RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 MRPS10P82664 201 aaKnown RBP13.16□□□□□ -0.3
CLDND1-219ENST00000508659 ZNF616Q08AN1 781 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 C10orf55Q5SWW7 151 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 ASPHD1Q5U4P2 390 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 FOXB2Q5VYV0 432 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 OR5T1Q8NG75 326 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 FCAMRQ8WWV6 532 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 SPIN2AQ99865 258 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 SPIN2BQ9BPZ2 258 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 COA4Q9NYJ1 87 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 MTFP1Q9UDX5 166 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 PLXNB1O43157 2135 aa13.16□□□□□ -0.3
CLDND1-219ENST00000508659 IGHV3-11P01762 117 aa13.15□□□□□ -0.3
CLDND1-219ENST00000508659 IL18Q14116 193 aa13.15□□□□□ -0.3
CLDND1-219ENST00000508659 OR4A47Q6IF82 309 aa13.15□□□□□ -0.3
CLDND1-219ENST00000508659 LPCAT3Q6P1A2 487 aa13.15□□□□□ -0.3
CLDND1-219ENST00000508659 REC114Q7Z4M0 266 aa13.15□□□□□ -0.3
CLDND1-219ENST00000508659 PUSL1Q8N0Z8 303 aaKnown RBP13.15□□□□□ -0.3
CLDND1-219ENST00000508659 OR1N2Q8NGR9 330 aa13.15□□□□□ -0.3
CLDND1-219ENST00000508659 TMEM167AQ8TBQ9 72 aa13.15□□□□□ -0.3
CLDND1-219ENST00000508659 DIRAS2Q96HU8 199 aa13.15□□□□□ -0.3
CLDND1-219ENST00000508659 SLIRPQ9GZT3 109 aaKnown RBP13.15□□□□□ -0.3
CLDND1-219ENST00000508659 ALX4Q9H161 411 aaPredicted RBP13.15□□□□□ -0.3
CLDND1-219ENST00000508659 HRASLSQ9HDD0 168 aa13.15□□□□□ -0.3
CLDND1-219ENST00000508659 COMMD9Q9P000 198 aa13.15□□□□□ -0.3
CLDND1-219ENST00000508659 CEPT1Q9Y6K0 416 aa13.15□□□□□ -0.3
CLDND1-219ENST00000508659 GABARAPH6UMI1 98 aa13.14□□□□□ -0.31
CLDND1-219ENST00000508659 S1PR2O95136 353 aa13.14□□□□□ -0.31
CLDND1-219ENST00000508659 PRB2P02812 416 aaPredicted RBP13.14□□□□□ -0.31
CLDND1-219ENST00000508659 CD3DP04234 171 aa13.14□□□□□ -0.31
CLDND1-219ENST00000508659 NQO2P16083 231 aa13.14□□□□□ -0.31
CLDND1-219ENST00000508659 TAS2R19P59542 299 aa13.14□□□□□ -0.31
CLDND1-219ENST00000508659 ERVK-16P61578 105 aa13.14□□□□□ -0.31
CLDND1-219ENST00000508659 DGCR2P98153 550 aa13.14□□□□□ -0.31
CLDND1-219ENST00000508659 PHLDA2Q53GA4 152 aa13.14□□□□□ -0.31
CLDND1-219ENST00000508659 SLC38A6Q8IZM9 456 aa13.14□□□□□ -0.31
CLDND1-219ENST00000508659 OR4A5Q8NH83 315 aa13.14□□□□□ -0.31
CLDND1-219ENST00000508659 MCFD2Q8NI22 146 aa13.14□□□□□ -0.31
CLDND1-219ENST00000508659 PLEKHA2Q9HB19 425 aa13.14□□□□□ -0.31
CLDND1-219ENST00000508659 BET1LQ9NYM9 111 aa13.14□□□□□ -0.31
CLDND1-219ENST00000508659 RABL2AQ9UBK7 228 aaPredicted RBP13.14□□□□□ -0.31
CLDND1-219ENST00000508659 RABL2BQ9UNT1 228 aa13.14□□□□□ -0.31
CLDND1-219ENST00000508659 A0A0G2JLM5 398 aa13.13□□□□□ -0.31
CLDND1-219ENST00000508659 C13orf42A0A1B0GVH6 325 aa13.13□□□□□ -0.31
CLDND1-219ENST00000508659 LINC01619G3V211 115 aa13.13□□□□□ -0.31
CLDND1-219ENST00000508659 PGLYRP1O75594 196 aaPredicted RBP13.13□□□□□ -0.31
CLDND1-219ENST00000508659 OR9G9P0C7N8 305 aa13.13□□□□□ -0.31
CLDND1-219ENST00000508659 F2RP25116 425 aa13.13□□□□□ -0.31
CLDND1-219ENST00000508659 MAS1LP35410 378 aa13.13□□□□□ -0.31
CLDND1-219ENST00000508659 RPL27AP46776 148 aaKnown RBP13.13□□□□□ -0.31
CLDND1-219ENST00000508659 RPL8P62917 257 aaKnown RBP13.13□□□□□ -0.31
CLDND1-219ENST00000508659 SSBP1Q04837 148 aaKnown RBP13.13□□□□□ -0.31
CLDND1-219ENST00000508659 ARRDC1Q8N5I2 433 aa13.13□□□□□ -0.31
CLDND1-219ENST00000508659 ADAD2Q8NCV1 583 aaKnown RBP13.13□□□□□ -0.31
CLDND1-219ENST00000508659 DMBX1Q8NFW5 382 aa13.13□□□□□ -0.31
CLDND1-219ENST00000508659 SMIM4Q8WVI0 70 aa13.13□□□□□ -0.31
CLDND1-219ENST00000508659 TINAGL1Q9GZM7 467 aaPredicted RBP13.13□□□□□ -0.31
CLDND1-219ENST00000508659 TMEM140Q9NV12 185 aa13.13□□□□□ -0.31
CLDND1-219ENST00000508659 HLA-GP17693 338 aa13.12□□□□□ -0.31
CLDND1-219ENST00000508659 HOXD3P31249 432 aaPredicted RBP13.12□□□□□ -0.31
CLDND1-219ENST00000508659 UCP3P55916 312 aa13.12□□□□□ -0.31
CLDND1-219ENST00000508659 DEFA5Q01523 94 aa13.12□□□□□ -0.31
CLDND1-219ENST00000508659 POU2AF1Q16633 256 aa13.12□□□□□ -0.31
CLDND1-219ENST00000508659 TMEM229BQ8NBD8 167 aa13.12□□□□□ -0.31
CLDND1-219ENST00000508659 DGCR14Q96DF8 476 aaKnown RBP13.12□□□□□ -0.31
CLDND1-219ENST00000508659 FYTTD1Q96QD9 318 aaKnown RBP13.12□□□□□ -0.31
CLDND1-219ENST00000508659 RSRP1Q9BUV0 290 aa13.12□□□□□ -0.31
CLDND1-219ENST00000508659 AURKAIP1Q9NWT8 199 aaPredicted RBP13.12□□□□□ -0.31
CLDND1-219ENST00000508659 RSL24D1Q9UHA3 163 aaKnown RBP13.12□□□□□ -0.31
CLDND1-219ENST00000508659 IGHV4OR15-8A0A075B7B6 117 aa13.11□□□□□ -0.31
CLDND1-219ENST00000508659 A0A087WW49 117 aa13.11□□□□□ -0.31
CLDND1-219ENST00000508659 DPPA5A6NC42 116 aa13.11□□□□□ -0.31
CLDND1-219ENST00000508659 MARCH11A6NNE9 402 aa13.11□□□□□ -0.31
CLDND1-219ENST00000508659 SEC14L6B5MCN3 397 aa13.11□□□□□ -0.31
CLDND1-219ENST00000508659 BRI3O95415 125 aa13.11□□□□□ -0.31
CLDND1-219ENST00000508659 PGAM2P15259 253 aa13.11□□□□□ -0.31
CLDND1-219ENST00000508659 PPP5CP53041 499 aa13.11□□□□□ -0.31
CLDND1-219ENST00000508659 TBC1D26Q86UD7 250 aa13.11□□□□□ -0.31
CLDND1-219ENST00000508659 SLC25A42Q86VD7 318 aa13.11□□□□□ -0.31
CLDND1-219ENST00000508659 SLC2A9Q9NRM0 540 aa13.11□□□□□ -0.31
CLDND1-219ENST00000508659 DNAH3Q8TD57 4116 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 NOTCH3Q9UM47 2321 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 HMX3A6NHT5 357 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 TEX22C9J3V5 150 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 CTDSPLO15194 276 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 RAB3DO95716 219 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 CD74P04233 296 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 RPA2P15927 270 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 EGFEM1PQ0D2K5 195 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 MEF2DQ14814 521 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 SCGB2B2Q4G0G5 96 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 C9orf66Q5T8R8 295 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 STEAP1BQ6NZ63 245 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 OR4D10Q8NGI6 311 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 MRAPQ8TCY5 172 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 USMG5Q96IX5 58 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 COMMD5Q9GZQ3 224 aa13.1□□□□□ -0.31
CLDND1-219ENST00000508659 RBM38Q9H0Z9 239 aaKnown RBP13.1□□□□□ -0.31
CLDND1-219ENST00000508659 PRKDCP78527 4128 aaKnown RBP13.09□□□□□ -0.31
CLDND1-219ENST00000508659 FAM223BA6NKX1 122 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms