RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 C1orf109Q9NX04 203 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 STX18Q9P2W9 335 aaKnown RBP3.32□□□□□ -1.88
HERC4-213ENST00000506515 UTP11Q9Y3A2 253 aaKnown RBP3.32□□□□□ -1.88
HERC4-213ENST00000506515 CBY1Q9Y3M2 126 aa3.32□□□□□ -1.88
HERC4-213ENST00000506515 IGHV3-49A0A0A0MS15 119 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 LOC100653049A0A140TA62 436 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 GMNCA6NCL1 334 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 H3BN98 237 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 PLIN3O60664 434 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 KRT34O76011 436 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 AHSA1O95433 338 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 SNAP29O95721 258 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 RPS17P08708 135 aaKnown RBP3.31□□□□□ -1.88
HERC4-213ENST00000506515 FBP1P09467 338 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 SRMP19623 302 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 MSR1P21757 451 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 APLNRP35414 380 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 PMS2P3Q13401 168 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 IGFL1Q6UW32 110 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 TMPRSS11AQ6ZMR5 421 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 VTCN1Q7Z7D3 282 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 TRIML2Q8N7C3 387 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 ZIC4Q8N9L1 334 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 DEFB108BQ8NET1 73 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 OR5T1Q8NG75 326 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 RTN4IP1Q8WWV3 396 aaPredicted RBP3.31□□□□□ -1.88
HERC4-213ENST00000506515 YIPF5Q969M3 257 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 SLC35B4Q969S0 331 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 RMI2Q96E14 147 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 PPP3R2Q96LZ3 170 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 C18orf15Q96N68 181 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 TEAD3Q99594 435 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 RBFOX1Q9NWB1 397 aaKnown RBP3.31□□□□□ -1.88
HERC4-213ENST00000506515 CALML5Q9NZT1 146 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 ZNF257Q9Y2Q1 563 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 NOP16Q9Y3C1 178 aaKnown RBP3.31□□□□□ -1.88
HERC4-213ENST00000506515 USH1CQ9Y6N9 552 aa3.31□□□□□ -1.88
HERC4-213ENST00000506515 C17orf51A8MQB3 221 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 CENPBD1B2RD01 187 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 ENSAO43768 121 aaKnown RBP3.3□□□□□ -1.88
HERC4-213ENST00000506515 CYB5R3P00387 301 aaPredicted RBP3.3□□□□□ -1.88
HERC4-213ENST00000506515 DBIP07108 87 aaKnown RBP3.3□□□□□ -1.88
HERC4-213ENST00000506515 SNRPAP09012 282 aaKnown RBP3.3□□□□□ -1.88
HERC4-213ENST00000506515 ZNF14P17017 642 aaPredicted RBP3.3□□□□□ -1.88
HERC4-213ENST00000506515 CFHR2P36980 270 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 CRATP43155 626 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 PAFAH1B2P68402 229 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 ZNF616Q08AN1 781 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 OR1Q1Q15612 314 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 CEACAM16Q2WEN9 425 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 ZNF678Q5SXM1 525 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 C1orf140Q5VVS0 124 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 UNQ9165/PRO28630Q6UXU0 137 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 LINC00336Q6ZUF6 198 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 SLC30A8Q8IWU4 369 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 SLC30A7Q8NEW0 376 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 WFDC9Q8NEX5 89 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 OR8B3Q8NGG8 313 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 OR5L1Q8NGL2 311 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 TCP10LQ8TDR4 215 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 TRNT1Q96Q11 434 aaKnown RBP3.3□□□□□ -1.88
HERC4-213ENST00000506515 OR7D2Q96RA2 312 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 OR8B2Q96RD0 313 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 BCL7BQ9BQE9 202 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 EBPLQ9BY08 206 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 TMEM106BQ9NUM4 274 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 SNX12Q9UMY4 172 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 SIGLEC9Q9Y336 463 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 S4R3C0 116 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 ARHGAP32A7KAX9 2087 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 BIRC6Q9NR09 4857 aa3.3□□□□□ -1.88
HERC4-213ENST00000506515 FTCDNL1E5RQL4 147 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 TRAPPC2LH3BP13 241 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 M0R1X1 148 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 PHYHO14832 338 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 BANF1O75531 89 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 TRBV12-3P01733 135 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 NQO1P15559 274 aaKnown RBP3.29□□□□□ -1.88
HERC4-213ENST00000506515 SRP9P49458 86 aaKnown RBP3.29□□□□□ -1.88
HERC4-213ENST00000506515 UBE2E1P51965 193 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 PCBD1P61457 104 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 TNFAIP6P98066 277 aaPredicted RBP3.29□□□□□ -1.88
HERC4-213ENST00000506515 UAP1Q16222 522 aaPredicted RBP3.29□□□□□ -1.88
HERC4-213ENST00000506515 DEFB112Q30KQ8 113 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 CCDC153Q494R4 210 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 CLEC6AQ6EIG7 209 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 NDUFA11Q86Y39 141 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 C20orf196Q8IYI0 205 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 SLC22A24Q8N4F4 322 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 DRAM1Q8N682 238 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 ZNF283Q8N7M2 679 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 TMEM104Q8NE00 496 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 OR4C13Q8NGP0 309 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 ROPN1LQ96C74 230 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 UBE2E2Q96LR5 201 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 B9D2Q9BPU9 175 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 SCRT1Q9BWW7 348 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 CDCA4Q9BXL8 241 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 ULBP2Q9BZM5 246 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms