RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 TMEM219Q86XT9 240 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 STPG2Q8N412 459 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 C3orf56Q8N813 242 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 OR51H1Q8NH63 302 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 RBPMSQ93062 196 aaKnown RBP6.7□□□□□ -1.34
PDGFC-205ENST00000506880 LSM10Q969L4 123 aaKnown RBP6.7□□□□□ -1.34
PDGFC-205ENST00000506880 C5orf30Q96GV9 206 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 TMEM56Q96MV1 263 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 CITED1Q99966 193 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 NAA60Q9H7X0 242 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 TMEM56-RWDD3S4R434 201 aa6.7□□□□□ -1.34
PDGFC-205ENST00000506880 TET2Q6N021 2002 aaPredicted RBP6.69□□□□□ -1.34
PDGFC-205ENST00000506880 IGHV7-81A0A0B4J1V7 117 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 IGHV3-72A0A0B4J1Y9 119 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 A0A0B4J2A0 478 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 TEX13DA0A0J9YY54 714 aaPredicted RBP6.69□□□□□ -1.34
PDGFC-205ENST00000506880 SNAPC5O75971 98 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 RLN1P04808 185 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 F2RL1P55085 397 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 RAB25P57735 213 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 RPL30P62888 115 aaKnown RBP6.69□□□□□ -1.34
PDGFC-205ENST00000506880 BAK1Q16611 211 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 PDLIM3Q53GG5 364 aaPredicted RBP6.69□□□□□ -1.34
PDGFC-205ENST00000506880 C5orf24Q7Z6I8 188 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 NDUFA11Q86Y39 141 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 CENPSQ8N2Z9 138 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 DRAXINQ8NBI3 349 aaPredicted RBP6.69□□□□□ -1.34
PDGFC-205ENST00000506880 MINDY2Q8NBR6 621 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 OR4D10Q8NGI6 311 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 OR52E5Q8NH55 327 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 MARCH1Q8TCQ1 289 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 ARPC1AQ92747 370 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 RRNAD1Q96FB5 475 aaKnown RBP6.69□□□□□ -1.34
PDGFC-205ENST00000506880 CYYR1Q96J86 154 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 DUX5Q96PT3 197 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 RTBDNQ9BSG5 229 aaPredicted RBP6.69□□□□□ -1.34
PDGFC-205ENST00000506880 C5orf66Q9H5L9 145 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 SHPKQ9UHJ6 478 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 NUBP2Q9Y5Y2 271 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 FBN3Q75N90 2809 aa6.69□□□□□ -1.34
PDGFC-205ENST00000506880 A0A0G2JLM5 398 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 A0A1W2PN81 502 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 PSMB11A5LHX3 300 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 NPIPB5A8MRT5 1133 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 FAM90A26D6RGX4 464 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 SLC25A17O43808 307 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 PRAF2O60831 178 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 SAA1P0DJI8 122 aaPredicted RBP6.68□□□□□ -1.34
PDGFC-205ENST00000506880 HIST1H1BP16401 226 aaKnown RBP6.68□□□□□ -1.34
PDGFC-205ENST00000506880 HLA-GP17693 338 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 CHRNA7P36544 502 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 BRWD1-AS2P59051 145 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 BLCAPP62952 87 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 CX3CL1P78423 397 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 RUNX1Q01196 453 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 CFHR3Q02985 330 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 HNF4GQ14541 408 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 C2orf68Q2NKX9 166 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 ZNF585BQ52M93 769 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 C19orf54Q5BKX5 351 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 CXorf66Q5JRM2 361 aaPredicted RBP6.68□□□□□ -1.34
PDGFC-205ENST00000506880 GLDNQ6ZMI3 551 aaPredicted RBP6.68□□□□□ -1.34
PDGFC-205ENST00000506880 H2BFWTQ7Z2G1 175 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 CENPVQ7Z7K6 275 aaPredicted RBP6.68□□□□□ -1.34
PDGFC-205ENST00000506880 NOXA1Q86UR1 476 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 LGI3Q8N145 548 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 DUSP18Q8NEJ0 188 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 DMBX1Q8NFW5 382 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 OR1L8Q8NGR8 309 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 MRGPRFQ96AM1 343 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 R3HDM4Q96D70 268 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 SEC22AQ96IW7 307 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 USMG5Q96IX5 58 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 COMMD5Q9GZQ3 224 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 TMEM14BQ9NUH8 114 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 FOXA2Q9Y261 457 aaPredicted RBP6.68□□□□□ -1.34
PDGFC-205ENST00000506880 TMED3Q9Y3Q3 217 aa6.68□□□□□ -1.34
PDGFC-205ENST00000506880 TSSC4Q9Y5U2 329 aaPredicted RBP6.68□□□□□ -1.34
PDGFC-205ENST00000506880 WNK1Q9H4A3 2382 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 TENM1Q9UKZ4 2725 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 TRAV41A0A0B4J266 112 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 FAM240BA0A1B0GVZ2 78 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 C15orf61A6NNL5 157 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 SRRM4A7MD48 611 aaKnown RBP6.67□□□□□ -1.34
PDGFC-205ENST00000506880 M0QZ24 198 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 UPK2O00526 184 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 FBXO24O75426 580 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 SCAF4O95104 1147 aaKnown RBP6.67□□□□□ -1.34
PDGFC-205ENST00000506880 CNIH1O95406 144 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 DUS4LO95620 317 aaKnown RBP6.67□□□□□ -1.34
PDGFC-205ENST00000506880 IGLV1-40P01703 118 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 VSIG10L2P0DP72 767 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 MDKP21741 143 aaPredicted RBP6.67□□□□□ -1.34
PDGFC-205ENST00000506880 CD24P25063 80 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 PSMB8P28062 276 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 PPIFP30405 207 aaKnown RBP6.67□□□□□ -1.34
PDGFC-205ENST00000506880 LPAR6P43657 344 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 CDX1P47902 265 aaPredicted RBP6.67□□□□□ -1.34
PDGFC-205ENST00000506880 CD83Q01151 205 aa6.67□□□□□ -1.34
PDGFC-205ENST00000506880 FXYD3Q14802 87 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms