RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 GRPRP30550 384 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 GCH1P30793 250 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 PTGER4P35408 488 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 TIMP3P35625 211 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 ZNF93P35789 620 aaPredicted RBP3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 CXCL12P48061 93 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 HINT1P49773 126 aaPredicted RBP3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 ASCL1P50553 236 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 RAB9AP51151 201 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 SNU13P55769 128 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 DCAF7P61962 342 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 NTHL1P78549 312 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 ZFP36L1Q07352 338 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 HIST2H2BCQ6DN03 193 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 LCN10Q6JVE6 187 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 SLC25A34Q6PIV7 304 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 UNQ5815/PRO19632Q6UWF5 114 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 FOXL2NBQ6ZUU3 175 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 MEX3DQ86XN8 651 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 CALHM1Q8IU99 346 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 OR4N5Q8IXE1 308 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 TMEM252Q8N6L7 170 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 ZIC4Q8N9L1 334 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 C5orf17Q8NAS9 161 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 OR51T1Q8NGJ9 327 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 OR5C1Q8NGR4 320 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 OR13G1Q8NGZ3 307 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 MRPL30Q8TCC3 161 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 LHX4Q969G2 390 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 C18orf12Q96KH6 178 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 POM121L2Q96KW2 1035 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 RASL10BQ96S79 203 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 SDF2Q99470 211 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 GPER1Q99527 375 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 FAM110AQ9BQ89 295 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 WDR61Q9GZS3 305 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 SH3BGRL3Q9H299 93 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 ELOVL3Q9HB03 270 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 MMP25Q9NPA2 562 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 NRN1Q9NPD7 142 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 G6PC2Q9NQR9 355 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 C20orf141Q9NUB4 165 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 SLC39A9Q9NUM3 307 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 TAS2R4Q9NYW5 299 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 RABAC1Q9UI14 185 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 VDAC3Q9Y277 283 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 RCL1Q9Y2P8 373 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 KLHDC2Q9Y2U9 406 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 C2orf16Q68DN1 1984 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 ACACAQ13085 2346 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 DOPEY1Q5JWR5 2465 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 PCNX2A6NKB5 2137 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 PIKFYVEQ9Y2I7 2098 aa3.79□□□□□ -1.8
PDLIM5-211ENST00000508531 F5P12259 2224 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 PLXNB3Q9ULL4 1909 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 PLXNA2O75051 1894 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 NBPF19A0A087WUL8 3843 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 LOC107986453A0A1B0GWG9 222 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 PSMB11A5LHX3 300 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 SLC22A20A6NK97 555 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 H3BRM9 83 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 K7EP34 96 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 K7EQM0 130 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 MLNRO43193 412 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 ADAM20O43506 726 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 ZG16O60844 167 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 ZNF324O75467 553 aaPredicted RBP3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 TRAPPC6AO75865 159 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 SERF1AO75920 110 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 MT-ATP6P00846 226 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 OR5AL1P0C617 328 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 CT45A6P0DMU7 189 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 CT45A5P0DMU8 189 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 CT45A7P0DMV0 189 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 VDAC1P21796 283 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 OMGP23515 440 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 CRYBA4P53673 196 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 HERV-K104P61576 105 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 ARG2P78540 354 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 CCL20P78556 96 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 QRFPP83859 136 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 RUNX1Q01196 453 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 HSD52Q0P140 79 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 TMEM187Q14656 261 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 MEP1BQ16820 701 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 HLA-DRB5Q30154 266 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 CT45A1Q5HYN5 189 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 FFAR4Q5NUL3 377 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 PHYHD1Q5SRE7 291 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 SPATA46Q5T0L3 261 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 PRAMEF5Q5TYX0 476 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 FAM78BQ5VT40 261 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 PRAMEF6Q5VXH4 476 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 AMMECR1LQ6DCA0 310 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 CBLN3Q6UW01 205 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 NEGR1Q7Z3B1 354 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 LYPD6Q86Y78 171 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 SELENOHQ8IZQ5 122 aaKnown RBP3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 TMEM123Q8N131 208 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 GVQW1Q8N7I0 195 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms