RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 DYRK1AQ13627 763 aa14.35□□□□□ -0.11
UBE3D-207ENST00000509102 FAM209BQ5JX69 171 aa14.35□□□□□ -0.11
UBE3D-207ENST00000509102 VAX1Q5SQQ9 334 aa14.35□□□□□ -0.11
UBE3D-207ENST00000509102 AADACL3Q5VUY0 350 aa14.35□□□□□ -0.11
UBE3D-207ENST00000509102 ZNF343Q6P1L6 599 aa14.35□□□□□ -0.11
UBE3D-207ENST00000509102 SSX9Q7RTT3 188 aa14.35□□□□□ -0.11
UBE3D-207ENST00000509102 ANKRD13BQ86YJ7 626 aa14.35□□□□□ -0.11
UBE3D-207ENST00000509102 OR4A5Q8NH83 315 aa14.35□□□□□ -0.11
UBE3D-207ENST00000509102 FYTTD1Q96QD9 318 aaKnown RBP14.35□□□□□ -0.11
UBE3D-207ENST00000509102 RSRP1Q9BUV0 290 aa14.35□□□□□ -0.11
UBE3D-207ENST00000509102 HRASLSQ9HDD0 168 aa14.35□□□□□ -0.11
UBE3D-207ENST00000509102 ZNF257Q9Y2Q1 563 aa14.35□□□□□ -0.11
UBE3D-207ENST00000509102 HPRT1P00492 218 aa14.34□□□□□ -0.11
UBE3D-207ENST00000509102 PMP2P02689 132 aa14.34□□□□□ -0.11
UBE3D-207ENST00000509102 S100GP29377 79 aa14.34□□□□□ -0.11
UBE3D-207ENST00000509102 TAS2R31P59538 309 aa14.34□□□□□ -0.11
UBE3D-207ENST00000509102 RPL8P62917 257 aaKnown RBP14.34□□□□□ -0.11
UBE3D-207ENST00000509102 ATP5G2Q06055 141 aa14.34□□□□□ -0.11
UBE3D-207ENST00000509102 RPEL1Q2QD12 228 aa14.34□□□□□ -0.11
UBE3D-207ENST00000509102 C10orf55Q5SWW7 151 aa14.34□□□□□ -0.11
UBE3D-207ENST00000509102 ZNF818PQ6ZRF7 136 aa14.34□□□□□ -0.11
UBE3D-207ENST00000509102 CMTM1Q8IZ96 169 aa14.34□□□□□ -0.11
UBE3D-207ENST00000509102 PUSL1Q8N0Z8 303 aaKnown RBP14.34□□□□□ -0.11
UBE3D-207ENST00000509102 TTC9CQ8N5M4 171 aa14.34□□□□□ -0.11
UBE3D-207ENST00000509102 NECAP1Q8NC96 275 aa14.34□□□□□ -0.11
UBE3D-207ENST00000509102 OR6F1Q8NGZ6 308 aa14.34□□□□□ -0.11
UBE3D-207ENST00000509102 OR51H1Q8NH63 302 aa14.34□□□□□ -0.11
UBE3D-207ENST00000509102 GPHA2Q96T91 129 aa14.34□□□□□ -0.11
UBE3D-207ENST00000509102 ZNF2Q9BSG1 426 aaPredicted RBP14.34□□□□□ -0.11
UBE3D-207ENST00000509102 SCPEP1Q9HB40 452 aa14.34□□□□□ -0.11
UBE3D-207ENST00000509102 LSM4Q9Y4Z0 139 aaKnown RBP14.34□□□□□ -0.11
UBE3D-207ENST00000509102 EIF4EP06730 217 aaKnown RBP14.33□□□□□ -0.12
UBE3D-207ENST00000509102 NHLRC4P0CG21 123 aaPredicted RBP14.33□□□□□ -0.12
UBE3D-207ENST00000509102 NQO2P16083 231 aa14.33□□□□□ -0.12
UBE3D-207ENST00000509102 RFX2P48378 723 aa14.33□□□□□ -0.12
UBE3D-207ENST00000509102 DHRS11Q6UWP2 260 aa14.33□□□□□ -0.12
UBE3D-207ENST00000509102 MOB3AQ96BX8 217 aa14.33□□□□□ -0.12
UBE3D-207ENST00000509102 BET1LQ9NYM9 111 aa14.33□□□□□ -0.12
UBE3D-207ENST00000509102 ANAPC10Q9UM13 185 aa14.33□□□□□ -0.12
UBE3D-207ENST00000509102 SMAD5-AS1Q9Y6J3 95 aa14.33□□□□□ -0.12
UBE3D-207ENST00000509102 FAM25AB3EWG3 89 aa14.32□□□□□ -0.12
UBE3D-207ENST00000509102 FAM25CB3EWG5 89 aa14.32□□□□□ -0.12
UBE3D-207ENST00000509102 FAM25GB3EWG6 89 aa14.32□□□□□ -0.12
UBE3D-207ENST00000509102 HLA-GP17693 338 aa14.32□□□□□ -0.12
UBE3D-207ENST00000509102 NAT1P18440 290 aa14.32□□□□□ -0.12
UBE3D-207ENST00000509102 BRWD1-AS2P59051 145 aa14.32□□□□□ -0.12
UBE3D-207ENST00000509102 ERVK-16P61578 105 aa14.32□□□□□ -0.12
UBE3D-207ENST00000509102 TSPAN5P62079 268 aa14.32□□□□□ -0.12
UBE3D-207ENST00000509102 DEFA5Q01523 94 aa14.32□□□□□ -0.12
UBE3D-207ENST00000509102 EXOSC2Q13868 293 aaKnown RBP14.32□□□□□ -0.12
UBE3D-207ENST00000509102 OR4A47Q6IF82 309 aa14.32□□□□□ -0.12
UBE3D-207ENST00000509102 DMBX1Q8NFW5 382 aa14.32□□□□□ -0.12
UBE3D-207ENST00000509102 OR9G4Q8NGQ1 327 aa14.32□□□□□ -0.12
UBE3D-207ENST00000509102 PLEKHA2Q9HB19 425 aa14.32□□□□□ -0.12
UBE3D-207ENST00000509102 AKIP1Q9NQ31 210 aa14.32□□□□□ -0.12
UBE3D-207ENST00000509102 SLC2A9Q9NRM0 540 aa14.32□□□□□ -0.12
UBE3D-207ENST00000509102 TNCP24821 2201 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 HMX3A6NHT5 357 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 NPIPB5A8MRT5 1133 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 GABARAPO95166 117 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 PRH1P02810 166 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 DEFA4P12838 97 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 GP9P14770 177 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 SPNP16150 400 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 HLA-DMAP28067 261 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 GNRHRP30968 328 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 RCVRNP35243 200 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 HRH1P35367 487 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 SYNJ2BPP57105 145 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 KLF5Q13887 457 aaPredicted RBP14.31□□□□□ -0.12
UBE3D-207ENST00000509102 LPCAT3Q6P1A2 487 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 SNX29P2Q8IUI4 249 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 MRPS26Q9BYN8 205 aaKnown RBP14.31□□□□□ -0.12
UBE3D-207ENST00000509102 COMMD5Q9GZQ3 224 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 COMMD9Q9P000 198 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 PEMTQ9UBM1 199 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 ADAM30Q9UKF2 790 aa14.31□□□□□ -0.12
UBE3D-207ENST00000509102 TRBV9A0A0B4J1U6 114 aa14.3□□□□□ -0.12
UBE3D-207ENST00000509102 HPGDSO60760 199 aa14.3□□□□□ -0.12
UBE3D-207ENST00000509102 RLN1P04808 185 aa14.3□□□□□ -0.12
UBE3D-207ENST00000509102 ZNF735P0CB33 412 aa14.3□□□□□ -0.12
UBE3D-207ENST00000509102 C15orf32Q32M92 178 aa14.3□□□□□ -0.12
UBE3D-207ENST00000509102 GPR107Q5VW38 600 aa14.3□□□□□ -0.12
UBE3D-207ENST00000509102 GPR141Q7Z602 305 aa14.3□□□□□ -0.12
UBE3D-207ENST00000509102 GPX8Q8TED1 209 aa14.3□□□□□ -0.12
UBE3D-207ENST00000509102 PLA2G2EQ9NZK7 142 aa14.3□□□□□ -0.12
UBE3D-207ENST00000509102 SORL1Q92673 2214 aa14.29□□□□□ -0.12
UBE3D-207ENST00000509102 TEX22C9J3V5 150 aa14.29□□□□□ -0.12
UBE3D-207ENST00000509102 GPR31O00270 319 aa14.29□□□□□ -0.12
UBE3D-207ENST00000509102 CYB5BO43169 146 aa14.29□□□□□ -0.12
UBE3D-207ENST00000509102 OR2J3O76001 311 aa14.29□□□□□ -0.12
UBE3D-207ENST00000509102 IL6RP08887 468 aaPredicted RBP14.29□□□□□ -0.12
UBE3D-207ENST00000509102 SMIM18P0DKX4 95 aa14.29□□□□□ -0.12
UBE3D-207ENST00000509102 HIST1H1BP16401 226 aaKnown RBP14.29□□□□□ -0.12
UBE3D-207ENST00000509102 ZNF182P17025 639 aaPredicted RBP14.29□□□□□ -0.12
UBE3D-207ENST00000509102 ELK1P19419 428 aa14.29□□□□□ -0.12
UBE3D-207ENST00000509102 POU2AF1Q16633 256 aa14.29□□□□□ -0.12
UBE3D-207ENST00000509102 C11orf87Q6NUJ2 197 aa14.29□□□□□ -0.12
UBE3D-207ENST00000509102 C15orf40Q8WUR7 153 aa14.29□□□□□ -0.12
UBE3D-207ENST00000509102 FBXL7Q9UJT9 491 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms