6.56□□□□□ -1.36
CLCN3-209ENST00000513761 MS4A5Q9H3V2 200 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 PNRC2Q9NPJ4 139 aaKnown RBP6.56□□□□□ -1.36
CLCN3-209ENST00000513761 TRAV17A0A0B4J275 112 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 A8MWL6 223 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 PRRG2O14669 202 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 MGST3O14880 152 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 NUTF2P61970 127 aaKnown RBP6.56□□□□□ -1.36
CLCN3-209ENST00000513761 BHLHA15Q7RTS1 189 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-209ENST00000513761 PLPPR1Q8TBJ4 325 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 RAB37Q96AX2 223 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 DCTN5Q9BTE1 182 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 C1QTNF5Q9BXJ0 243 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 A6NDN8 102 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 HSPE1P61604 102 aaKnown RBP6.56□□□□□ -1.36
CLCN3-209ENST00000513761 TMEM256Q8N2U0 113 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 FAM222BQ8WU58 562 aa6.56□□□□□ -1.36
CLCN3-209ENST00000513761 AMMECR1Q9Y4X0 333 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-209ENST00000513761 DIDO1Q9BTC0 2240 aaKnown RBP6.55□□□□□ -1.36
CLCN3-209ENST00000513761 A0A1B0GW64 132 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 E9PLN8 166 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 CA2P00918 260 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 CTSSP25774 331 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 HCP5Q6MZN7 132 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 SLC25A34Q6PIV7 304 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 KLF14Q8TD94 323 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-209ENST00000513761 MBD3L1Q8WWY6 194 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 CCL13Q99616 98 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 RNF7Q9UBF6 113 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 HELZP42694 1942 aaKnown RBP6.55□□□□□ -1.36
CLCN3-209ENST00000513761 C8orf88P0DMB2 117 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 SPSB3Q6PJ21 355 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 NEU1Q99519 415 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 DEPPQ9NTK1 212 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 TMEM242Q9NWH2 141 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 IGHV3-72A0A0B4J1Y9 119 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 FAM157AC9JC47 383 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 RPP25LQ8N5L8 163 aaKnown RBP6.55□□□□□ -1.36
CLCN3-209ENST00000513761 GTF3AQ92664 365 aaKnown RBP6.55□□□□□ -1.36
CLCN3-209ENST00000513761 RNASE7Q9H1E1 156 aaKnown RBP6.55□□□□□ -1.36
CLCN3-209ENST00000513761 DOCK9Q9BZ29 2069 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 EP400Q96L91 3159 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.55□□□□□ -1.36
CLCN3-209ENST00000513761 TFF1P04155 84 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 GZMBP10144 247 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 IGFBP2P18065 325 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 GATA2P23769 480 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-209ENST00000513761 CFPP27918 469 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 GPR6P46095 362 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-209ENST00000513761 GBGT1Q8N5D6 347 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 RBM14Q96PK6 669 aaKnown RBP6.55□□□□□ -1.36
CLCN3-209ENST00000513761 NRN1Q9NPD7 142 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 ONECUT1Q9UBC0 465 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 TRBV9A0A0B4J1U6 114 aa6.55□□□□□ -1.36
CLCN3-209ENST00000513761 TMEM177Q53S58 311 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms