RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 FAM90A27PA6NNH2 459 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 HSBP1O75506 76 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 OR7C1O76099 320 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 OR5AL1P0C617 328 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 SMIM13P0DJ93 91 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 ORM2P19652 201 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 G6PCP35575 357 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 PARM1Q6UWI2 310 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 FAM19A5Q7Z5A7 132 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 ODF3L1Q8IXM7 274 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 SHISA5Q8N114 240 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 SCGB1C1Q8TD33 95 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 WIPF2Q8TF74 440 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 SOCS4Q8WXH5 440 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 BADQ92934 168 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 NAT6Q93015 286 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 TTTY10Q9BZA0 68 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 TMEM14DPA8MWL7 114 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 BMPR1BO00238 502 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 APOA2P02652 100 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 APCSP02743 223 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 GYPBP06028 91 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 GLRXP35754 106 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 PSMG4Q5JS54 123 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 ZNF683Q8IZ20 524 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 TMEM178AQ8NBL3 297 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 OR1F12Q8NHA8 337 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 ENY2Q9NPA8 101 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 WSB2Q9NYS7 404 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 EMC9Q9Y3B6 208 aa9.04□□□□□ -0.96
PDLIM5-210ENST00000508216 IGLV3-10A0A075B6K4 115 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 CTXND1A0A1B0GTU2 59 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 PRSS29PA6NIE9 313 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 TNFSF12O43508 249 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 ANGPTL7O43827 346 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 PI3P19957 117 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 PPIFP30405 207 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 ASIPP42127 132 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 DLX6P56179 175 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 UNC119Q13432 240 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 FHL1Q13642 323 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 CEACAM16Q2WEN9 425 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 MEIG1Q5JSS6 88 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 TMEM219Q86XT9 240 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 ZNF695Q8IW36 515 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 OR10G7Q8NGN6 311 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 LMX1AQ8TE12 382 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 RASL10AQ92737 203 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 LHX4Q969G2 390 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 SSBP3Q9BWW4 388 aaPredicted RBP9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 PDFQ9HBH1 243 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 ARL2-SNX15V9GYD0 113 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 DOCK9Q9BZ29 2069 aa9.03□□□□□ -0.96
PDLIM5-210ENST00000508216 PAPPA2Q9BXP8 1791 aa9.02□□□□□ -0.96
PDLIM5-210ENST00000508216 A0A1W2PPI3 338 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 SHISA7A6NL88 538 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 TUSC2O75896 110 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 DHRS3O75911 302 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 APOMO95445 188 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 SLC25A5P05141 298 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 KIR2DS2P43631 304 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 NKX2-1P43699 371 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 ZNF136P52737 540 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 GAGE2BQ13066 116 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 TRIP6Q15654 476 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 GAGE13Q4V321 117 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 GAGE2EQ4V326 116 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 FAM120AOSQ5T036 256 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 PRSS41Q7RTY9 318 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 OR13A1Q8NGR1 328 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 H1FXQ92522 213 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 ST6GALNAC6Q969X2 333 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 DUX3Q96PT4 197 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 GPX7Q96SL4 187 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 LINC01587Q99440 93 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 KCNIP2Q9NS61 270 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 GAGE2DQ9UEU5 116 aa9.02□□□□□ -0.97
PDLIM5-210ENST00000508216 NDUFB2O95178 105 aa9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 RHOCP08134 193 aa9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 PIRTP0C851 137 aa9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 AMY2BP19961 511 aa9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 ACRV1P26436 265 aa9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 FCGR2BP31994 310 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 IER3P46695 156 aa9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 RPL31P62899 125 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 C1orf140Q5VVS0 124 aa9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 ZNF841Q6ZN19 808 aa9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 OR9G1Q8NH87 305 aa9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 GRAPLQ8TC17 118 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 PHLDA1Q8WV24 401 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 TMEM101Q96IK0 257 aa9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 SGK494Q96LW2 274 aa9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 PRELID3AQ96N28 172 aa9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 S1PR5Q9H228 398 aa9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 SAP30LQ9HAJ7 183 aa9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 SLC39A9Q9NUM3 307 aa9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 YTHDF2Q9Y5A9 579 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 PIGBOS1A0A0B4J2F0 54 aa9.01□□□□□ -0.97
PDLIM5-210ENST00000508216 C9JAW5 83 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms