RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 SPNS3Q6ZMD2 512 aa7.62□□□□□ -1.19
CPNE4-210ENST00000512332 C16orf82Q7Z2V1 217 aa7.62□□□□□ -1.19
CPNE4-210ENST00000512332 HIST3H2BBQ8N257 126 aa7.62□□□□□ -1.19
CPNE4-210ENST00000512332 ZNF439Q8NDP4 499 aa7.62□□□□□ -1.19
CPNE4-210ENST00000512332 NPVFQ9HCQ7 196 aa7.62□□□□□ -1.19
CPNE4-210ENST00000512332 MIOXQ9UGB7 285 aa7.62□□□□□ -1.19
CPNE4-210ENST00000512332 TCF19Q9Y242 345 aa7.62□□□□□ -1.19
CPNE4-210ENST00000512332 HCFC1P51610 2035 aa7.61□□□□□ -1.19
CPNE4-210ENST00000512332 ZNF729A6NN14 1252 aaPredicted RBP7.61□□□□□ -1.19
CPNE4-210ENST00000512332 A8MXE2 369 aa7.61□□□□□ -1.19
CPNE4-210ENST00000512332 F6UZH7 168 aa7.61□□□□□ -1.19
CPNE4-210ENST00000512332 H7BYZ3 331 aa7.61□□□□□ -1.19
CPNE4-210ENST00000512332 IGHV1-46P01743 117 aa7.61□□□□□ -1.19
CPNE4-210ENST00000512332 IL6RP08887 468 aaPredicted RBP7.61□□□□□ -1.19
CPNE4-210ENST00000512332 STAG3L2P0CL84 134 aa7.61□□□□□ -1.19
CPNE4-210ENST00000512332 STAG3L3P0CL85 134 aa7.61□□□□□ -1.19
CPNE4-210ENST00000512332 HSPE1P61604 102 aaKnown RBP7.61□□□□□ -1.19
CPNE4-210ENST00000512332 RPS16P62249 146 aaKnown RBP7.61□□□□□ -1.19
CPNE4-210ENST00000512332 ZNF788Q6ZQV5 615 aa7.61□□□□□ -1.19
CPNE4-210ENST00000512332 C1orf229Q6ZS94 237 aaPredicted RBP7.61□□□□□ -1.19
CPNE4-210ENST00000512332 SSX9Q7RTT3 188 aa7.61□□□□□ -1.19
CPNE4-210ENST00000512332 NUP37Q8NFH4 326 aa7.61□□□□□ -1.19
CPNE4-210ENST00000512332 GATAD1Q8WUU5 269 aa7.61□□□□□ -1.19
CPNE4-210ENST00000512332 TMEM170AQ8WVE7 144 aa7.61□□□□□ -1.19
CPNE4-210ENST00000512332 RHOVQ96L33 236 aa7.61□□□□□ -1.19
CPNE4-210ENST00000512332 OR5B12Q96R08 314 aa7.61□□□□□ -1.19
CPNE4-210ENST00000512332 PITPNC1Q9UKF7 332 aa7.61□□□□□ -1.19
CPNE4-210ENST00000512332 EP300Q09472 2414 aaPredicted RBP7.61□□□□□ -1.19
CPNE4-210ENST00000512332 SAA2-SAA4A0A096LPE2 208 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 TRAV3A0A0B4J244 114 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 SLC31A2O15432 143 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 HRASP01112 189 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 IGHV2-70P01814 119 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 SAA2P0DJI9 122 aaPredicted RBP7.6□□□□□ -1.19
CPNE4-210ENST00000512332 TNFSF4P23510 183 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 NPPCP23582 126 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 SRP14P37108 136 aaKnown RBP7.6□□□□□ -1.19
CPNE4-210ENST00000512332 ATP5IP56385 69 aaPredicted RBP7.6□□□□□ -1.19
CPNE4-210ENST00000512332 TNFAIP6P98066 277 aaPredicted RBP7.6□□□□□ -1.19
CPNE4-210ENST00000512332 TEX36Q5VZQ5 186 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 VKORC1L1Q8N0U8 176 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 RPRMLQ8N4K4 120 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 RBMXL3Q8N7X1 1067 aaKnown RBP7.6□□□□□ -1.19
CPNE4-210ENST00000512332 FAM57AQ8TBR7 257 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 PLPPR2Q96GM1 343 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 MGST2Q99735 147 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 GGTLC1Q9BX51 225 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 MS4A5Q9H3V2 200 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 ZNF257Q9Y2Q1 563 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 PRRC2CQ9Y520 2896 aaKnown RBP7.6□□□□□ -1.19
CPNE4-210ENST00000512332 GGCTO75223 188 aaKnown RBP7.6□□□□□ -1.19
CPNE4-210ENST00000512332 CXorf1O96002 111 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 GYPAP02724 150 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 TYMSP04818 313 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 SOD3P08294 240 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 CD40P25942 277 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 CADP27708 2225 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 PLA2G5P39877 138 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 GALR1P47211 349 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 FAM3BP58499 235 aaPredicted RBP7.6□□□□□ -1.19
CPNE4-210ENST00000512332 MRPS11P82912 194 aaKnown RBP7.6□□□□□ -1.19
CPNE4-210ENST00000512332 PYY3Q5JQD4 70 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 COA6Q5JTJ3 125 aaKnown RBP7.6□□□□□ -1.19
CPNE4-210ENST00000512332 OR4A47Q6IF82 309 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 VHLLQ6RSH7 139 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 ABHD12Q8N2K0 398 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 ZNF383Q8NA42 475 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 DSCAML1Q8TD84 2053 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 BTF3L4Q96K17 158 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 GAFA1Q96PS6 74 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 IMMP2LQ96T52 175 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 CHODLQ9H9P2 273 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 IDI2-AS1Q9NZ38 188 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 PRNDQ9UKY0 176 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 DMRT1Q9Y5R6 373 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 PXMP4Q9Y6I8 212 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 TTC28Q96AY4 2481 aa7.6□□□□□ -1.19
CPNE4-210ENST00000512332 DSCAMO60469 2012 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 TRAV38-1A0A0B4J264 116 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 LINC00587B1AMM8 73 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 PPP5D1E7EU14 171 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 RPL29P47914 159 aaKnown RBP7.59□□□□□ -1.19
CPNE4-210ENST00000512332 LCN2P80188 198 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 RAB31Q13636 194 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 GCSAMLQ5JQS6 135 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 SSX8Q7RTT4 187 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 TCF23Q7RTU1 214 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 LINC01551Q86U37 167 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 SLC24A4Q8NFF2 622 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 OR4X1Q8NH49 305 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 C1orf159Q96HA4 380 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 TMEM204Q9BSN7 226 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 ZNF318Q5VUA4 2279 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 SVILO95425 2214 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 NPY1RP25929 384 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 GNB1P62873 340 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 FAM27E3Q08E93 113 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 FAM201AQ5SY85 155 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 ALKBH2Q6NS38 261 aa7.59□□□□□ -1.19
CPNE4-210ENST00000512332 TEPPQ6URK8 271 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms