RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 ZNF382Q96SR6 550 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 PDCD10Q9BUL8 212 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 UBQLN4Q9NRR5 601 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 ACER3Q9NUN7 267 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 MRPL27Q9P0M9 148 aaKnown RBP2.62□□□□□ -1.99
NUP54-209ENST00000510569 SPRR3Q9UBC9 169 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 SHPKQ9UHJ6 478 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 HSPB8Q9UJY1 196 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 GNG8Q9UK08 70 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 RPL26L1Q9UNX3 145 aaKnown RBP2.62□□□□□ -1.99
NUP54-209ENST00000510569 HDGFL3Q9Y3E1 203 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 ZSWIM8A7E2V4 1837 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 MGAMO43451 1857 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 TRAV36DV7A0A075B6V5 113 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 IGLV1-36A0A0B4J1U3 117 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 TRAV8-2A0A0B4J237 113 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 IGHV3OR16-9A0A0B4J2B5 98 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 A0A0J9YXY3 114 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 hADV38S2A0JD32 116 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 TMEM189A5PLL7 270 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 TRAPPC13A5PLN9 417 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 NKX2-6A6NCS4 301 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 FAM183AA6NL82 134 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 K7EQS6 105 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 OR2A4O95047 310 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 C6orf47O95873 294 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 SHBGP04278 402 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 IGLL1P15814 213 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 CXCL2P19875 107 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 GLRXP35754 106 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 AKR1D1P51857 326 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 HERVK_113P61574 105 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 MRPS10P82664 201 aaKnown RBP2.61□□□□□ -1.99
NUP54-209ENST00000510569 HPCAP84074 193 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 ZNF266Q14584 549 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 TAF9Q16594 264 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 UBE2SQ16763 222 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 LTC4SQ16873 150 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 MORN2Q502X0 79 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 ATP6AP1LQ52LC2 224 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 ANKRD22Q5VYY1 191 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 STEAP4Q687X5 459 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 STRADAQ7RTN6 431 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 ZNF720Q7Z2F6 126 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 CROCCP2Q86T23 111 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 OR11H6Q8NGC7 330 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 OR4M1Q8NGD0 313 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 ZNF675Q8TD23 568 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 RXFP2Q8WXD0 754 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 MAGOHBQ96A72 148 aaKnown RBP2.61□□□□□ -1.99
NUP54-209ENST00000510569 TM4SF18Q96CE8 201 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 CCDC115Q96NT0 180 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 OR2A7Q96R45 310 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 HIST1H4GQ99525 98 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 KLF6Q99612 283 aaPredicted RBP2.61□□□□□ -1.99
NUP54-209ENST00000510569 TMEM70Q9BUB7 260 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 PBDC1Q9BVG4 233 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 ULBP3Q9BZM4 244 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 PRTFDC1Q9NRG1 225 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 SSR3Q9UNL2 185 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 YTHDF2Q9Y5A9 579 aaKnown RBP2.61□□□□□ -1.99
NUP54-209ENST00000510569 V9GY05 133 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 PTPRFP10586 1907 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 CHD5Q8TDI0 1954 aa2.61□□□□□ -1.99
NUP54-209ENST00000510569 COL11A1P12107 1806 aaPredicted RBP2.61□□□□□ -1.99
NUP54-209ENST00000510569 OTOFQ9HC10 1997 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 BPTFQ12830 3046 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 IGKV1D-13A0A0B4J2D9 117 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 A0A1B0GXF2 115 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 MYBPHLA2RUH7 354 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 RBFOX3A6NFN3 312 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 SIGLEC16A6NMB1 481 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 H3BSA7 217 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 H7C1C5 153 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 MRASO14807 208 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 MYL12BO14950 172 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 HCRTR1O43613 425 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 PDCD6O75340 191 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 ARL6IP5O75915 188 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 IGHMP01871 453 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 C1QAP02745 245 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 OR4A8P0C604 315 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 ZNF806P0C7X5 589 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 OR5H8P0DN80 308 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 IGKV1-13P0DP09 117 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 MUC1P15941 1255 aaPredicted RBP2.6□□□□□ -1.99
NUP54-209ENST00000510569 SPNP16150 400 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 ORM2P19652 201 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 PRTN3P24158 256 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 FMO3P31513 532 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 S100A11P31949 105 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 RPL35P42766 123 aaKnown RBP2.6□□□□□ -1.99
NUP54-209ENST00000510569 LCN6P62502 163 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 GNG5P63218 68 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 BIKQ13323 160 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 C1DQ13901 141 aaKnown RBP2.6□□□□□ -1.99
NUP54-209ENST00000510569 RGNQ15493 299 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 OR8G1Q15617 311 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 FAM201AQ5SY85 155 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 TSPO2Q5TGU0 170 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms