RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 MIC13Q5XKP0 118 aa11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 RNASEKQ6P5S7 137 aaKnown RBP11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 ZNF808Q8N4W9 903 aaPredicted RBP11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 OR4P4Q8NGL7 312 aa11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 A0A087X0K7 114 aa11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 SNAI2O43623 268 aa11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 GNG7O60262 68 aa11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 MGST1P10620 155 aaKnown RBP11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 DEFB133Q30KQ1 61 aa11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 SMIM21Q3B7S5 101 aa11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 STPG3Q8N7X2 389 aa11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 NFAM1Q8NET5 270 aaPredicted RBP11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 TSTD1Q8NFU3 115 aa11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 C18orf32Q8TCD1 76 aa11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 NCOR1O75376 2440 aa11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 APCSP02743 223 aa11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 ARL4DP49703 201 aa11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 CX3CL1P78423 397 aa11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 PQLC2Q6ZP29 291 aa11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 DEFB125Q8N687 156 aa11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 FNDC4Q9H6D8 234 aaPredicted RBP11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 TECRQ9NZ01 308 aaKnown RBP11.84□□□□□ -0.51
COL6A4P2-202ENST00000504443 M0R1X1 148 aa11.83□□□□□ -0.52
COL6A4P2-202ENST00000504443 GABRG2P18507 467 aa11.83□□□□□ -0.52
COL6A4P2-202ENST00000504443 FGF12P61328 243 aa11.83□□□□□ -0.52
COL6A4P2-202ENST00000504443 UBE2G1P62253 170 aa11.83□□□□□ -0.52
COL6A4P2-202ENST00000504443 DRAM1Q8N682 238 aa11.83□□□□□ -0.52
COL6A4P2-202ENST00000504443 DEFB119Q8N690 84 aa11.83□□□□□ -0.52
COL6A4P2-202ENST00000504443 SSMEM1Q8WWF3 244 aa11.83□□□□□ -0.52
COL6A4P2-202ENST00000504443 MYF5P13349 255 aa11.83□□□□□ -0.52
COL6A4P2-202ENST00000504443 KIAA0895LQ68EN5 471 aa11.83□□□□□ -0.52
COL6A4P2-202ENST00000504443 SLC23A3Q6PIS1 610 aa11.83□□□□□ -0.52
COL6A4P2-202ENST00000504443 LINC00173Q6ZV60 143 aa11.83□□□□□ -0.52
COL6A4P2-202ENST00000504443 FER1L6-AS1Q8NA97 138 aa11.83□□□□□ -0.52
COL6A4P2-202ENST00000504443 OR1N2Q8NGR9 330 aa11.83□□□□□ -0.52
COL6A4P2-202ENST00000504443 OR8B2Q96RD0 313 aa11.83□□□□□ -0.52
COL6A4P2-202ENST00000504443 SSBP3Q9BWW4 388 aaPredicted RBP11.83□□□□□ -0.52
COL6A4P2-202ENST00000504443 PRDM6Q9NQX0 595 aa11.83□□□□□ -0.52
COL6A4P2-202ENST00000504443 H0Y8G0 127 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 CA6P23280 308 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 RPL8P62917 257 aaKnown RBP11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 CFHR1Q03591 330 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 ANKRD37Q7Z713 158 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 NHLRC2Q8NBF2 726 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 OR1B1Q8NGR6 318 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 RNF138Q8WVD3 245 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 HES4Q9HCC6 221 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 R4GN57 208 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 TRAV9-1A0A075B6T8 112 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 TRAV24A0A0B4J272 114 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 A0A1B0GX78 115 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 LRP5LA4QPB2 252 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 OR4C46A6NHA9 309 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 LRRC30A6NM36 301 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 C2CD4DB7Z1M9 353 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 OR7C2O60412 319 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 PPOXP50336 477 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 RPL30P62888 115 aaKnown RBP11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 GABRA6Q16445 453 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 CENPWQ5EE01 88 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 OR2T6Q8NHC8 308 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 CHRDL1Q9BU40 450 aa11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 LIN7CQ9NUP9 197 aaKnown RBP11.82□□□□□ -0.52
COL6A4P2-202ENST00000504443 TRBV9A0A0B4J1U6 114 aa11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 C2orf70A6NJV1 201 aa11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 TRAPPC2LH3BP13 241 aa11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 USF1P22415 310 aaPredicted RBP11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 CD1BP29016 333 aa11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 RHOBP62745 196 aa11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 ZNF718Q3SXZ3 478 aa11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 FAM71F2Q6NXP2 309 aa11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 WDR73Q6P4I2 378 aa11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 FAM168AQ92567 244 aa11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 SSBP4Q9BWG4 385 aaPredicted RBP11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 ZDBF2Q9HCK1 2354 aa11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 IGHV3-64DA0A0J9YX35 117 aa11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 IGHV3-9P01782 118 aa11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 SRSF7Q16629 238 aaKnown RBP eCLIP11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 WDR74Q6RFH5 385 aaPredicted RBP11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 OR8B3Q8NGG8 313 aa11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 TNFRSF14Q92956 283 aa11.81□□□□□ -0.52
COL6A4P2-202ENST00000504443 REG1AP05451 166 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 LINC00869P0C866 280 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 IGLC1P0CG04 106 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 CRYBB3P26998 211 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 RPS20P60866 119 aaKnown RBP11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 TBR1Q16650 682 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 SMRP1Q8NCR6 262 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 WFDC12Q8WWY7 111 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 GAGE10A6NGK3 116 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 LILRA5A6NI73 299 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 CGAP01215 116 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 AMY1AP04745 511 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 CD24P25063 80 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 LGALS7P47929 136 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 UQCRFS1P47985 274 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 GNG4P50150 75 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 SPACA3Q8IXA5 215 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 PMCHL2Q9BQD1 86 aa11.8□□□□□ -0.52
COL6A4P2-202ENST00000504443 PPIAL4DF5H284 164 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms