RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 CMSS1Q9BQ75 279 aaKnown RBP8□□□□□ -1.13
DDX41-216ENST00000513562 ZNF436Q9C0F3 470 aaPredicted RBP8□□□□□ -1.13
DDX41-216ENST00000513562 C6orf62Q9GZU0 229 aaPredicted RBP8□□□□□ -1.13
DDX41-216ENST00000513562 HRH4Q9H3N8 390 aa8□□□□□ -1.13
DDX41-216ENST00000513562 SLC2A9Q9NRM0 540 aa8□□□□□ -1.13
DDX41-216ENST00000513562 IGLV11-55A0A075B6I3 123 aa7.99□□□□□ -1.13
DDX41-216ENST00000513562 TRBV6-7A0A0A0MS04 114 aa7.99□□□□□ -1.13
DDX41-216ENST00000513562 E7EUB6 86 aa7.99□□□□□ -1.13
DDX41-216ENST00000513562 BET1O15155 118 aa7.99□□□□□ -1.13
DDX41-216ENST00000513562 DEFB4AO15263 64 aa7.99□□□□□ -1.13
DDX41-216ENST00000513562 DIRAS3O95661 229 aa7.99□□□□□ -1.13
DDX41-216ENST00000513562 BPNT1O95861 308 aa7.99□□□□□ -1.13
DDX41-216ENST00000513562 DHFRP00374 187 aa7.99□□□□□ -1.13
DDX41-216ENST00000513562 HIST1H1BP16401 226 aaKnown RBP7.99□□□□□ -1.13
DDX41-216ENST00000513562 GPR183P32249 361 aa7.99□□□□□ -1.13
DDX41-216ENST00000513562 RPL27AP46776 148 aaKnown RBP7.99□□□□□ -1.13
DDX41-216ENST00000513562 TMEM50BP56557 158 aa7.99□□□□□ -1.13
DDX41-216ENST00000513562 IGSF11Q5DX21 431 aa7.99□□□□□ -1.13
DDX41-216ENST00000513562 APRG1Q8IVJ8 170 aa7.99□□□□□ -1.13
DDX41-216ENST00000513562 OR10J5Q8NHC4 309 aa7.99□□□□□ -1.13
DDX41-216ENST00000513562 ZNF502Q8TBZ5 544 aa7.99□□□□□ -1.13
DDX41-216ENST00000513562 CXorf58Q96LI9 332 aa7.99□□□□□ -1.13
DDX41-216ENST00000513562 URM1Q9BTM9 101 aaKnown RBP7.99□□□□□ -1.13
DDX41-216ENST00000513562 LRP1BQ9NZR2 4599 aa7.99□□□□□ -1.13
DDX41-216ENST00000513562 IGHV4-4A0A075B6R2 117 aa7.98□□□□□ -1.13
DDX41-216ENST00000513562 IGHV3-35A0A0C4DH35 117 aa7.98□□□□□ -1.13
DDX41-216ENST00000513562 CD37P11049 281 aa7.98□□□□□ -1.13
DDX41-216ENST00000513562 CELP19835 753 aa7.98□□□□□ -1.13
DDX41-216ENST00000513562 ARFRP1Q13795 201 aa7.98□□□□□ -1.13
DDX41-216ENST00000513562 ZNF124Q15973 351 aa7.98□□□□□ -1.13
DDX41-216ENST00000513562 OR4A5Q8NH83 315 aa7.98□□□□□ -1.13
DDX41-216ENST00000513562 PYDC1Q8WXC3 89 aa7.98□□□□□ -1.13
DDX41-216ENST00000513562 PHYHIPQ92561 330 aa7.98□□□□□ -1.13
DDX41-216ENST00000513562 TMEM80Q96HE8 168 aa7.98□□□□□ -1.13
DDX41-216ENST00000513562 ARHGAP5-AS1Q96IT6 56 aa7.98□□□□□ -1.13
DDX41-216ENST00000513562 PECRQ9BY49 303 aa7.98□□□□□ -1.13
DDX41-216ENST00000513562 OR51E2Q9H255 320 aa7.98□□□□□ -1.13
DDX41-216ENST00000513562 DAZ1Q9NQZ3 744 aaKnown RBP7.98□□□□□ -1.13
DDX41-216ENST00000513562 MUC4Q99102 2169 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 TGOLN2O43493 480 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 FCGR3BO75015 233 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 KBTBD11O94819 623 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 MAS1LP35410 378 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 INSL4Q14641 139 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 IRF3Q14653 427 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 PLAC9Q5JTB6 97 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 RBM48Q5RL73 367 aaKnown RBP7.97□□□□□ -1.13
DDX41-216ENST00000513562 PVRIGQ6DKI7 326 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 PLET1Q6UQ28 207 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 NR2C2APQ86WQ0 139 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 VKORC1L1Q8N0U8 176 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 POM121L12Q8N7R1 296 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 Q8NAQ8 132 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 OR6M1Q8NGM8 313 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 VSTM2AQ8TAG5 236 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 OR2A7Q96R45 310 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 DCUN1D5Q9BTE7 237 aa7.97□□□□□ -1.13
DDX41-216ENST00000513562 RBM7Q9Y580 266 aaKnown RBP7.97□□□□□ -1.13
DDX41-216ENST00000513562 TRAV10A0A0B4J240 114 aa7.96□□□□□ -1.14
DDX41-216ENST00000513562 M0R2N4 97 aa7.96□□□□□ -1.14
DDX41-216ENST00000513562 AMBPP02760 352 aa7.96□□□□□ -1.14
DDX41-216ENST00000513562 REG1AP05451 166 aa7.96□□□□□ -1.14
DDX41-216ENST00000513562 CDK1P06493 297 aa7.96□□□□□ -1.14
DDX41-216ENST00000513562 CTSDP07339 412 aaPredicted RBP7.96□□□□□ -1.14
DDX41-216ENST00000513562 FCGR3AP08637 254 aa7.96□□□□□ -1.14
DDX41-216ENST00000513562 DEFA4P12838 97 aa7.96□□□□□ -1.14
DDX41-216ENST00000513562 PSMD7P51665 324 aa7.96□□□□□ -1.14
DDX41-216ENST00000513562 LGALS9BQ3B8N2 356 aa7.96□□□□□ -1.14
DDX41-216ENST00000513562 Q6ZTC4 211 aa7.96□□□□□ -1.14
DDX41-216ENST00000513562 KCTD9Q7L273 389 aa7.96□□□□□ -1.14
DDX41-216ENST00000513562 PUSL1Q8N0Z8 303 aaKnown RBP7.96□□□□□ -1.14
DDX41-216ENST00000513562 TMEM167AQ8TBQ9 72 aa7.96□□□□□ -1.14
DDX41-216ENST00000513562 RNF126Q9BV68 326 aa7.96□□□□□ -1.14
DDX41-216ENST00000513562 MRPS7Q9Y2R9 242 aaKnown RBP7.96□□□□□ -1.14
DDX41-216ENST00000513562 EFCAB10A6NFE3 127 aa7.95□□□□□ -1.14
DDX41-216ENST00000513562 CA1P00915 261 aaPredicted RBP7.95□□□□□ -1.14
DDX41-216ENST00000513562 P0DMU3 169 aa7.95□□□□□ -1.14
DDX41-216ENST00000513562 FAM231AP0DMU4 169 aa7.95□□□□□ -1.14
DDX41-216ENST00000513562 FAM231CP0DMU5 169 aa7.95□□□□□ -1.14
DDX41-216ENST00000513562 RPA2P15927 270 aa7.95□□□□□ -1.14
DDX41-216ENST00000513562 PTBP1P26599 531 aaKnown RBP eCLIP7.95□□□□□ -1.14
DDX41-216ENST00000513562 HLA-DMBP28068 263 aa7.95□□□□□ -1.14
DDX41-216ENST00000513562 TMEM187Q14656 261 aa7.95□□□□□ -1.14
DDX41-216ENST00000513562 P2RY14Q15391 338 aa7.95□□□□□ -1.14
DDX41-216ENST00000513562 ACSM3Q53FZ2 586 aa7.95□□□□□ -1.14
DDX41-216ENST00000513562 OR2B11Q5JQS5 317 aa7.95□□□□□ -1.14
DDX41-216ENST00000513562 H1FOOQ8IZA3 346 aaPredicted RBP7.95□□□□□ -1.14
DDX41-216ENST00000513562 ZNF645Q8N7E2 425 aa7.95□□□□□ -1.14
DDX41-216ENST00000513562 GINS4Q9BRT9 223 aa7.95□□□□□ -1.14
DDX41-216ENST00000513562 C9orf16Q9BUW7 83 aa7.95□□□□□ -1.14
DDX41-216ENST00000513562 KCNK7Q9Y2U2 307 aa7.95□□□□□ -1.14
DDX41-216ENST00000513562 PRELID3BQ9Y3B1 194 aa7.95□□□□□ -1.14
DDX41-216ENST00000513562 CGB1A6NKQ9 187 aa7.94□□□□□ -1.14
DDX41-216ENST00000513562 K7EMT4 169 aa7.94□□□□□ -1.14
DDX41-216ENST00000513562 NDUFA4O00483 81 aa7.94□□□□□ -1.14
DDX41-216ENST00000513562 CDK2AP2O75956 126 aa7.94□□□□□ -1.14
DDX41-216ENST00000513562 RBMY1A1P0DJD3 496 aaKnown RBP7.94□□□□□ -1.14
DDX41-216ENST00000513562 RBMY1CP0DJD4 496 aa7.94□□□□□ -1.14
DDX41-216ENST00000513562 CMC4P56277 68 aaPredicted RBP7.94□□□□□ -1.14
DDX41-216ENST00000513562 WNT4P56705 351 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms